Gene

KWMTBOMO16273

Pre Gene Modal

BGIBMGA014001

Annotation

PREDICTED:_lysozyme-like_[Bombyx_mori]

Location

Bomo_Chr28(+):3485118-3500211      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.991 Mitochondrial   Reliability : 1.384

CDS

ATGGCGAGCGGACGCGCATTTTTGTTTACATTAATAGTATTATCGTTATATCTCGCGAACACACAATGCAAGGTATACACTAGATGTAAATTGACGAGAGACTTATTAAAAAACAACTTCCCAAGGACGTTCATCAGTAATTGGGTGTGTTTAATCGAGCAGGGCAGCGATAGAAACACATCGGCTTTAGTCGTCAAATCGCCACGGAGGAAGTTCTACGGGTTGTTTCAAATAGGAAGTGAATGGTGCAAAGAAGGTCGCAAGGGTGGTAAATGCGACATTCCTTGCGAAGCGTTACTCGACGAAGACATAAAAGATGATGGGGTGTGTGCAATCAAGATATTCGAACAGGAAGGCTTCAAGTATTGGCCTAAATGGGAGGTCAGGTGCAAAGGCCAAACTCTGCCCGACATTGAAAAGTGTCCAGACTGGCAGCTACCACCGAGCCGCGCCAGTCCGCCGCGTGACAAGCGCTACCTAAAATCGGACAACAGCTACAAACTATTCAGAGGACGCAGGAACTTAAGCTCTATTAGAAATAAGATCTATTTACAATAG

Protein

MASGRAFLFTLIVLSLYLANTQCKVYTRCKLTRDLLKNNFPRTFISNWVCLIEQGSDRNTSALVVKSPRRKFYGLFQIGSEWCKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKYWPKWEVRCKGQTLPDIEKCPDWQLPPSRASPPRDKRYLKSDNSYKLFRGRRNLSSIRNKIYLQ

Similarity

Belongs to the glycosyl hydrolase 22 family.

Uniprot

H9JWT7   A5A142   A0A194PWQ8   A0A2W1BCW3   D1KRL0   A0A0G3DS02   + More
T2C8Z0   A0A346RAF2   A0A212EHF8   A0A212FDG2   A0A2A4IYE0   A0A0G3DPZ8   A0A2W1BF14   A0A2A4IYI6   A0A1A9WWI8   A0A1I8M1S3   A0A346RAF3   A0A0K8TZ63   A0A034WI40   A0A0A1XIJ6   A0A1I8NM15   A0A1W4WME1   B4MPJ4   A5A143   A0A0N1IHY7   A0A1L8E2X6   J3JVA8   A0A1L8E2R1   A0A0R3NN72   A0A1E1WP73   I1XB31   A0A336LQ21   B0WUD1   B4GGZ3   B4PA33   C0HBU0   A1BWC2   B4QF38   B4HQN0   A1ZBX6   A0A1Q3FMX9   B3NJW6   C5WLP0   A0A0R3NN78   A0A0R3NNL4   B5E170   B3MIT6   A1BWC3   A1BWC8   F4WTX5   A0A0C9PZN7   F4WTX4   A0A151JUZ2   A0A1W4V471   A0A1W4VHT7   A0A151ILU5   B0WUD2   A0A1S4G5X5   J9HIZ6   A0A2M4ASB4   A0A2M4ASA5   I1XB30   A0A195AUW1   A0A1Q3FRT2   A0A151ILU9   A0A3B0J3I7   A0A0L7LA82   Q7QJA6   A0A1Q3FRW6   A0A182I352  

Pubmed

19121390    17550822    26354079    28756777    19909380    25993013    + More
24155672    29910977    22118469    25315136    25348373    25830018    17994087    22516182    23537049    15632085    17550304    17028318    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    16547107    21719571    17510324    26227816    12364791    14747013    16137842    17210077   

EMBL

BABH01018634    BABH01018635    BABH01018636    BABH01018637    BABH01018638    EF517396    + More
ABP52098.1    KQ459588    KPI97757.1    KZ150204    PZC72261.1    GQ293366    ACX49765.1    KP056541    AKJ54523.1    KF146182    AGV28586.1    MH200942    AXS59152.1    AGBW02014899    OWR40919.1    AGBW02009059    OWR51772.1    NWSH01005468    PCG64182.1    KP056542    AKJ54524.1    KZ150254    PZC71797.1    PCG64183.1    MH200943    AXS59153.1    GDHF01032944    JAI19370.1    GAKP01004941    GAKP01004940    JAC54012.1    GBXI01011013    GBXI01003979    JAD03279.1    JAD10313.1    CH963849    EDW74033.1    EF517397    ABP52099.1    KQ460417    KPJ14884.1    GFDF01001078    JAV13006.1    APGK01051105    APGK01051106    BT127175    KB741181    AEE62137.1    ENN73097.1    GFDF01001077    JAV13007.1    CM000071    KRT02378.1    GDQN01002201    JAT88853.1    JQ754176    AFI81524.1    UFQT01000108    SSX20102.1    DS232104    EDS34910.1    CH479183    EDW35763.1    CM000158    EDW91364.1    BT059796    ACN12156.1    DQ867726    ABJ74304.1    CM000362    CM002911    EDX07949.1    KMY95313.1    CH480816    EDW48733.1    AE013599    AAF57435.2    AHN56436.1    GFDL01006105    JAV28940.1    CH954179    EDV55341.1    BT088855    ACS70798.1    KRT02379.1    KRT02380.1    EDY69086.1    CH902619    EDV35996.1    DQ867727    DQ867728    DQ867729    DQ867730    DQ867731    DQ867733    DQ867735    DQ867736    DQ867737    DQ867738    DQ867739    DQ867744    ABJ74305.1    ABJ74306.1    ABJ74307.1    ABJ74308.1    ABJ74309.1    ABJ74311.1    ABJ74313.1    ABJ74314.1    ABJ74315.1    ABJ74316.1    ABJ74317.1    ABJ74322.1    DQ867732    DQ867734    DQ867740    DQ867741    DQ867742    DQ867743    ABJ74310.1    ABJ74312.1    ABJ74318.1    ABJ74319.1    ABJ74320.1    ABJ74321.1    GL888345    EGI62332.1    GBYB01007023    JAG76790.1    EGI62331.1    KQ981732    KYN36556.1    KQ977086    KYN05860.1    EDS34911.1    CH477638    EJY57849.1    GGFK01010338    MBW43659.1    GGFK01010336    MBW43657.1    JQ754175    AFI81523.1    KQ976738    KYM75764.1    GFDL01004768    JAV30277.1    KYN05861.1    OUUW01000001    SPP73822.1    JTDY01002022    KOB72304.1    DQ007318    AAAB01008807    AAY24700.1    EAA04458.2    GFDL01004813    JAV30232.1    APCN01000197   

Proteomes

UP000005204    UP000053268    UP000007151    UP000218220    UP000091820    UP000095301    + More
UP000095300    UP000192223    UP000007798    UP000053240    UP000019118    UP000001819    UP000002320    UP000008744    UP000002282    UP000000304    UP000001292    UP000000803    UP000008711    UP000007801    UP000007755    UP000078541    UP000192221    UP000078542    UP000008820    UP000078540    UP000268350    UP000037510    UP000007062    UP000075840   

PRIDE

H9JWT7    A5A143    C0HBU0    A1ZBX6   

Pfam

PF00062   Lys

Interpro

IPR019799   Glyco_hydro_22_CS        + More
IPR023346   Lysozyme-like_dom_sf       
IPR001916   Glyco_hydro_22       
IPR000974   Glyco_hydro_22_lys       

SUPFAM

SSF53955   SSF53955       

CDD

cd00119  LYZ1

ProteinModelPortal

H9JWT7   A5A142   A0A194PWQ8   A0A2W1BCW3   D1KRL0   A0A0G3DS02   + More
T2C8Z0   A0A346RAF2   A0A212EHF8   A0A212FDG2   A0A2A4IYE0   A0A0G3DPZ8   A0A2W1BF14   A0A2A4IYI6   A0A1A9WWI8   A0A1I8M1S3   A0A346RAF3   A0A0K8TZ63   A0A034WI40   A0A0A1XIJ6   A0A1I8NM15   A0A1W4WME1   B4MPJ4   A5A143   A0A0N1IHY7   A0A1L8E2X6   J3JVA8   A0A1L8E2R1   A0A0R3NN72   A0A1E1WP73   I1XB31   A0A336LQ21   B0WUD1   B4GGZ3   B4PA33   C0HBU0   A1BWC2   B4QF38   B4HQN0   A1ZBX6   A0A1Q3FMX9   B3NJW6   C5WLP0   A0A0R3NN78   A0A0R3NNL4   B5E170   B3MIT6   A1BWC3   A1BWC8   F4WTX5   A0A0C9PZN7   F4WTX4   A0A151JUZ2   A0A1W4V471   A0A1W4VHT7   A0A151ILU5   B0WUD2   A0A1S4G5X5   J9HIZ6   A0A2M4ASB4   A0A2M4ASA5   I1XB30   A0A195AUW1   A0A1Q3FRT2   A0A151ILU9   A0A3B0J3I7   A0A0L7LA82   Q7QJA6   A0A1Q3FRW6   A0A182I352  

PDB

2RSC     E-value=2.79778e-19,     Score=230

KEGG

105842620    no KO assigned | (RefSeq) lysozyme-like

GO

GO:0003796   GO:0016021   GO:0008152   GO:0005615   GO:0050829  

SignalP

Position:   1 - 23,         Likelihood:  0.985687

 

 

Length:

185

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

6.64085

Exp number, first 60 AAs:

6.6408

Total prob of N-in:

0.07753

outside

1  -  185

 

 

Pi

174.326758

Theta

137.887082

Tajima's D

0.837302

CLR

0.177472

CSRT

0.609569521523924

Interpretation

Uncertain