SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16268  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013998
Annotation
heme_oxygenase_[Bombyx_mori]
Full name
Heme oxygenase      
Location in the cell
PlasmaMembrane   Reliability : 0.97
 

Sequence

CDS
ATGTCTGAACAAGATCTATTCACGACACGCATGAGAAAAGCGACTCGGAAAATACATTCTGTCAGCGATGCCTTGGTCAATGCGAAATTTGCGATATCGTTGAGAGACCATACAGTATGGGGTGGAGGCCTGTTTGTCTTCTACCATATTTTTGCATATCTTGAAGATGCAAAAGAGAGATTAAATATGCCAGAATTTAATAAGCTGTTTGTGCATGAAATTCTTTACAGAAAGAAGGCATTTGAGCAAGATCTGCAACACTACCTTGGTGACAACTGGAGGTCAATACCTAAATCCTTGGCTCTAGAGAACTATCTACAACATTTACAAGACCTGGAAAGAGACAATCCCAAGCTCTTAATGGCCTATGTCTATCATTTGTATTTAGGACTCCTGAGCGGTGGACAGATTTTAGCCAAGAAGAGGAGGGTATTTGGTGAAAAAAACGAACAACCAAACACATATTATGTAGACAAAGTAACTGATTTTGCTGCTGTAGACATAAATAAATTGAAAAATGAGTTCCGTGAAGCAATGAACCAAATAGCGACGACAATGTCTTCAGAGGAGCAAGCGACATTCATAGAGGAGAGCAATCAGGTGTTCATTATGAACAATCTGATAGTGAACTCTGTTGAGGGCCAGAATAAGGTTCTATATGGCTTGTTGTGCAAAGCCTCAGCTGTAGTTTTTGTTGTTGCAAGTTTATTGTTTGCATATAAGTTACACAGAGGATAA
Protein
MSEQDLFTTRMRKATRKIHSVSDALVNAKFAISLRDHTVWGGGLFVFYHIFAYLEDAKERLNMPEFNKLFVHEILYRKKAFEQDLQHYLGDNWRSIPKSLALENYLQHLQDLERDNPKLLMAYVYHLYLGLLSGGQILAKKRRVFGEKNEQPNTYYVDKVTDFAAVDINKLKNEFREAMNQIATTMSSEEQATFIEESNQVFIMNNLIVNSVEGQNKVLYGLLCKASAVVFVVASLLFAYKLHRG

Summary

Description
Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
Catalytic Activity
heme b + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = biliverdin IXalpha + CO + Fe(2+) + H(+) + 3 H2O + 3 oxidized [NADPH--hemoprotein reductase]
Similarity
Belongs to the heme oxygenase family.
Feature
chain  Heme oxygenase
EC Number
1.14.14.18
EMBL
BABH01018618    DQ443164    ABF51253.1    RSAL01001752    RSAL01000025    RVE40713.1    + More
RVE52155.1    KQ460417    KPJ14876.1    GAIX01006070    JAA86490.1    ODYU01009271    SOQ53566.1    KQ459588    KPI97748.1    KZ150355    PZC71236.1    NWSH01000142    PCG79119.1    GDQN01007097    JAT83957.1    AGBW02008152    OWR54095.1    JTDY01005150    KOB67316.1    PYGN01000029    PSN57003.1    KK852433    KDR23962.1    GEDC01027638    GEDC01011784    JAS09660.1    JAS25514.1    NEVH01007395    PNF35979.1    KQ435876    KOX70144.1    GECZ01028421    JAS41348.1    GL888002    EGI69271.1    GFDF01000664    JAV13420.1    AB194707    BAD69622.1    GFDF01000665    JAV13419.1    GECU01031055    JAS76651.1    ADTU01001034    GFDF01000666    JAV13418.1    KQ979039    KYN23253.1    AJWK01006018    KQ976598    KYM79585.1    KQ981855    KYN34882.1    GL732532    EFX85559.1    KQ983002    KYQ48404.1    LBMM01002990    KMQ94105.1    GECL01002121    JAP04003.1    ACPB03004822    GAHY01001699    JAA75811.1    GDKW01001669    JAI54926.1    NNAY01004881    OXU17304.1    GBBI01001482    JAC17230.1    JR051871    AEY61580.1    KQ978479    KYM93663.1    KQ760478    OAD60242.1    GL449553    EFN82497.1    GBGD01002702    JAC86187.1    GL438658    EFN68652.1    KK107293    QOIP01000005    EZA53267.1    RLU22326.1    GDRN01103429    JAI58087.1    KZ288234    PBC31427.1    KQ414590    KOC70406.1    GDIP01079964    JAM23751.1    LRGB01000568    KZS17819.1    GDIQ01075761    JAN18976.1    GDIQ01075760    JAN18977.1    GDIQ01060011    JAN34726.1    GDIQ01060012    JAN34725.1    GDIQ01158040    JAK93685.1    GDIQ01006383    JAN88354.1    GGFM01004677    MBW25428.1    GGFM01004744    MBW25495.1    GGFJ01008737    MBW57878.1    GGFJ01008741    MBW57882.1    GGFJ01008740    MBW57881.1    KQ434960    KZC12641.1    DS235750    EEB16311.1    GGFK01011934    MBW45255.1    APCN01002686    GGFK01011935    MBW45256.1    ATLV01020564    KE525303    KFB45396.1    DS231958    EDS29033.1    GGFM01007699    MBW28450.1    CVRI01000002    CRK86965.1    AAAB01008978    EAA13618.5    GDAI01000055    JAI17548.1    LJIJ01000643    ODM95621.1    GAPW01004214    JAC09384.1    KP994552    ALC74332.1    AXCM01001966    GDIP01175254    JAJ48148.1    JXUM01087050    JXUM01087051    KQ563607    KXJ73601.1    ADMH02002130    ETN58590.1    JXUM01010916    KQ560320    KXJ83074.1    AXCN02000286    GDIQ01071416    JAN23321.1    CH477487    EAT40116.1    GANO01002728    JAB57143.1    GFDL01007064    JAV27981.1    GFDL01007050    JAV27995.1    IACF01003739    LAB69349.1    GDIP01007898    JAM95817.1    GGMS01000554    MBY69757.1   
Pfam
PF01126   Heme_oxygenase
Interpro
IPR016053   Haem_Oase-like        + More
IPR002051   Haem_Oase       
IPR016084   Haem_Oase-like_multi-hlx       
SUPFAM
SSF48613   SSF48613       
Gene 3D
PDB
4RAJ     E-value=1.92223e-25,     Score=285

Ontologies

Topology

Length:
245
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
53.42187
Exp number, first 60 AAs:
14.32657
Total prob of N-in:
0.68348
POSSIBLE N-term signal
sequence
inside
1  -  36
TMhelix
37  -  54
outside
55  -  118
TMhelix
119  -  138
inside
139  -  217
TMhelix
218  -  240
outside
241  -  245
 
 

Population Genetic Test Statistics

Pi
350.033113
Theta
225.132327
Tajima's D
1.68556
CLR
0.212406
CSRT
0.826458677066147
Interpretation
Uncertain
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