SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16304
Pre Gene Modal
BGIBMGA013770
Annotation
PREDICTED:_uncharacterized_protein_LOC101744353_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.908
 

Sequence

CDS
ATGTCGACGAGTAACGATATGAGTGATGTTGACTCACCGAAGCTAAGAATGAAGCCTGCAGTCAGCAGGATATTCTGCTGCAGTGTCACAGCTGCGTCAGGTTTTGTCGCGGCCTATGCGCTGGTGGCGTACGCGATCGCGTTGATCTACGAAATAGTGTGGGTCGTTGAATCACAGAGCGGACTACCTATTCCATCGGTACTGCTCATGGTATGCTACATCATCGTCATAGCCGCCACCGTAACATTAGTTCATGGGCTTATATCGAAAAACAACAAATATCTTCTAGCATGGTTGATAGCGGTCATCTTAGTGCTGATACCGGAGTGTGCTCTAGTCTTCTATATGTCTATTAGTCATTGGGGTCTGCAAGGAGTTTATGGGGGCGCGGAGTTGGCATGCTACGTGGCACGGCTACCGGCAATCGTCTGCGGAGTTGTGCTGGTACAGTCGGCCTATGCGCTGAGAGAAGCCAGGAAAGCGGGCTACGGGAACGGTGCGGCAGTTAGCGGGAGTGAGTTCGACGCCAGCCACTACATCCCCGATGCTCCATCCGCCTTTACAAACGATGGATTTTTATCAGACAACGGTAAATCAGGGTCGATGCCAGATCTGAGACGGCACCTCGCGAGCCGTCAGTCCGCACGTAGCGCGTACGGCCCCCCTCCTCCCGCGTACGGCCCCCCGCCTCCCGCCTACTGGCGCCATCTCGCGGGCGCCGCCAGTCTGCGCGGGTACCCCAAGCCGTACGTCCCACAGCACGGCACCTGGGTCGGGCCCCGGACCAGCCCCTACGACAACCCCTACAAACGCCGCCATTCCATCGTCGGCGCGTTTACCACAGACGAATACCCCTCAAAGAATTACGAATACGAGGACAGAGCGGACTGTAAAAGCGAAATGGCGTATCCTTATTATCGACCTTACGCCTACGACCCAAGGTTGTATCCGGAATACGGATTTTACCCAGATTACAAGAGAGAAGAGGCTTCGTACGGTGTTAATTTGCTTCGGCATGACCCTTATCACTTCAGTGGCTCTAGGGAGAGAGTCTTCTACAACATGAGGAACAGTCACACGTCAGTTGGCAATGAATCTGATGATTTGACCAAATATAAAGATGTTGCCTTGTAG
Protein
MSTSNDMSDVDSPKLRMKPAVSRIFCCSVTAASGFVAAYALVAYAIALIYEIVWVVESQSGLPIPSVLLMVCYIIVIAATVTLVHGLISKNNKYLLAWLIAVILVLIPECALVFYMSISHWGLQGVYGGAELACYVARLPAIVCGVVLVQSAYALREARKAGYGNGAAVSGSEFDASHYIPDAPSAFTNDGFLSDNGKSGSMPDLRRHLASRQSARSAYGPPPPAYGPPPPAYWRHLAGAASLRGYPKPYVPQHGTWVGPRTSPYDNPYKRRHSIVGAFTTDEYPSKNYEYEDRADCKSEMAYPYYRPYAYDPRLYPEYGFYPDYKREEASYGVNLLRHDPYHFSGSRERVFYNMRNSHTSVGNESDDLTKYKDVAL

Summary

Ontologies

Topology

Length:
377
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
90.5877099999999
Exp number, first 60 AAs:
25.39949
Total prob of N-in:
0.99526
POSSIBLE N-term signal
sequence
inside
1  -  23
TMhelix
24  -  46
outside
47  -  65
TMhelix
66  -  88
inside
89  -  94
TMhelix
95  -  117
outside
118  -  126
TMhelix
127  -  149
inside
150  -  377
 
 

Population Genetic Test Statistics

Pi
216.365562
Theta
162.902048
Tajima's D
1.140537
CLR
0.356278
CSRT
0.704214789260537
Interpretation
Uncertain
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