SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16256
Annotation
cuticular_protein_glycine-rich_24_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.662 Nuclear   Reliability : 1.504
 

Sequence

CDS
ATGCCGAGAGGCGAACTAGATCACTTTTACTGCTACACACGAGTTATTTTGGTGGCATCGTTGGCCGTGGTTGCCTTTGCCAAGGAGGAGAAAGGCACACCGAAGGCAGTCGAAGAGAAGAAACAAGACAAAAGGGGCATCTATGACATAGGATCTTATGGAGGACATAATTTCGGAGGTAGCGATGAAGGCTACGGCGGTCACGAAAGCTATGGAGGGCACGAAGGTATCAGCTTCGGTCACCAAGAAGGACACGACTTCGGAGGCGAAAGCTACAACTTAGGCGGACATGGAGGCGGCGAGTACGGCAGCAGCGGCGGCGACTGGAAGCCAATTGCCAGCGAAGGCGACTACCACCACGGTCATCATGAACACCACGAGCACATCAAAACTGTTGAGGTGGTAAAGAAGGTGCCTGTTCCGTATACAGTCGAGAAACACGTCCCCTATACCGTCGAGAAGAAAGTACCCTATGAGGTGAAAGTGCCCGTACCTCAGCCCTACACCGTCGAAAAGAAAGTTCCCTTTACCGTCAAGGAATACGTCAAATACCCAGTATACGTACCTGAACCTTACACCGTTGAAAAGAAAGTACCTTATGAAGTCAAGGTCCACGTTGACAAGCCTTACGAAGTCAAAGTCAAAGTGCCCACTCCCTACACCGTTGAGAAGAAAATCCCTTACGAAGTGAAAGTGCCCGTTCCCCAGCCCTACACTGTCGAGAAAAAGGTCCCAGTTCCAGTGAAATACGAAGTTAAGGTGCCCCAACCATACGAAGTCATTAAGAAAGTGCCTTACGAAGTCAAAGTACCAGTCGACAGGCCCTACAATGTATACGTGCCTAAGCCTTACCCCGTCCATGTTGAAAAGCCCTACCCAGTGACCGTACACAAGCCAGTGCCCTACGAAGTTAAGGTCCCCGTTGACAAGCCCTACAAGGTCGAAGTAGAGAAGCCCTATCCGGTCCCCGTTAAAGTGCCAGTACCAAAACCTTACGAAGTCATCAAGAAAATCCCTTACACCGTCGAAAAGAAAGTGCCTTATGAAGTCAAAGTGCCTATTGACAAGCCCTACCCGGTCTACAAGGAAGTTCAAGTGCCGCTCGTCAAAGAAGTACCTTACCCGGTCAAGTACCACGTCCCTATCTACTTCAAGAAAGAGGAGGAACACCACCAACACCACCAACACCACGGATGGCATTGA
Protein
MPRGELDHFYCYTRVILVASLAVVAFAKEEKGTPKAVEEKKQDKRGIYDIGSYGGHNFGGSDEGYGGHESYGGHEGISFGHQEGHDFGGESYNLGGHGGGEYGSSGGDWKPIASEGDYHHGHHEHHEHIKTVEVVKKVPVPYTVEKHVPYTVEKKVPYEVKVPVPQPYTVEKKVPFTVKEYVKYPVYVPEPYTVEKKVPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQPYTVEKKVPVPVKYEVKVPQPYEVIKKVPYEVKVPVDRPYNVYVPKPYPVHVEKPYPVTVHKPVPYEVKVPVDKPYKVEVEKPYPVPVKVPVPKPYEVIKKIPYTVEKKVPYEVKVPIDKPYPVYKEVQVPLVKEVPYPVKYHVPIYFKKEEEHHQHHQHHGWH

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 27,         Likelihood:  0.524522
 
 
Length:
400
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.92751
Exp number, first 60 AAs:
0.92751
Total prob of N-in:
0.03545
outside
1  -  400
 
 

Population Genetic Test Statistics

Pi
187.083075
Theta
173.571491
Tajima's D
0.244655
CLR
201.164746
CSRT
0.444927753612319
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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