Gene

KWMTBOMO16297

Pre Gene Modal

BGIBMGA002240

Annotation

PREDICTED:_uncharacterized_protein_LOC106717303_[Papilio_machaon]

Location

Bomo_Chr28(+):4836331-4839795      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.648

CDS

ATGAAGCCTCTGTCAAAACTTGAAATGCAGTGTGAAGAGCATTTTAAGAAAACTCACACTCGAAACACTGACGGTCGATATGAGGTTCGCCTACCCTTCAAGGACGAAGACGCTCCAAATTTAGGCAACTCCAGACAACTTGCTTTGAAACGCTTACATCAGATGGAGAATAAGTTTAAGCGAAGACCCGAGTTTCACGAAGAATACAGCAAGTTCATGAGACAATATGAGTCACTCGGTCACATGGAGGTCGTCCCTGAAACAGAGAAGACGAATAGAGCTTATCACCTACCACATCATGCTGTTCTTCGTGCCTCGAGCCTCACTACAAAGTTGCGCGTAGTATTTGACGGAAGCGCTAAGCCTGTAGACGGAAACTCACTTAACGATGAGTTACTCATCGGCCCACCGCTGCAACAAGATATACGAGATTTAGTAACACGGTGGAGACAACATAAGTACTGCCTAGTAGCTGATATACAACACATGTACCGACAGATACTTATTTCAAAGCAAGACACTGATTACCAGAGAATCTTGTGGCGCGAGTCATCGGAAGACCCGATTAGAGAATATCGGTTACTTACCGTCACATATGGCAGTTCATGTGCTCCATATCTTGCTATAAGGACACTTCATCAACTTGCAGAGGACGAACGTGGAAAGTTTCCTGAAGCTGAACTTCTAAAAACTGATCTCTATATGGACGATTTGATGACAGGCTCATCTACAGAAGAAGACACTCAACGGCTTCAACGTCGCTTAACTGAACTGTTTAAACGTGGCGGTTTTCTTCTACACAAGTGGTCGTCTAATAGTGAAATAGTTTTAAATGAGATTCCCGATTCGATAAAAGCATTAAAAGGTTCAGTGAATATTAAAATGGATGATTCGGTGAAAGCTCTGGGTATAGCCTGGAAACCTCAAAGTGATATATTTGAACTGGTAGTTAACTTACCTCATGACAACGACGTTGTTACAAAACGAAGTGTGCTATCTGCGATAGCAAAAACTTTTGACCCTCTGGGTTGGCTAGCACCTTGCGTGATTGTGTTAAAAATGTTTATGCAGAAGTTGTGGCTGGCCGGCCTGGACTGGGACTCTGAACTTCCTGAAGACTTGAAAACTGAATGGCAGAATTACCTGACTAATTTTGAACACATGCAGGCCATTCAGCTTCCACGTTGGCTAGGGATTTCAAATAATGTCAAAATTGAATTGCACGGCTATTGTGACGCCTCTTGCGCCGCCTACGCTGCGGTTATTTACATCAGAGTAATCACGGACAATGAGATAAAAGTAAGTCTAGTCGCAGCCAAAACAAAGGTCGCTCCCGTTAAACAGATCTCATTGCCACGTCTTGAACTTTGTGGGGCAGTCTTATTGTCTAAATTGATACCATATGTCAAATCTAGTCTAAATATTGATGATAATTGTGTATTTGCTTGGACAGATTCCACAATAGTTTTGGCTTGGTTGCGTAAAACTCCAAATACTTGGAAGCCATTCGTTGGTAATCGCACTACCGAAATCTTGAATGTTACGAATAGCAGTCAATGGCATCATATTAAGTCTGCGGATAACCCCGCGGACTGCGCTTCACGCGGTATCAGTCCTGGCGAGCTGATGCAGTCACAACTATGGTGGGAAGGTCCAGCCTTTCTTCGCGAGTCTGTTGAGATTCGTTACCCTGATTTCACTATACCTGAAACCACACTCGAAGCAAAACCGAAAGCAAAAGTTAGTTACTTATGCACCTCTGAACCCAATGAATGTACTATGTACCTCAATAGATACTCAAATCTACTTAGACTTATACGTGTGACAGCCTATTGCTTTCGATTTTTGCGACTATGTAAAGATAAGGCTCTTAAAAGGAACGATAACATAAAACTGACATACCTCACTACTGATGAAATAAAAAATGCATTAAAAACTTGCATACGAATGTCACAGTCTGTTTACTTTAAAAGTGAAATAGGATTGTTATCACAGAGCAAACCTATCCCAAAAAATAGTAAACTTTTACCTTTGAATCCGATCCTAGACAATGAGAAAATTATTAGAGTCGGTGGACGTCTTGTAAATGCTCAAATACCACCTGATATGAAGTCTCCTATAATCTTACATCACAAATGTAACTTAGCAAAGTTGATTGTAATTGATGCTCATTTGAGAACACTACATGGTAGAAATTCGCTCACATTAAATGTTGTCCACCAAAAATATTGGATTCTCCGAGCAAAGAACTTAGTAAAAAAGATTTTAAGATTATGTAAACCTTGTTTTACCCAAACTGCACGACCTATGACTCCGTTAATGGGTAATTTACCACAGTGCAGAGTCAATCCGTCACGCCCGTTTTTGACCAGCGGCGTAGACTTTTGTGGTCCATTTACGCTGAAACTGTACTCTGGTAGATGCACCAAAACTTGTAAAGCTTACATAGGTGTGTTTTTATGTATGGTTACAAAGGCTATTCACCTTGAGCTGGTTAGTTCACTATCCAGTGCTGCGTTTTTAGCAGCCTTCAAACGTTTTACTTCCCGACGTGGGCATTGTAAAGACATCTGGAGTGATTGTGGGACTAACTTCATAGGCGCGTCCAAAGAATTGGATCTCGCCTTCAAAAACAGTAAATCCACTGTCGTTGACGAAATCGCCCAACTGTTAGCTAACGACAGCACAACATGGCATTTCATTCCCCCTGGTGCCCCTCACTTTGGAGGATTGTGGGAGGCAGGAGTTAAGTCCGTAAAAGGACATTTGAAACGTGTCGTAGGCGAGTCCTGCTTAACATTCGAAGAGTTTTGCACTCTGACCACACAGGTCGAGGCTTGTGTCAACTCTCGGCCTCTTACGTTGATTAGTTCTGCCGTTGATGAACTCCCGTTGACTCCTGGTCATTTTTTGATCGGCGAAGCACCGGTTACTATCCCTGAAGAAAGTTTCGTGGATACTCGACCTGACTATTTAAACCGATGGCAAAAGGTGCAACGTATGGTACAAAGTCTGTGGCGACGCTGGCAATCTGAGTATCTTACTATGTTGCAACATCGATACAAATGGTCCCAGAACCACCCCGACATAAATGTTGGTACGGTTGTCTTAGTGAAAGATGATCGTTTACCTCCAGGTAAATGGCTTTTGGGACGAATCGTGGCGAAGCACCCGGGAGCAGACGGTGTAACGCGTGTAGTCTCCTTACAATTTAAGGATCGTGTATTTAAGAGACCAGTTACTAAACTGTGCCCTCTGCCTCTAGCTGCTTCAGAACCTTAG

Protein

MKPLSKLEMQCEEHFKKTHTRNTDGRYEVRLPFKDEDAPNLGNSRQLALKRLHQMENKFKRRPEFHEEYSKFMRQYESLGHMEVVPETEKTNRAYHLPHHAVLRASSLTTKLRVVFDGSAKPVDGNSLNDELLIGPPLQQDIRDLVTRWRQHKYCLVADIQHMYRQILISKQDTDYQRILWRESSEDPIREYRLLTVTYGSSCAPYLAIRTLHQLAEDERGKFPEAELLKTDLYMDDLMTGSSTEEDTQRLQRRLTELFKRGGFLLHKWSSNSEIVLNEIPDSIKALKGSVNIKMDDSVKALGIAWKPQSDIFELVVNLPHDNDVVTKRSVLSAIAKTFDPLGWLAPCVIVLKMFMQKLWLAGLDWDSELPEDLKTEWQNYLTNFEHMQAIQLPRWLGISNNVKIELHGYCDASCAAYAAVIYIRVITDNEIKVSLVAAKTKVAPVKQISLPRLELCGAVLLSKLIPYVKSSLNIDDNCVFAWTDSTIVLAWLRKTPNTWKPFVGNRTTEILNVTNSSQWHHIKSADNPADCASRGISPGELMQSQLWWEGPAFLRESVEIRYPDFTIPETTLEAKPKAKVSYLCTSEPNECTMYLNRYSNLLRLIRVTAYCFRFLRLCKDKALKRNDNIKLTYLTTDEIKNALKTCIRMSQSVYFKSEIGLLSQSKPIPKNSKLLPLNPILDNEKIIRVGGRLVNAQIPPDMKSPIILHHKCNLAKLIVIDAHLRTLHGRNSLTLNVVHQKYWILRAKNLVKKILRLCKPCFTQTARPMTPLMGNLPQCRVNPSRPFLTSGVDFCGPFTLKLYSGRCTKTCKAYIGVFLCMVTKAIHLELVSSLSSAAFLAAFKRFTSRRGHCKDIWSDCGTNFIGASKELDLAFKNSKSTVVDEIAQLLANDSTTWHFIPPGAPHFGGLWEAGVKSVKGHLKRVVGESCLTFEEFCTLTTQVEACVNSRPLTLISSAVDELPLTPGHFLIGEAPVTIPEESFVDTRPDYLNRWQKVQRMVQSLWRRWQSEYLTMLQHRYKWSQNHPDINVGTVVLVKDDRLPPGKWLLGRIVAKHPGADGVTRVVSLQFKDRVFKRPVTKLCPLPLAASEP

Uniprot

A0A2H1WH28   A0A0N0PAG9   A0A0N1IHU1   A0A0J7KGI8   A0A226EPI5   A0A0J7KCR4   + More
A0A1Y1LBZ3   A0A226E226   A0A226EUF5   A0A226DMG9   A0A0J7N5C9   A0A0J7N536   A0A0J7KB34   A0A226CWA5   A0A0J7K7L1   A0A0J7KCI2   A0A0J7N890   A0A0J7KFC5   A0A087T9T6   A0A226D417   A0A0J7ND98   A0A0J7KBZ0   A0A0J7N465   A0A2A4K6T9   A0A0J7KCB9   A0A0J7KBS8   A0A226E0X4   A0A0J7KJY9   A0A226EM86   A0A226EUK6   A0A226D0T3   W8CCT3   Q8I7Q1   A0A0J7KNK6   A0A069DYA1   J9LHB7   A0A2S2NCU7   A0A224XG39   X1WN86   A0A1Y1MTT1   A0A023F0J1   A0A0J7KBV8   A0A182H647   A0A182HA33   A0A1Y1N4E1   J9JNP4   X1WNM7   A0A0J7K9X4   A0A226EBC2   A0A023EZK8   A0A2S2PTX9   J9KCB6   A0A226DKA3   A0A1S3DIE2   A0A3Q0JDB5   A0A034W2D1   A0A226DUQ5   E9J9Y8   A0A0J7K9A7   A0A2S2QPS5   A0A0J7KCX3   J9KLD6   A0A3Q0JI79   J9JUK4   A0A2S2P1P0   A0A1S3DHZ9   A0A2S2Q6Z5   A0A1Y1L369   A7XDH0   A0A3L8DXG3   J9KD60   A0A2S2PNZ4   V9GZW9   X1WK09   A0A2S2NLW5   A0A1U8N896   Q4EBB8   A0A2M4CSC7   A0A2S2P963   A0A1W7R6F4   A0A2S2QLL5   Q8MNR4   X1WV59   J9JT64   J9K351   A0A0A9YD88   J9L9H5   A0A1X7UAA5   J9JUM9   W4VR47   Q4JS97   A0A2S2PNC2   A0A1Y1MY22   A0A1W7R6J2   A0A1W7R6L7   V5GHM7   A0A2S2PBK9   A0A1B6MUZ9   A0A0A9VSF7   A0A1Y1MYB7  

Pubmed

26354079    28004739    24495485    26334808    25474469    26483478    + More
25348373    21282665    17761848    30249741    25893780    15774024    14634869    25401762    15944077   

EMBL

ODYU01008608    SOQ52337.1    KQ458473    KPJ05885.1    KQ460036    KPJ18393.1    + More
LBMM01007859    KMQ89359.1    LNIX01000002    OXA59522.1    LBMM01009551    KMQ88039.1    GEZM01060254    JAV71154.1    LNIX01000007    OXA51795.1    OXA60848.1    LNIX01000016    OXA46198.1    LBMM01009746    KMQ87900.1    LBMM01009898    KMQ87805.1    LBMM01010405    KMQ87487.1    LNIX01000069    OXA36894.1    LBMM01012188    KMQ86362.1    LBMM01009688    KMQ87939.1    LBMM01008464    KMQ88855.1    LBMM01008324    KMQ88972.1    KK114194    KFM61875.1    LNIX01000036    OXA39969.1    LBMM01006539    KMQ90520.1    LBMM01009964    KMQ87756.1    LBMM01010417    KMQ87475.1    NWSH01000070    PCG79985.1    LBMM01009645    KMQ87967.1    LBMM01009888    KMQ87813.1    OXA51382.1    LBMM01006490    KMQ90572.1    LNIX01000003    OXA58579.1    LNIX01000001    OXA61293.1    LNIX01000044    OXA38660.1    GAMC01003146    JAC03410.1    AY180917    AAN87269.1    LBMM01005079    KMQ91831.1    GBGD01000063    JAC88826.1    ABLF02022040    ABLF02056888    GGMR01002340    MBY14959.1    GFTR01008874    JAW07552.1    ABLF02041590    GEZM01021505    JAV88969.1    GBBI01004211    JAC14501.1    LBMM01009941    KMQ87772.1    JXUM01113346    KQ565681    KXJ70776.1    JXUM01030959    KQ560903    KXJ80414.1    GEZM01013098    JAV92753.1    ABLF02005684    ABLF02042806    LBMM01010986    KMQ87097.1    LNIX01000005    OXA54454.1    GBBI01004032    JAC14680.1    GGMR01020322    MBY32941.1    ABLF02042264    LNIX01000018    OXA45284.1    GAKP01010103    JAC48849.1    LNIX01000011    OXA48427.1    GL769615    EFZ10365.1    LBMM01011283    KMQ86917.1    GGMS01010524    MBY79727.1    LBMM01009210    KMQ88303.1    ABLF02013940    ABLF02036313    ABLF02066938    ABLF02066950    ABLF02039606    GGMR01010750    MBY23369.1    GGMS01004301    MBY73504.1    GEZM01066272    JAV68024.1    EF426679    ABP48078.1    QOIP01000003    RLU24775.1    ABLF02041863    GGMR01018506    MBY31125.1    U23420    AAB03640.1    ABLF02065856    GGMR01005535    MBY18154.1    AAGB01000056    EAL58741.1    GGFL01004049    MBW68227.1    GGMR01013370    MBY25989.1    GEHC01000898    JAV46747.1    GGMS01009443    MBY78646.1    AJ487856    CAD32253.1    ABLF02041731    ABLF02023842    ABLF02028949    ABLF02058391    ABLF02025193    GBHO01020765    GBHO01014531    JAG22839.1    JAG29073.1    ABLF02008636    ABLF02065931    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GANO01004788    JAB55083.1    CR954257    CAJ14165.1    GGMR01018294    MBY30913.1    GEZM01018702    JAV90048.1    GEHC01000894    JAV46751.1    GEHC01000864    JAV46781.1    GALX01004947    JAB63519.1    GGMR01014165    MBY26784.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    GBHO01044317    GBHO01044315    JAF99286.1    JAF99288.1    GEZM01018619    JAV90138.1   

Proteomes

UP000053268    UP000053240    UP000036403    UP000198287    UP000054359    UP000218220    + More
UP000007819    UP000069940    UP000249989    UP000079169    UP000279307    UP000189702    UP000007879   

PRIDE

Q8I7Q1    Q8MNR4   

Pfam

PF17921   Integrase_H2C2        + More
PF05585   DUF1758
PF03564   DUF1759
PF05380   Peptidase_A17
PF18701   DUF5641
PF00665   rve
PF00078   RVT_1
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH
PF00230   MIP
PF12259   Baculo_F
PF02145   Rap_GAP

Interpro

IPR001584   Integrase_cat-core        + More
IPR012337   RNaseH-like_sf       
IPR008042   Retrotrans_Pao       
IPR001878   Znf_CCHC       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR005312   DUF1759       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR000477   RT_dom       
IPR001995   Peptidase_A2_cat       
IPR000727   T_SNARE_dom       
IPR041373   RT_RNaseH       
IPR001969   Aspartic_peptidase_AS       
IPR041577   RT_RNaseH_2       
IPR000425   MIP       
IPR023271   Aquaporin-like       
IPR022048   Envelope_fusion-like       
IPR000331   Rap_GAP_dom       
IPR035974   Rap/Ran-GAP_sf       
IPR013087   Znf_C2H2_type       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF81338   SSF81338       
SSF111347   SSF111347       

Gene 3D

3.30.420.10     2.40.70.10     1.20.1080.10     3.40.50.11210    

ProteinModelPortal

A0A2H1WH28   A0A0N0PAG9   A0A0N1IHU1   A0A0J7KGI8   A0A226EPI5   A0A0J7KCR4   + More
A0A1Y1LBZ3   A0A226E226   A0A226EUF5   A0A226DMG9   A0A0J7N5C9   A0A0J7N536   A0A0J7KB34   A0A226CWA5   A0A0J7K7L1   A0A0J7KCI2   A0A0J7N890   A0A0J7KFC5   A0A087T9T6   A0A226D417   A0A0J7ND98   A0A0J7KBZ0   A0A0J7N465   A0A2A4K6T9   A0A0J7KCB9   A0A0J7KBS8   A0A226E0X4   A0A0J7KJY9   A0A226EM86   A0A226EUK6   A0A226D0T3   W8CCT3   Q8I7Q1   A0A0J7KNK6   A0A069DYA1   J9LHB7   A0A2S2NCU7   A0A224XG39   X1WN86   A0A1Y1MTT1   A0A023F0J1   A0A0J7KBV8   A0A182H647   A0A182HA33   A0A1Y1N4E1   J9JNP4   X1WNM7   A0A0J7K9X4   A0A226EBC2   A0A023EZK8   A0A2S2PTX9   J9KCB6   A0A226DKA3   A0A1S3DIE2   A0A3Q0JDB5   A0A034W2D1   A0A226DUQ5   E9J9Y8   A0A0J7K9A7   A0A2S2QPS5   A0A0J7KCX3   J9KLD6   A0A3Q0JI79   J9JUK4   A0A2S2P1P0   A0A1S3DHZ9   A0A2S2Q6Z5   A0A1Y1L369   A7XDH0   A0A3L8DXG3   J9KD60   A0A2S2PNZ4   V9GZW9   X1WK09   A0A2S2NLW5   A0A1U8N896   Q4EBB8   A0A2M4CSC7   A0A2S2P963   A0A1W7R6F4   A0A2S2QLL5   Q8MNR4   X1WV59   J9JT64   J9K351   A0A0A9YD88   J9L9H5   A0A1X7UAA5   J9JUM9   W4VR47   Q4JS97   A0A2S2PNC2   A0A1Y1MY22   A0A1W7R6J2   A0A1W7R6L7   V5GHM7   A0A2S2PBK9   A0A1B6MUZ9   A0A0A9VSF7   A0A1Y1MYB7  

KEGG

105841895    no KO assigned | (RefSeq) uncharacterized LOC105841895

GO

GO:0008270   GO:0003676   GO:0015074   GO:0004190   GO:0015267   GO:0016021   GO:0051056   GO:0005096   GO:0003964   GO:0005694   GO:0051276   GO:0005515   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

1093

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12191

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00034

outside

1  -  1093

 

 

Pi

376.218194

Theta

192.866422

Tajima's D

3.086891

CLR

0.381607

CSRT

0.983100844957752

Interpretation

Uncertain