SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16286
Pre Gene Modal
BGIBMGA013891
Annotation
PREDICTED:_pre-mRNA-splicing_factor_38A_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.493
 

Sequence

CDS
ATGGCGAATCGTACCGTAAAGGACGCGAAATCAATTCGGGGTACAAATCCTCAGTATTTAATAGAAAAAATTATCAGATCTCGTATTTACGACTCGAAGTATTGGAAGGAAGAATGTTTCGCTTTAACTGCAGAGCTGGTAGTAGACAAAGCGATGGAATTGCGTTATGTAGGCGGCGTGCACGGCGGTTTCATTTACCCCACACCATTTTTGTGTTTAGTATTAAAAATGCTTCAAATACAGCCAGAAAAAGATATTGTGGTTGAGTTCATAAAGAATGAAGAGTTCAAATACGTACGTGCACTTGGCGCTTTTTACATGCGCCTCACCGGTACCTCTGTTGACTGCTACAAGTATTTGGAGCCACTTTACAACGATAATAGGAAGTTAAGGCGGCAAAATCGCGACGGCCAATACGAGATAGTTCACATGGACGAGTTTATTGATGAATTACTGCGCGAAGAGAGATTATGCGATATTATTATGCCGAGGATACAGAAACGTCATATTTTGGAGCAGAATAACGAAATCGAGCCCAAAATTTCGGCTCTGGATGATGATATGGATGAAGAAATGCCGTCTGACGATGAAGTTATTGACCCCGAAGCCAAAGAGAACAAGCGAGAGAAAGATAGACGGGACAGGGATAGAAAGAGAGATAGATCAAGAGACCGTGACAGACGTGATAAGGACAGAAAAAGAGAACGTTCAAGGAGCAGAGATAGAAGACGTGATAGGGAGAGAGAAAAAGAGCGGGAACGCGAGAAGGAACGAGAAAGAGAGAAGGAACGTGAAAGGGAAAAGGAACGTGAAAGAGAGAAAGAACGCGAAAGAGACAAAGAGCGTGAAAGAGAAAAGGAACGTGAACGAGAGAAGGATAGAGACCGTGAACGTCAAAGAGATAGAGATAAGGACCGAAGAGAAAGACATGATGATAGGAGAAGAGATAGAAGACATTAG
Protein
MANRTVKDAKSIRGTNPQYLIEKIIRSRIYDSKYWKEECFALTAELVVDKAMELRYVGGVHGGFIYPTPFLCLVLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYMRLTGTSVDCYKYLEPLYNDNRKLRRQNRDGQYEIVHMDEFIDELLREERLCDIIMPRIQKRHILEQNNEIEPKISALDDDMDEEMPSDDEVIDPEAKENKREKDRRDRDRKRDRSRDRDRRDKDRKRERSRSRDRRRDREREKEREREKEREREKEREREKEREREKERERDKEREREKEREREKDRDRERQRDRDKDRRERHDDRRRDRRH

Summary

Uniprot
ProteinModelPortal
PDB
4RZA     E-value=2.11994e-81,     Score=769

Ontologies

GO

Topology

Length:
319
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
6.79203
Exp number, first 60 AAs:
1.32981
Total prob of N-in:
0.55463
outside
1  -  319
 
 

Population Genetic Test Statistics

Pi
347.395208
Theta
217.591761
Tajima's D
1.776186
CLR
0
CSRT
0.844157792110394
Interpretation
Uncertain
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