Gene

KWMTBOMO16283

Annotation

PREDICTED:_uncharacterized_protein_LOC106133664_[Amyelois_transitella]

Location

Bomo_Chr28(+):3869882-3871602      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.736

CDS

ATGAAACCGAATCCTTGCTTAGAAAAAAACTGTCCCTACAAGTGTCAAGAAATAACCTCAGAAAAAAGGAGTGCCATATTTAAACATTTTTGGGAATTATCTCCGGAAAGAAAAAAGCTGTGGATAATATCTATGTCCTCTAAGCAATCCATAAAAAGGAAGAGATCCAAAGACTCTAATTACAGGAATAACACATTTTGTTATTTCATAAATGATGGAGAGGGTCGGCGACAAGTTTGTTTAAAGTTACTCATGAATACTCTTGATGTCACTCAAAGATACATTTATTATACATTAACAACACAGGAACTTGGTATGGCGAAAGAAAATGGAAGAGGAAAATGCATTCCCCCCAACAAAACATCTAACGCAATCAAAGAATCAGTAAAATCTTTTATCAAAAGGTTACCTGCAATACCATTGCACTACTGCCGAAAGGATAGCACAAAACTATATCTGCCTGTTGAATTTAAAAATATAAAAAAATTATACCGCTGTTATAAAGAAGACCTCATTAGTAAAGGAGTCGATGTTGTAAGTGAAAAAGTATTCCGTCAAATATTCACTACTGATTTTAACATTGGGTTTCATGTGTCTAAGAAGGATAAATGCATAAAATGCCTACGTTTTGAAGGACAGAAGCCAGAGGATTGTGCCGAATTTCAAGATCATTTAGAGGAAAAGAAGGCATCAAAGAAGCGGTTAGAATGTCATCGACAGTTAGGTAAAGAAAATCCTTCCATTCTGTGCACATCTTTTGACCTCCAGAAAGTTCTCAATACGCCTCATGGCAATAACATGTTACTATTTTATTCTAGAAAGTATGCTGTTTATAATTTATGTTTTTATGAAAGCATCACAAGGAATGGTTTTTGTTTTATCTGGGGAGAATCTGAAGCAAAGAGGGGCGCAAATGAAATTGCTACTATTATACAGAAATACATAGAGAATGTGGATTCTCGAGGTATCATTACATCTTTGATCTTGTATTCAGATTCTTGCCCTGGACAAAACAAAAATAAAATAGTCCTTGCAACAATACATAATGCTTTGTTGCAATCGAACAATTTACAAGCAATTCAAATGAATTACCTTCTCCGTGGCCACACGGAAATGTCGGTAGACAGCATACACTCTACAATCGAACAATCCGTAAGAAATATTACTGTATGGGCCCCTTCGCAATGGGCTACAATAAGCCAGCTAGCAAGAAAAGAACCAGCACCTTATAATGTTGAAAATCTGACACACGAGGATTTCTTAAATTTTGATGATATGTCAGAAAAATATTTTAAGGGTAACCTTGTAGGTAAAATTAGTAAAATCCGTACAGCAACATTTAAAAAATCTCATCCAAATCAAATGAAAGTAAAATTTTCAATGAAAGATAATGCATCCGAAGAGATTATACAAATTATTGCGAAACCTAGAGCTATCAATCGTAGATATAATTCAAGTTTGCCGATTACCAAAGCCAAATACATGGACCTAAAGAAATTGTGTGACACTGGGGTTATACCCAAGATATTTCATAAAGAATACATAAATCTATAA

Protein

MKPNPCLEKNCPYKCQEITSEKRSAIFKHFWELSPERKKLWIISMSSKQSIKRKRSKDSNYRNNTFCYFINDGEGRRQVCLKLLMNTLDVTQRYIYYTLTTQELGMAKENGRGKCIPPNKTSNAIKESVKSFIKRLPAIPLHYCRKDSTKLYLPVEFKNIKKLYRCYKEDLISKGVDVVSEKVFRQIFTTDFNIGFHVSKKDKCIKCLRFEGQKPEDCAEFQDHLEEKKASKKRLECHRQLGKENPSILCTSFDLQKVLNTPHGNNMLLFYSRKYAVYNLCFYESITRNGFCFIWGESEAKRGANEIATIIQKYIENVDSRGIITSLILYSDSCPGQNKNKIVLATIHNALLQSNNLQAIQMNYLLRGHTEMSVDSIHSTIEQSVRNITVWAPSQWATISQLARKEPAPYNVENLTHEDFLNFDDMSEKYFKGNLVGKISKIRTATFKKSHPNQMKVKFSMKDNASEEIIQIIAKPRAINRRYNSSLPITKAKYMDLKKLCDTGVIPKIFHKEYINL

Uniprot

X1X3M6   J9M1L7   X1XHP1   J9M2W1   J9KUE4   J9M8J2   + More
A0A1Y1LHW9   J9M1M1   A0A2S2PTG2   J9L7Q2   J9KZJ3   W4ZD48   W4YFK8   W4XW95   X1XFA1   A0A3S2P4C8   V4ACF2   J9LMT7   J9LAK0   A0A2H1VXX2   A0A3S2N704   W4Z5Y3   J9KUZ8   J9LH36   A0A3S2NVZ8   X1WUB1   W4YLC1   J9L9L9   H9JW23   A0A0A9VZA8   A0A2H1VV53   J9M9Z7   A0A2H1WUL7   J9KBE8   A0A3S2TF04   J9M4G9   J9LBW7   A0A3S2LBW7   A0A2S2NW59   J9KD89   A0A2S2NVW0   A0A2H1X0U8   J9KRP2   A0A3N0YTD4   J9LP43   V4A9X1   J9LN28   J9KUZ7   X1XRK2   T1HR50   A0A1Y1MM80   A0A2A4J5P3   A0A2S2PPZ7   A0A3S2M8H5   X1XMW5   A0A2H1WLH6   A0A026WEZ7   A0A2G8LDL7   A0A226E9R7   R7USQ6   W4XFL6   T1HH44   A0A034WBB7   A0A336L7N8   A0A1Y1MRG1   A0A1B6ERU6   J9KF07   A0A2H1VFC9   A0A026WRV4   A0A2W1C4W6   A0A3S1ATS4   H9JF09   A0A3S2NCT4   A0A226DDU0   A0A0A1XB56   X1X811   A0A2S2NJY1   A0A1Y1N893   A0A226D9Z5   A0A2S2NGJ4   A0A1B6JR07   W4XFL7   A0A226DKY7   A0A1B6KHL6   J9M2M3  

Pubmed

28004739    23254933    19121390    25401762    24508170    29023486    + More
25348373    28756777    25830018   

EMBL

ABLF02010023    ABLF02004257    ABLF02029811    ABLF02018334    ABLF02012672    ABLF02014818    + More
ABLF02014820    ABLF02012895    GEZM01058056    GEZM01058054    GEZM01058052    GEZM01058051    GEZM01058048    JAV71930.1    GGMR01020048    MBY32667.1    ABLF02007876    ABLF02009246    ABLF02009249    ABLF02012670    ABLF02012673    ABLF02042537    ABLF02044751    AAGJ04019135    AAGJ04019136    AAGJ04019137    AAGJ04087115    AAGJ04159061    ABLF02008707    ABLF02008709    RSAL01000569    RVE41377.1    KB200426    ESP01684.1    ABLF02010195    ABLF02010196    ABLF02055224    ABLF02026661    ABLF02026674    ABLF02026675    ABLF02041813    ABLF02060074    ODYU01004805    SOQ45064.1    RSAL01005524    RVE40000.1    AAGJ04148968    ABLF02010095    ABLF02023797    RSAL01000142    RVE46021.1    ABLF02037175    ABLF02037177    AAGJ04142602    ABLF02004635    BABH01025621    GBHO01042097    JAG01507.1    ODYU01004340    SOQ44104.1    ABLF02024894    ABLF02024897    ODYU01011180    SOQ56761.1    ABLF02009832    ABLF02009835    RSAL01000210    RVE44232.1    ABLF02022524    ABLF02019640    ABLF02019643    ABLF02019649    RSAL01000260    RVE43346.1    GGMR01008791    MBY21410.1    ABLF02013766    GGMR01008668    MBY21287.1    ODYU01012570    SOQ58975.1    ABLF02013311    RJVU01027735    ROL48958.1    ABLF02039177    KB202199    ESO91835.1    ABLF02003967    ABLF02033230    ABLF02004032    ABLF02042646    ACPB03009534    GEZM01027265    JAV86789.1    NWSH01003159    PCG66844.1    GGMR01018884    MBY31503.1    RSAL01000009    RVE53882.1    ABLF02015617    ABLF02015622    ODYU01009390    SOQ53782.1    KK107242    EZA54533.1    MRZV01000115    PIK58358.1    LNIX01000005    OXA53581.1    AMQN01021160    AMQN01021161    KB298212    ELU09529.1    AAGJ04162991    ACPB03016567    ACPB03016568    GAKP01007365    JAC51587.1    UFQS01001897    UFQT01001897    SSX12663.1    SSX32106.1    GEZM01023604    JAV88283.1    GECZ01029139    JAS40630.1    ABLF02020246    ODYU01002004    SOQ38964.1    KK107128    EZA58416.1    KZ150145    PZC72904.1    RQTK01001146    RUS71879.1    BABH01033861    RSAL01000213    RVE44164.1    LNIX01000025    OXA42761.1    GBXI01005713    JAD08579.1    ABLF02021172    GGMR01004875    MBY17494.1    GEZM01010383    JAV94073.1    LNIX01000029    OXA41441.1    GGMR01003297    MBY15916.1    GECU01006037    JAT01670.1    AAGJ04038612    AAGJ04038613    LNIX01000016    OXA46212.1    GEBQ01029058    JAT10919.1    ABLF02006015   

Proteomes

UP000007819    UP000007110    UP000283053    UP000030746    UP000005204    UP000015103    + More
UP000218220    UP000053097    UP000230750    UP000198287    UP000014760    UP000271974   

PRIDE

H9JW23    H9JF09   

Pfam

PF00078   RVT_1        + More
PF01192   RNA_pol_Rpb6
PF13359   DDE_Tnp_4
PF16064   DUF4806
PF04500   FLYWCH
PF10551   MULE
PF04218   CENP-B_N
PF14033   DUF4246

Interpro

IPR018247   EF_Hand_1_Ca_BS        + More
IPR000477   RT_dom       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR020708   DNA-dir_RNA_polK_14-18kDa_CS       
IPR036161   RPB6/omega-like_sf       
IPR006110   Pol_omega/K/RPB6       
IPR012293   RNAP_RPB6_omega       
IPR027806   HARBI1_dom       
IPR032071   DUF4806       
IPR012337   RNaseH-like_sf       
IPR018289   MULE_transposase_dom       
IPR007588   Znf_FLYWCH       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR036388   WH-like_DNA-bd_sf       
IPR025340   DUF4246       

SUPFAM

SSF63562   SSF63562        + More
SSF53098   SSF53098       
SSF46689   SSF46689       

Gene 3D

3.60.10.10     3.90.940.10     1.10.10.10    

ProteinModelPortal

X1X3M6   J9M1L7   X1XHP1   J9M2W1   J9KUE4   J9M8J2   + More
A0A1Y1LHW9   J9M1M1   A0A2S2PTG2   J9L7Q2   J9KZJ3   W4ZD48   W4YFK8   W4XW95   X1XFA1   A0A3S2P4C8   V4ACF2   J9LMT7   J9LAK0   A0A2H1VXX2   A0A3S2N704   W4Z5Y3   J9KUZ8   J9LH36   A0A3S2NVZ8   X1WUB1   W4YLC1   J9L9L9   H9JW23   A0A0A9VZA8   A0A2H1VV53   J9M9Z7   A0A2H1WUL7   J9KBE8   A0A3S2TF04   J9M4G9   J9LBW7   A0A3S2LBW7   A0A2S2NW59   J9KD89   A0A2S2NVW0   A0A2H1X0U8   J9KRP2   A0A3N0YTD4   J9LP43   V4A9X1   J9LN28   J9KUZ7   X1XRK2   T1HR50   A0A1Y1MM80   A0A2A4J5P3   A0A2S2PPZ7   A0A3S2M8H5   X1XMW5   A0A2H1WLH6   A0A026WEZ7   A0A2G8LDL7   A0A226E9R7   R7USQ6   W4XFL6   T1HH44   A0A034WBB7   A0A336L7N8   A0A1Y1MRG1   A0A1B6ERU6   J9KF07   A0A2H1VFC9   A0A026WRV4   A0A2W1C4W6   A0A3S1ATS4   H9JF09   A0A3S2NCT4   A0A226DDU0   A0A0A1XB56   X1X811   A0A2S2NJY1   A0A1Y1N893   A0A226D9Z5   A0A2S2NGJ4   A0A1B6JR07   W4XFL7   A0A226DKY7   A0A1B6KHL6   J9M2M3  

KEGG

101740008    no KO assigned | (RefSeq) uncharacterized LOC101740008

GO

GO:0006360   GO:0003899   GO:0005666   GO:0005736   GO:0003677   GO:0006366   GO:0006383   GO:0005665   GO:0016021  

Length:

517

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00482

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00246

outside

1  -  517

 

 

Pi

74.070426

Theta

25.787029

Tajima's D

4.163806

CLR

0.151153

CSRT

0.999250037498125

Interpretation

Uncertain