SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16285  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014007
Annotation
hypothetical_protein_KGM_12813_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.242
 

Sequence

CDS
ATGGCATCTACATCCAATGATAACGTGCCTCAACATATGAATGCTCCAGAAAATGCTTCTGATGAACTTGAACCGGGTGCATGTCATGATAGCATACTAAACCCCACTGATTCCTTTGAAGAGTTTGCATCGGAGATGAGTTCCAGCCTAAGAGAGACCTGCTTGACTACTAAGAGCAGTACTATAAGTGAAATACAAAGTGAAATCTTGGAAACTGCTGAAGACCCTAAACTGAAAGCAGCGAAATCAAGTGATGATTTACAAACAAAAGATGGATCAATGTCAGCTTCAGCCAGCAATTCGAACTTAATTGAGGAGAATGGAGATGATACAGATGATGATAAAGACTATCTACAGTCACCAGAACTTGTTAATAAAGAGAAACATGTGTTCATACTTAGCACTGCAGGAAAACCTATTTATTCAAGATATGGCAACGAAGACAAGTTAGCTGGCCTGTGTGGTGTTATCCAAGCTCTTGTCAGCGTAATAGAAGAACAGAACCAGGATATATTGAGGTTCATCAACACGAAAGATTGTAAAGCAGTATTCCTTGTTAAGGGACCCCTAATACTGGTTGCTGTTTCGAAATCCAATGAAAGTGAAACCCAATTAGTTTTGCAGTTGACATATGCATTCAATCAAATTGTTTCGCTGTTAACACTAACCCAACTGAATAGAATATTTGAGCAGCGAAGGAACTATGATCTGAGAAGGCTACTGGCCGGAGCTGAAAGATTGATTGATCATTTGCTTGTGTTTATGGAGAAAGATCCTGCCTTTTTACTAGGTGCAGTCCGATGCCTTCCTTTACCAGAAAAAGCCAGAGAGAATATCACGAATGCAATAACAACCACGTGCCACAAGATTCGTGATCTCGTCTTCGCTATAATGATAGCTGGGAATCAACTGATAACATTAGTGAGAATGAAAAAATACACCCTGCACCCTTCGGATATACATTTGCTTTTCAATTTAATAAGGAGTTCGGAGTCATTCAAAACGGCCGAGAGCTGGACGCCAATATGCCTTCCCAAGTTTGATGCAACGGGCTTCCTGCACGGCCACGTGTCTTACATATCAGAGGACTGCCAGGCCTGTCTACTTCTACTGACCGTACAAAGGGATGCATTTACAACTTTATCCCAAGCCAAACACACAATAGCCGAGAAAATGAGACGGGCAAACTGTTTAGTTGCCATTAACAATGCTTTAAACCGTAACGAAGAGTTGTCCACAACGAAACCCCTCAAGCACATCGGCATACCGGAAATAAGGCATTTTATGTATAAATGTAAATCAACAGCGCAGCTGTTCTCGTCGGATCCGATTAGTTTAGATCGATTACAAGATTATCGATTAAGGCACAAAGAAGGGGGCGATATAGTCGATAAGAAAATAACAAAGTTGTCGGATATCGATTATGTTAGAAACTATCGGAAGTTTTGTAATCAGATACATTGTGTCGCGACGCCTGCTAAGCTTATATTCAGATCGAGTTCACAAGACACAATATTGTCTTGGGTGACAAACGGTTTCGAATTGTACGTGACGTTCGATCCGCTTATGGAGAAGGATCACGCGATCAAGGCCGTCGACCGACTCCTCAGGTGGATAAAGAAAGAAGAGGAGAGGATATTCATAATGAACGCTCCGACCTTCTAG
Protein
MASTSNDNVPQHMNAPENASDELEPGACHDSILNPTDSFEEFASEMSSSLRETCLTTKSSTISEIQSEILETAEDPKLKAAKSSDDLQTKDGSMSASASNSNLIEENGDDTDDDKDYLQSPELVNKEKHVFILSTAGKPIYSRYGNEDKLAGLCGVIQALVSVIEEQNQDILRFINTKDCKAVFLVKGPLILVAVSKSNESETQLVLQLTYAFNQIVSLLTLTQLNRIFEQRRNYDLRRLLAGAERLIDHLLVFMEKDPAFLLGAVRCLPLPEKARENITNAITTTCHKIRDLVFAIMIAGNQLITLVRMKKYTLHPSDIHLLFNLIRSSESFKTAESWTPICLPKFDATGFLHGHVSYISEDCQACLLLLTVQRDAFTTLSQAKHTIAEKMRRANCLVAINNALNRNEELSTTKPLKHIGIPEIRHFMYKCKSTAQLFSSDPISLDRLQDYRLRHKEGGDIVDKKITKLSDIDYVRNYRKFCNQIHCVATPAKLIFRSSSQDTILSWVTNGFELYVTFDPLMEKDHAIKAVDRLLRWIKKEEERIFIMNAPTF

Summary

EMBL
BABH01018704    BABH01018705    BABH01018706    BABH01018707    KZ150026    PZC74801.1    + More
NWSH01000053    PCG80171.1    RSAL01000126    RVE46559.1    AGBW02012657    OWR44645.1    ODYU01000435    SOQ35196.1    KQ459588    KPI97750.1    GDQN01000782    JAT90272.1    KQ460417    KPJ14878.1    GDQN01009928    JAT81126.1    NEVH01016358    PNF25223.1    KK852471    KDR23174.1    KQ971352    EFA06262.1    KQ981673    KYN38340.1    ADTU01011283    KQ976500    KYM83208.1    KQ980581    KYN15291.1    GL888932    EGI57213.1    KQ982373    KYQ56986.1    KZ288194    PBC33904.1    NNAY01005719    OXU16578.1    KK107276    EZA53641.1    KQ977242    KYN04681.1    GL447257    EFN86635.1    AAZX01006018    GL762841    EFZ20660.1    GL435766    EFN72720.1    KQ434905    KZC11214.1    KQ414667    KOC64701.1    QOIP01000004    RLU23828.1    PNF25225.1    GEZM01044489    JAV78182.1    GEBQ01025836    JAT14141.1    APCN01001698    ADMH02000283    ETN67125.1    ATLV01021498    KE525319    KFB46609.1    AXCM01000917    AXCN02000656    AAAB01008980    EAA14084.4    GECU01000140    JAT07567.1    AMQN01011686    KB309028    ELT95737.1    GFDF01010544    JAV03540.1    AJVK01059336    AJWK01012538    CH477557    EAT39024.1    AJVK01035595    JH431575    GFDL01013127    JAV21918.1    DS231866    EDS40522.1    GFDL01013142    JAV21903.1    JXUM01100699    KQ564590    KXJ72052.1    APGK01051116    KB741181    KB632333    ENN73099.1    ERL92750.1    KQ418469    KOF87238.1    GG666527    EEN58908.1    GDAI01000954    JAI16649.1    PZQS01000009    PVD24522.1    UFQT01000758    SSX27028.1    KK119542    KFM75973.1    GDRN01054937    JAI66038.1    LSMT01000034    PFX31569.1    LBMM01001064    KMQ96993.1    KB201037    ESO99284.1    GDKW01003085    JAI53510.1    GECL01002556    JAP03568.1    HAAD01002820    CDG69052.1    LJIJ01000508    ODM96727.1    NEDP02076733    OWF35302.1    HACG01024019    CEK70884.1    JH818263    EKC28095.1    GFTR01005905    JAW10521.1    DS469611    EDO39191.1    AE014134    BT150242    AAF50969.1    AGV77144.1    CM002910    KMY88140.1    CM000157    EDW87684.1    GBXI01011949    JAD02343.1    GFXV01004948    MBW16753.1    AY119194    AAM51054.1    GANP01010840    JAB73628.1    CH480820    EDW54281.1    CH963920    EDW77611.1    GAKP01003981    JAC54971.1    CH954177    EDV57778.1    HACA01004052    CDW21413.1   
Pfam
PF03164   Mon1
Interpro
IPR004353   Mon1        + More
IPR011012   Longin-like_dom_sf       
SUPFAM
SSF64356   SSF64356       
PDB
5LDD     E-value=1.04553e-18,     Score=231

Ontologies

Topology

Length:
554
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15748
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00677
outside
1  -  554
 
 

Population Genetic Test Statistics

Pi
253.791031
Theta
189.453122
Tajima's D
1.528925
CLR
0.327728
CSRT
0.791460426978651
Interpretation
Uncertain
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