Gene

KWMTBOMO16265

Pre Gene Modal

BGIBMGA013997

Annotation

PREDICTED:_uncharacterized_protein_LOC105842614_[Bombyx_mori]

Location

Bomo_Chr28(+):3255088-3262185      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Nuclear   Reliability : 3.816

CDS

ATGGCCTTCGAGCAGCAGAGCGCCGCCGCCATGCAGGCTCTCCAGCATCAGCTGCTCAGAGGTCTGAGCGGCGCGGGCGGGTCGGGCGGCATGTCGGCGGCCGCGGCCATGATGCAGTTCACTCCGCTGCTGTACTCCTACCAGCTCGCCATGGCGCAGGCCTCCGCGCTCGGCAAGAGATATTCAATGATGGAAGAATCCACAAATCCTGAGGAATCTTCGAATGCAATTACTATACAAGTTGATGTCCATCATCGGCATTATTCACAACTCAGTGCATCAATCGCTACCACAAGCCATGACTGTGTGAATGAACCTGAAACAACGAGTGATCTTCCTTCAATCCACCGTGATTATCCAAAAACAGCTGCACAGCGAATGGCAGAGTATAGAGCTCGGAAAAAAAAGGAAACTCCAATAGTGAATCATCGAAAACATAAAAAATCAGACGCAGAGCGTGCAAAAGAGTATAGAGCCCGAAAAAAAGCGAAGATCCAATCAGCAGACGCAGAGCGTGCAAAAGAGTATAGAGCCCGAAACAAGGCTCAAATCCAAGAACACACAAGCCAAAGTCAGAACTTTGTTGAGTCAACATCAATTCAACAATCAGAACATGAAACTAATCATCTGGCTTACACGGATTTTCATCGTCATCATCTGGCTCATGATGAATTTCAAAAGAAATTTGTTCGAAATTCATTTGGTTATGTGTGCTCAGTTTGTGAAAGACTGTGGTTTAAAGATGACTTACGATCTGCATCCCTTCAACATAATGCAATCTTGAAAACAATAGTTCCTCATCTTGATATAAAGGACGTTGCTCTCTGTAATACCTGTGTAGCATCTTTAAATAATAATAGTATTCCTGTGATGGCTTCTTATAATGGATTCAAATTTCCGAAGAAGCCCGATTATTTACCGCCATTAGACTTAGTATCTGAACGATTGATTTCTCCGCGAATCCCATTCATGCAGATTAGGAGATTAAGACACGTTAACGGTCAGTATGGTATTTATGGACAAATAATCAATGTTCCAGTGTCTATTGATTCAATGGTTCGTACTCTCCCCAGAAGTTTATCTGATGATCACTGTATCAATGTGCACATTAAACGCAAGAAAATCCATAAATCGAGTTATTTGCATGGTATAATAAACAAAGGTACAATAAAGATTTGGCTTCAATTTTTATTAAAGTCGCCATTATATACTATGTATGATATCAAAATTGATGAATCCTTTTTCGAAAACAATGACATTGATACTATACCTCAAGATGAAATAAGCGAACACGTACCAATCGAAGAAAGTCTGGTATCTCAGCAGCAAACATTGATGTGGAATGAAGAAAAATATTTAAGATTAGCCCCAGGAGAAAAAAATCTTCCACATAGTTTACTTTTTGATGAACACGCGGAGGAATTGTCTTTTCCTGCAATTTATTTGGGCCAATTTCGTACGTTTCGTGATGGAGTACGAGTAACTCCATATACAATGGCTACAAGTGAACTTAGACGCTCGGACCGTCGTGCTGTTACTCCACATCATGTATTATACGTGGCAATGAAAATAATGAGACTTCGAGTTCGTGATTCATTAACAGTTGCCTTCAAACATATAGGAAAAGACACAAAAATCACACGTGAACAAATTGAAAATGAAGATTATGTCAACAATTGCATTGAAACTAATTTTGCATTTCTGAAATCAATTCCCAATTCATTATGGTACTGGGCTGATAAAAAGAAAAATTTATTTGCAATGATTAGACAGCTAGGTAAACCAACAATATTTCTCACTATTAGTGCAAATGAAATTGGATGGACTGATTTACTTCAATTATTATATAAGTTGAAAAATAATGGAGCCGAATTATCAAAAAAAGATGCTGAAGAATTACACTATCTTGAAAAAGTTACTCTGATTAATGAAGATTCTGTAACGTGCGCAATCTATTTTAATAAACTGGTAAACGTACTCTTGAATATATTACAGTCTCCTAAGAAGAGTCCGTTTGGAAAATATTATGTGATGCATTATTTCAAAAGAATTGAATTTCAGCACCGAGGTAGTCCACATGCCCATACATTACTGTGGCTTGCAAATGCACCGAATGATGCTTTAGGCGAGAATAAAATGGATGCAATTTCACTGATTAATCATCTTATCTCGATTTCATCGAAAGAAGCATCAGAGCATATAAAATTACAAACACACAAGCACTCATTCACCTGTTACAAAAGAATATCGGCTCATAGACCTCAACAATGTCGTTTTGAAGCTCCATTCTTGCCTTCTCGTTCTACAGAAATTTTATTACCTATCCAACAGGATGAAATTGGTTTTAATCGTTATTTGCAATCTTACAGAAATATTCGAATTAATCTCGAAAATAATGATTATGAGGATTTTGATAGTTTTTATCAGCAAAATAATATTTCATCAGATGATGAATATCGCAATATACTTCGAGCGGGAATCAAGAGACCAAGAGTTTTTATAAAACGCGAACCCAGTGAGAAATGGCATAATCCATTTAATCCGTTTATTCTGAATCTGGTAAAATCGAATATGGACATCCAGTTCATAACAGAGGAATATTCGTGTGCCCAGTATGTAGCTGAGTATGTCAATAAAACAAATCGCGGAATAAGTAATTTACAACGTGAAATCATCAAATGTATAGATGAACACCCGGAGTTCGATGTTGTGGAAATCACAAGAAAATTGGGAGTTGAGATGCTGAACAGTGTTGAAATACCAAATCAAGAAGCTGCCTGGTATCTTTTAAGAGAGCCGATGTCGAAAAGCTCTTCTGTTATAGTTTATATTCCAGCGATGTGGCCGGAGGAGCGGCAAAAACTCAAGAAAACCACTAAAGAGTAG

Protein

MAFEQQSAAAMQALQHQLLRGLSGAGGSGGMSAAAAMMQFTPLLYSYQLAMAQASALGKRYSMMEESTNPEESSNAITIQVDVHHRHYSQLSASIATTSHDCVNEPETTSDLPSIHRDYPKTAAQRMAEYRARKKKETPIVNHRKHKKSDAERAKEYRARKKAKIQSADAERAKEYRARNKAQIQEHTSQSQNFVESTSIQQSEHETNHLAYTDFHRHHLAHDEFQKKFVRNSFGYVCSVCERLWFKDDLRSASLQHNAILKTIVPHLDIKDVALCNTCVASLNNNSIPVMASYNGFKFPKKPDYLPPLDLVSERLISPRIPFMQIRRLRHVNGQYGIYGQIINVPVSIDSMVRTLPRSLSDDHCINVHIKRKKIHKSSYLHGIINKGTIKIWLQFLLKSPLYTMYDIKIDESFFENNDIDTIPQDEISEHVPIEESLVSQQQTLMWNEEKYLRLAPGEKNLPHSLLFDEHAEELSFPAIYLGQFRTFRDGVRVTPYTMATSELRRSDRRAVTPHHVLYVAMKIMRLRVRDSLTVAFKHIGKDTKITREQIENEDYVNNCIETNFAFLKSIPNSLWYWADKKKNLFAMIRQLGKPTIFLTISANEIGWTDLLQLLYKLKNNGAELSKKDAEELHYLEKVTLINEDSVTCAIYFNKLVNVLLNILQSPKKSPFGKYYVMHYFKRIEFQHRGSPHAHTLLWLANAPNDALGENKMDAISLINHLISISSKEASEHIKLQTHKHSFTCYKRISAHRPQQCRFEAPFLPSRSTEILLPIQQDEIGFNRYLQSYRNIRINLENNDYEDFDSFYQQNNISSDDEYRNILRAGIKRPRVFIKREPSEKWHNPFNPFILNLVKSNMDIQFITEEYSCAQYVAEYVNKTNRGISNLQREIIKCIDEHPEFDVVEITRKLGVEMLNSVEIPNQEAAWYLLREPMSKSSSVIVYIPAMWPEERQKLKKTTKE

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Feature

chain  ATP-dependent DNA helicase

Uniprot

H9JWT3   J9K9R0   J9JYX1   J9M7J3   H9J7F3   H9J482   + More
A0A0C9Q9F9   A0A212FGN1   B0WBF3   B0WS82   B0X370   B0X2H4   B0WHR0   B0WQS5   A0A2W1BWM2   B0X8F9   B0W7Q6   B0XKN7   B0X3H8   B0W9W4   B0XE87   B0XBP3   J9M8Z2   B0XLK1   B0XHK1   B0WJB6   H9IWZ3   A0A1Y1NKE2   A0A2H9T4X5   S2JVK3   A0A0B7NNE4   A0A226D8L9   A0A226F1P1   A0A226EB64   A0A226F5N4   A0A0B7NFP9   A0A226DVC3   A0A163J913   A0A226ED60   A0A1C7MZM0   A0A0B7MTX6   A0A226DNF6   B0WH72   W4X9N8   W4YZ12   W4Z5F3   A0A1C7MYM4   A0A3B3CMZ8   A0A1A8U683   A0A1A8AX16   A0A1A8UT69   G3NDK2   A0A146TGF8   A0A146RI12   A0A146RH25  

EC Number

3.6.4.12

Pubmed

19121390    22118469    28756777    28004739    29150518    29451363    + More

EMBL

BABH01018610    BABH01018611    BABH01018612    BABH01018613    BABH01018614    ABLF02018835    + More
ABLF02018837    ABLF02018838    ABLF02009660    ABLF02060474    ABLF02010848    ABLF02010851    ABLF02010852    ABLF02024887    BABH01013754    BABH01032532    BABH01032533    BABH01032534    GBYB01011013    JAG80780.1    AGBW02008637    OWR52892.1    DS231879    EDS42392.1    DS232066    EDS33709.1    DS232310    EDS39572.1    DS232289    EDS39197.1    DS231939    EDS27927.1    DS232044    EDS32999.1    KZ149968    PZC76143.1    DS232488    EDS42495.1    DS231855    EDS38200.1    DS233927    EDS32356.1    DS232315    EDS39870.1    DS231866    EDS40531.1    DS232811    EDS45920.1    DS232646    EDS44392.1    ABLF02010071    DS234515    EDS34328.1    DS233163    EDS28452.1    DS231958    EDS29051.1    BABH01021151    BABH01021152    GEZM01005450    JAV96167.1    NSIT01000220    PJE78258.1    KE123980    EPB86818.1    LN733547    CEP17045.1    LNIX01000030    OXA41097.1    LNIX01000001    OXA63699.1    LNIX01000005    OXA54773.1    OXA64511.1    LN732935    CEP16237.1    LNIX01000011    OXA48651.1    LT553140    SAM00100.1    LNIX01000004    OXA55350.1    LUGH01000897    OBZ82310.1    LN719792    CEP08567.1    LNIX01000016    OXA46187.1    DS231933    EDS27530.1    AAGJ04118364    AAGJ04092821    AAGJ04070883    LUGH01001176    OBZ81506.1    HAEJ01003372    SBS43829.1    HADY01021084    SBP59569.1    HAEJ01010808    SBS51265.1    GCES01094404    JAQ91918.1    GCES01118596    JAQ67726.1    GCES01118597    JAQ67725.1   

Proteomes

UP000005204    UP000007819    UP000007151    UP000002320    UP000014254    UP000054107    + More
UP000198287    UP000078561    UP000093000    UP000007110    UP000261560    UP000007635   

PRIDE

H9JWT3    H9J7F3    H9J482    H9IWZ3   

Pfam

PF05970   PIF1        + More
PF14214   Helitron_like_N
PF16563   P66_CC
PF13359   DDE_Tnp_4
PF18358   Tudor_4
PF18359   TUDOR_5
PF02689   Herpes_Helicase
PF13538   UvrD_C_2
PF14529   Exo_endo_phos_2
PF02902   Peptidase_C48
PF02801   Ketoacyl-synt_C
PF00443   UCH
PF08659   KR
PF14765   PS-DH
PF00109   ketoacyl-synt
PF16197   KAsynt_C_assoc
PF00107   ADH_zinc_N
PF00698   Acyl_transf_1
PF00540   Gag_p17
PF02338   OTU
PF04843   Herpes_teg_N
PF03372   Exo_endo_phos

Interpro

IPR010285   DNA_helicase_pif1-like        + More
IPR025476   Helitron_helicase-like       
IPR027417   P-loop_NTPase       
IPR032346   P66_CC       
IPR003593   AAA+_ATPase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR027806   HARBI1_dom       
IPR003323   OTU_dom       
IPR041292   Tudor_4       
IPR041291   TUDOR_5       
IPR009072   Histone-fold       
IPR000558   Histone_H2B       
IPR003840   DNA_helicase       
IPR000014   PAS       
IPR035965   PAS-like_dom_sf       
IPR013087   Znf_C2H2_type       
IPR027785   UvrD-like_helicase_C       
IPR005135   Endo/exonuclease/phosphatase       
IPR003653   Peptidase_C48_C       
IPR038765   Papain-like_cys_pep_sf       
IPR028889   USP_dom       
IPR016039   Thiolase-like       
IPR001394   Peptidase_C19_UCH       
IPR014030   Ketoacyl_synth_N       
IPR020843   PKS_ER       
IPR013968   PKS_KR       
IPR002364   Quin_OxRdtase/zeta-crystal_CS       
IPR020801   PKS_acyl_transferase       
IPR029063   SAM-dependent_MTases       
IPR020841   PKS_Beta-ketoAc_synthase_dom       
IPR001227   Ac_transferase_dom_sf       
IPR020807   PKS_dehydratase       
IPR036736   ACP-like_sf       
IPR014031   Ketoacyl_synth_C       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR013149   ADH_C       
IPR032821   KAsynt_C_assoc       
IPR011032   GroES-like_sf       
IPR042104   PKS_dehydratase_sf       
IPR014043   Acyl_transferase       
IPR036291   NAD(P)-bd_dom_sf       
IPR000071   Lentvrl_matrix_N       
IPR011011   Znf_FYVE_PHD       
IPR006928   Herpes_teg_USP       
IPR019787   Znf_PHD-finger       
IPR003410   HYR_dom       
IPR036514   SGNH_hydro_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF56219   SSF56219       
SSF47113   SSF47113       
SSF55785   SSF55785       
SSF54001   SSF54001       
SSF50129   SSF50129       
SSF53335   SSF53335       
SSF47336   SSF47336       
SSF53901   SSF53901       
SSF52151   SSF52151       
SSF51735   SSF51735       
SSF57903   SSF57903       

Gene 3D

3.60.10.10     1.10.20.10     1.10.1200.10     3.10.129.110     3.40.366.10     3.40.47.10     3.40.50.1110    

CDD

cd00130  PAS

ProteinModelPortal

H9JWT3   J9K9R0   J9JYX1   J9M7J3   H9J7F3   H9J482   + More
A0A0C9Q9F9   A0A212FGN1   B0WBF3   B0WS82   B0X370   B0X2H4   B0WHR0   B0WQS5   A0A2W1BWM2   B0X8F9   B0W7Q6   B0XKN7   B0X3H8   B0W9W4   B0XE87   B0XBP3   J9M8Z2   B0XLK1   B0XHK1   B0WJB6   H9IWZ3   A0A1Y1NKE2   A0A2H9T4X5   S2JVK3   A0A0B7NNE4   A0A226D8L9   A0A226F1P1   A0A226EB64   A0A226F5N4   A0A0B7NFP9   A0A226DVC3   A0A163J913   A0A226ED60   A0A1C7MZM0   A0A0B7MTX6   A0A226DNF6   B0WH72   W4X9N8   W4YZ12   W4Z5F3   A0A1C7MYM4   A0A3B3CMZ8   A0A1A8U683   A0A1A8AX16   A0A1A8UT69   G3NDK2   A0A146TGF8   A0A146RI12   A0A146RH25  

KEGG

105842614    no KO assigned | (RefSeq) uncharacterized LOC105842614

GO

GO:0003678   GO:0000122   GO:0006281   GO:0005524   GO:0006310   GO:0000723   GO:0016021   GO:0046982   GO:0003677   GO:0000786   GO:0003676   GO:0008234   GO:0008270   GO:0016740   GO:0016579   GO:0016491   GO:0036459   GO:0005198   GO:0004519  

Length:

961

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.1567699999999

Exp number, first 60 AAs:

12.14547

Total prob of N-in:

0.54839

POSSIBLE N-term signal

sequence

outside

1  -  961

 

 

Pi

206.72602

Theta

195.783349

Tajima's D

0.217015

CLR

18.916321

CSRT

0.435578221088946

Interpretation

Uncertain