SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16306
Pre Gene Modal
BGIBMGA013771
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_A-kinase_anchor_protein_13_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.57
 

Sequence

CDS
ATGAACTTATATTTAAATAAAAAAAGCTTGTCTGGCGCCGGTGAGAGCGAGACGGAAAGCGACGAAGACGCTTCCGCCGCGACTGTCGGGGCCACGGCACAACTGCCCGGCCGCAGGAACAATACGCATCAGGAACATTTGGGATTACATCGACTGGCTTTCTTGGAACAAGCTGCTTTTGACCATCACGCTGAGAAAAGGCGAAAACGTGGAAGCTTGTTCTTCAGGAAGAAGAAGGACAAGTCCCGGAAGGCGGCGCACGCGTGGCAGGCGGGCGGCGGCGCGCACTGCGACTGGTGCTCGCGACCCCTCAACGACACGCCCGCCCTCTACTGCGACAATTGTGGAACAACTGTACATCAAAATATTTGCAAAGATTACATCGTCGATTGCAATAAGCCTAAGTCGTCTAAGACATCTGTTGGTAAATCACTGAGTGCAGCCAGCGGGAAAAGCAGCAAACGGAGCTCCGTATCCGGACAGTCGCAGACTAATAGCACCAGTCATATTTATAACGACGACAAGGATTCAGATCATAAACACGACCAGAGCAACGCTTCGGACGACGCGTGCGCCGCGGAGTGGCCCGAGGTGTATCTGGGCCCCGAGCAGCTGGGCGACGAGGCGCTGGTGCTGGGGCTGGGCGCCAGCGAGCCCGACACCTGGGCGGCCGGCGCTCCCAAGGGACTCGCCAAGTCGCTCGGCGAAAGAGAGACGAAGCGACAAGAACACATTTACGAGCTGATACTCACGGAGAAGCATCACTGTCTCACCATACGACTTATGCAAAAGATGTTTGCTGACGGCATGGTGCGGTTCGGCAGCGTGAGCTCGGCGCAGGTGGCGCGCATGTTCCCGCGCGTGGACGAGCTGTGGGCGCTGCACGCGGCGCTGCTGGCCCGCCTGCGCGCCCGCCAGCGCGCCGCGCCCGCCGTGCCCTCCATCGCCGACATCCTGGCCGACGCCTTCGCGCCGCACTCCCGCCCGCGCCTCAAGTCCGCCTACGGCGAGTTTTGCTCCCGTCACCGCGACGCCGTGGAGGTGTTTAAGGAGTGCTGCGCGAGAGACGCCCGCCTGTCCCGGTTCATCAGGAAGTGCCAACAGAACCCTTTGCTCAGGAAGAAGGGTGTTCCCGAGTGCGTGCTGTTCGTAGCGCAGCGACTCACCAAGTACCCGCTGCTGCTGGAGCCTCTACTCAAGACGGCCGGCGATGACGTCAACGAACGTGAGCTGCTGCAGAAGGCGCTCTGCGGAGTCAAGGAGATCCTAGTGGATGTAGACAACCAGGTGGCGGCGAAGGAGCGCGAGGACCGCAAGCTCGAGATCTACCACCGCATCGACGCCAAGTCCTTCGCTCACTTCCGCGGCAGGAAGTTCAAGAAGAGCGACATACTGCAGGGCACCAGGAGCTTAAAGTTTGAAGGTGTGGCCACACTGATGCAAGGCCGCAGCAAGATGCAAACCCTACTGGTGATCGTGCTCTCCGACGTGCTGTTCTTCCTGCACGACAACAACAATAAATACACGTTCTTCACGCCCGACAATAAAACCGGTGTCGTGTCTCTCGTGAAGCTACTGGTCCGCGAGAAGGCGGGTGCTGAAGGCAGGGGCTTGTATCTGATCTGCAGCGGCCCCAACGAACCAGAAATGTTCGAGCTGCGAGTTCACAGGCCTAAGGATATACAGACTTGGATACAGGCCATAAGAGCCGCAGTCCAGAACTGCCCTGAGGAGGTGGAAGAGACCGAGGCAGGGCTGTTGGCTACCTCCGCGGAGGAGAGACAACGCCAGCTGGAAGCCAGACACGAGAATATAAGACTGATCACAGAAGCGTTAAGGACAAAAGACAAGGAGCTAGCGACACTCCTTGAAGAAAAATTGGCGCTGCACATGAAGATGGTGGGCCACACCGGAACCTCTACGCTGGACGTGCCTCACACGGGACTAAACACGTCATCGCCCGGGGGCTTGGTGTTTCCAGACTACGTGAGGCTGGTGGCGCCATCTATAGATTCGCATACAATATGGCAGGAAGTTTGTCGCGTTGTCAAGGAGGCGCTGGAGAGTGCTGGGTGCGCGTGGGGCGGCGCCCTGGGCCGCAGCACCAGCTCGGCGGGCGAGCGGCACTCCGCCGCCTACACCAGCCCCGCGCTGCCGCGCCGCGCCGACACCTTCGCGGGGTTCGACGCCACCAAGCACAGGGGTCTCGTGCACTGCTCTCGATAA
Protein
MNLYLNKKSLSGAGESETESDEDASAATVGATAQLPGRRNNTHQEHLGLHRLAFLEQAAFDHHAEKRRKRGSLFFRKKKDKSRKAAHAWQAGGGAHCDWCSRPLNDTPALYCDNCGTTVHQNICKDYIVDCNKPKSSKTSVGKSLSAASGKSSKRSSVSGQSQTNSTSHIYNDDKDSDHKHDQSNASDDACAAEWPEVYLGPEQLGDEALVLGLGASEPDTWAAGAPKGLAKSLGERETKRQEHIYELILTEKHHCLTIRLMQKMFADGMVRFGSVSSAQVARMFPRVDELWALHAALLARLRARQRAAPAVPSIADILADAFAPHSRPRLKSAYGEFCSRHRDAVEVFKECCARDARLSRFIRKCQQNPLLRKKGVPECVLFVAQRLTKYPLLLEPLLKTAGDDVNERELLQKALCGVKEILVDVDNQVAAKEREDRKLEIYHRIDAKSFAHFRGRKFKKSDILQGTRSLKFEGVATLMQGRSKMQTLLVIVLSDVLFFLHDNNNKYTFFTPDNKTGVVSLVKLLVREKAGAEGRGLYLICSGPNEPEMFELRVHRPKDIQTWIQAIRAAVQNCPEEVEETEAGLLATSAEERQRQLEARHENIRLITEALRTKDKELATLLEEKLALHMKMVGHTGTSTLDVPHTGLNTSSPGGLVFPDYVRLVAPSIDSHTIWQEVCRVVKEALESAGCAWGGALGRSTSSAGERHSAAYTSPALPRRADTFAGFDATKHRGLVHCSR

Summary

EMBL
RSAL01000029    RVE51749.1    KQ459166    KPJ03581.1    BABH01025308    BABH01025309    + More
BABH01025310    NWSH01003367    PCG66454.1    PCG66450.1    PCG66452.1    PCG66451.1    PCG66449.1    PCG66453.1    KZ150264    PZC71710.1    GEZM01012049    JAV93243.1    GEZM01012052    JAV93240.1    GEZM01012046    JAV93246.1    GEZM01012050    JAV93242.1    GEZM01012053    JAV93239.1    GEZM01012045    JAV93247.1    GEZM01012044    JAV93248.1    GEZM01012047    JAV93245.1    NEVH01006756    PNF36455.1    PNF36450.1    PNF36449.1    PNF36454.1    KQ971351    EFA06518.2    DS235014    EEB10467.1    KK853153    KDR10554.1    GBHO01032168    JAG11436.1    GEZM01012051    JAV93241.1    APGK01054093    APGK01054094    APGK01054095    APGK01054096    KB741247    ENN72009.1    GGMR01018824    MBY31443.1    GGMS01013288    MBY82491.1    ABLF02036508    PNF36461.1    GFXV01002923    MBW14728.1    PNF36460.1    GL446268    EFN88191.1    KQ434844    KZC08155.1    GFTR01008478    JAW07948.1    GL888243    EGI64080.1    KQ979608    KYN20483.1    UFQS01000031    UFQT01000031    SSW97852.1    SSX18238.1    KQ982944    KYQ49021.1    KQ981965    KYN31826.1    SSW97849.1    SSX18235.1    SSW97851.1    SSX18237.1    SSW97850.1    SSX18236.1    SSW97847.1    SSX18233.1    SSW97848.1    SSX18234.1    KK107139    EZA57722.1    KQ978081    KYM97134.1    KQ414628    KOC67372.1    KQ976691    KYM77904.1    GDUN01000722    JAN95197.1    CH478040    EAT34249.1    GBYB01002152    JAG71919.1    KQ764513    OAD54508.1    DS232132    EDS35777.1    GBYB01008052    JAG77819.1    GFDL01014953    JAV20092.1    GGFJ01000906    MBW50047.1    GFDL01014936    JAV20109.1    NNAY01001776    OXU22951.1    ADTU01023750    ADTU01023751    ADTU01023752    ADTU01023753    GFDL01014996    JAV20049.1    GGFK01003404    MBW36725.1    GGFJ01000483    MBW49624.1    GGFJ01000465    MBW49606.1    GGFJ01000464    MBW49605.1    ADMH02001258    ETN63366.1    GL768124    EFZ12020.1    QOIP01000003    RLU24937.1    AXCN02000894    AAAB01008807    EAA04687.4    GFDF01006830    JAV07254.1    GL438820    EFN68452.1    ATLV01012362    KE524785    KFB36604.1    AXCM01000589    JR049845    AEY61096.1    LBMM01004653    KMQ92205.1    GBYB01002153    JAG71920.1    GBHO01044415    JAF99188.1    GDHC01002459    JAQ16170.1    GANO01002332    JAB57539.1   
Pfam
PF17838   PH_16        + More
PF00621   RhoGEF
PF09349   OHCU_decarbox
PF00130   C1_1
Interpro
IPR035899   DBL_dom_sf        + More
IPR041020   PH_16       
IPR000219   DH-domain       
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       
IPR002219   PE/DAG-bd       
IPR018020   OHCU_decarboxylase       
IPR036778   OHCU_decarboxylase_sf       
SUPFAM
SSF48065   SSF48065        + More
SSF158694   SSF158694       
Gene 3D
PDB
4D0N     E-value=4.66017e-48,     Score=485

Ontologies

Topology

Length:
741
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03009
Exp number, first 60 AAs:
0.00014
Total prob of N-in:
0.00019
outside
1  -  741
 
 

Population Genetic Test Statistics

Pi
268.8299
Theta
179.063175
Tajima's D
1.492186
CLR
0.177008
CSRT
0.789310534473276
Interpretation
Uncertain
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