Gene

KWMTBOMO16272

Pre Gene Modal

BGIBMGA014000

Annotation

PREDICTED:_leucine-rich_repeat-containing_protein_15_[Bombyx_mori]

Location

Bomo_Chr28(+):3457698-3479841      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.436 Nuclear   Reliability : 1.348

CDS

ATGAGGTTGAGCGGTATAGTGGGATTGCTCCTCGCGTTAAAACTATCAGAGGGTCAGTGGAGGTGTCCATCGTTAAGCAGCAGACCGGCGGCCGAGTGCTCCTGCGACCTGCCTCACACGTTGAGGTGTACCGGTGACCACACGGCGTTACAAATAATCGGACGTCATCTTCGAGAGCAGAGGGCGAGAAATAAGAACACCGCCATATCATTATTGGACTGCGCTTTGCGTGGAGTTACTGTACTCACTTCGGCGTCAGTGCAAGAGTTGGCTGGTGTTGGACTGCACGGGCTGGTGATTTCATCAGGAGACATTAGACGGGTGCAGCAAGGAGCGTTTGTTAGTCTTTCGTCTACACTAATGGCTTTGGGTTTACCCAACAACCAAATGCCTTCAGTGCCAACAGAATCTTTATTGCGTTTGTGGAGTCTAGACAGATTGGATTTGTCTAATAACAAGATACACAATTTGGAATCTAATTCCTTTAAGGGTATAAAGAACCTTACTTACTTAGACATAAGTGACAACCAATTGACAGATATTTCTCCTGACGCATTCAAGCCACTGGTGAAGTTGACAGTTCTAAGGCTTCGCGGGAATCTACTTAAAGTATCCGCTTTGGGATCGCTTAAGGAAGCACACATGTTGAAGGAATTGGATCTATCAAGTAATGCCCTAGAAGGCCCTTTGTGCTCGAATACAGTACCGGCTTTGAGTCGTTTAGAAACCTTACAGCTATCTGACAATACCTTTGCCAGCATCCGACGGGGCGCGTTAGCTGGTCTGTCGAATTTAACAAGTCTGAATCTACATAACAATCAGATTGACGTCTTAGAAGATTACGCTTTCAAGCATTTGACTAATTTGACGGATCTGGATTTATCTCATAATGAGATAGTTGCAGTTTCAAGTGCATCTCTAGCTCAACTATTCAACTTACGCCGTCTCGATTTATCCCACAATTTCCTCCGTTCGCTCTCCGCGGAGCCGCTGAAGTCACTGCAGAGCCTGACAGAGTTGTATCTTCATGATAACGATGTGTCTATGATAGATGACGGCGCTTTGGCTCAGCACAGGGGCCTCGGTCGCTTCACTATTGAAGATAATCCATTGAACTGTGACTGTTTAATGGCTAGCTTCGCTAGGTGGCTTCGCGAGGCGCATTTATCTCAAGCGGATAAATCGGCAGCTGTTTGCACGACGCCCCCTCATTTAGAAGGGGGCCTTATATCCAGATTATCGAAAAACAAATTATGCGATGACAACGACCACGTTGAAGCGAAGCTAAAAGAAAATTATGACTTTAATAAAGAAAATACGATATCTTTTAATGAAAAAGATGGAGAAGGAAGCAGTTTAGACGATGATTCATATTTGGATAAAATAGATGGATTAGATGATGACGTGTACGACGAAGAATTAGAGGTTCCTTCGGAAGAAGATTTGCCGATCTCCAAATCTAAGGTCCGTCTTCTGGATGCCTGGTATGAAGATGAAGAGGTCCATCTGTCGTGGGTGGTAGACCCACCTTCGACGAGACATTACCGGTGCACGGGAGTGACCGTGTCCAGGGGTGGTGGAATAGCGAAACACGTGGCTTGTCACCGGGCTTCACCAGCCAATATTCTGTTAAGGGGACTAAAGATAGACCCTCTCGATCAGTATACCTTCTGTCTGGCGTTAGAAGAAATGGACGACATGGATGTTCCTCTGTCTCTGGTGTTAGGCTGTGGTCCGCCTCAGGTTGTGAGGAAACGCGCACCGTTTGCTACGGCTGTGCCAGTCGTTGTTACCGCTTCACCGGGAATCGAAAGTTACAGGGTCTCCGAAGTACGATCCAACGTGACCAGTGACGGTGTACTGACAGTACTCATCTCGATAATGGGTTTACCACAGCGCTTACAGAATCTCAGATCGCAGCATACCGACATGAAATACCCGTTTAACTGTTTTGTGGTTTTAGCAGTTCTCTCTGAGGGTTCTTTGGTGGCCCAAAAGGACACCCGTTGTCAGTCCAACCTGGAGGTCACCATGGAAGGCCTAATAAGAGGACCTTATGAAGTGTGTGCCACCTTATCCAAATTCAAGAGAGAAGATGCTCATCCAATCTGCGTGGTGCCTCAACTGTTAGAGCCATTCGGTTCTCAAATCAAGGCGAGCTTTAGGGGCCTTAATACAGCATTGATAGGGATCGCTTTATGCCTGATGATCGTGGTTGTGGCTTTAATATGCTTCGTGAGGAAAATGCTGAAGAAACATACCGATTTTGAAGGTCACAGATGCTTTAGGCCTGATCCGGTGCAAGAACCGGACAGTCCTAGAGCGAATTACGTGATGCTGACAGCTACTTCTAAATTATGA

Protein

MRLSGIVGLLLALKLSEGQWRCPSLSSRPAAECSCDLPHTLRCTGDHTALQIIGRHLREQRARNKNTAISLLDCALRGVTVLTSASVQELAGVGLHGLVISSGDIRRVQQGAFVSLSSTLMALGLPNNQMPSVPTESLLRLWSLDRLDLSNNKIHNLESNSFKGIKNLTYLDISDNQLTDISPDAFKPLVKLTVLRLRGNLLKVSALGSLKEAHMLKELDLSSNALEGPLCSNTVPALSRLETLQLSDNTFASIRRGALAGLSNLTSLNLHNNQIDVLEDYAFKHLTNLTDLDLSHNEIVAVSSASLAQLFNLRRLDLSHNFLRSLSAEPLKSLQSLTELYLHDNDVSMIDDGALAQHRGLGRFTIEDNPLNCDCLMASFARWLREAHLSQADKSAAVCTTPPHLEGGLISRLSKNKLCDDNDHVEAKLKENYDFNKENTISFNEKDGEGSSLDDDSYLDKIDGLDDDVYDEELEVPSEEDLPISKSKVRLLDAWYEDEEVHLSWVVDPPSTRHYRCTGVTVSRGGGIAKHVACHRASPANILLRGLKIDPLDQYTFCLALEEMDDMDVPLSLVLGCGPPQVVRKRAPFATAVPVVVTASPGIESYRVSEVRSNVTSDGVLTVLISIMGLPQRLQNLRSQHTDMKYPFNCFVVLAVLSEGSLVAQKDTRCQSNLEVTMEGLIRGPYEVCATLSKFKREDAHPICVVPQLLEPFGSQIKASFRGLNTALIGIALCLMIVVVALICFVRKMLKKHTDFEGHRCFRPDPVQEPDSPRANYVMLTATSKL

Uniprot

H9JWT6   A0A3S2P4I5   A0A2A4JBU9   A0A194PXK8   A0A0N1IGR0   A0A212EHG0   + More
A0A2W1BHI0   A0A139WG08   A0A2P8ZFC3   A0A2J7QMA3   A0A1B6CMM5   U4TZ04   U4TS28   A0A067QU56   N6TXK8   A0A1B6DKY4   A0A1Y1LUN3   A0A1B6L9J4   A0A0M8ZZL7   E0VS99   A0A088AR32   A0A2A3EC16   J9JT07   A0A2H8TG86   A0A2S2QPZ1   A0A2S2NCR9  

Pubmed

19121390    26354079    22118469    28756777    18362917    19820115    + More
29403074    23537049    24845553    28004739    20566863   

EMBL

BABH01018633    RSAL01000025    RVE52152.1    NWSH01001960    PCG69567.1    KQ459588    + More
KPI97758.1    KQ460417    KPJ14885.1    AGBW02014899    OWR40918.1    KZ150204    PZC72260.1    KQ971352    KYB26737.1    PYGN01000075    PSN55203.1    NEVH01013215    PNF29702.1    GEDC01022574    JAS14724.1    KB630319    ERL83536.1    KB630320    ERL83537.1    KK852948    KDR13390.1    APGK01051103    APGK01051104    KB741181    ENN73096.1    GEDC01010973    JAS26325.1    GEZM01046319    JAV77329.1    GEBQ01019598    JAT20379.1    KQ435791    KOX74350.1    DS235748    EEB16255.1    KZ288289    PBC29277.1    ABLF02026942    GFXV01001280    MBW13085.1    GGMS01010588    MBY79791.1    GGMR01001967    MBY14586.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000007266    UP000245037    UP000235965    UP000030742    UP000027135    UP000019118    UP000053105    UP000009046    UP000005203    UP000242457    UP000007819   

PRIDE

H9JWT6   

Pfam

PF13855   LRR_8        + More
PF00560   LRR_1

Interpro

IPR001611   Leu-rich_rpt        + More
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR000483   Cys-rich_flank_reg_C       
IPR032675   LRR_dom_sf       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JWT6   A0A3S2P4I5   A0A2A4JBU9   A0A194PXK8   A0A0N1IGR0   A0A212EHG0   + More
A0A2W1BHI0   A0A139WG08   A0A2P8ZFC3   A0A2J7QMA3   A0A1B6CMM5   U4TZ04   U4TS28   A0A067QU56   N6TXK8   A0A1B6DKY4   A0A1Y1LUN3   A0A1B6L9J4   A0A0M8ZZL7   E0VS99   A0A088AR32   A0A2A3EC16   J9JT07   A0A2H8TG86   A0A2S2QPZ1   A0A2S2NCR9  

PDB

3ZYJ     E-value=3.10421e-20,     Score=245

KEGG

101737175    no KO assigned | (RefSeq) leucine-rich repeat-containing protein 15

GO

GO:0016021   GO:0005515   GO:0006869   GO:0009116   GO:0016763   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

SignalP

Position:   1 - 18,         Likelihood:  0.996841

 

 

Length:

786

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.03664

Exp number, first 60 AAs:

0.00056

Total prob of N-in:

0.00044

outside

1  -  723

TMhelix

724  -  746

inside

747  -  786

 

 

Pi

177.981678

Theta

156.81307

Tajima's D

0.145989

CLR

0.402265

CSRT

0.407379631018449

Interpretation

Uncertain