Gene

KWMTBOMO16255

Pre Gene Modal

BGIBMGA013993

Annotation

PREDICTED:_uncharacterized_protein_LOC105841315_[Bombyx_mori]

Location

Bomo_Chr28(+):3060233-3060699      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.564 Nuclear   Reliability : 1.705

CDS

ATGAACCTGCGTTCTAAGGTTTGGGCTGCCAAGACTTCGCTCAAGGGCTCAGGAATAACACTCTCCGAGTTCTTGACTAAAAGACGTCATGATATTTTTATGTCTGCACGTCAACGCTTCGGAGTAACCAGGTGCTGGACTCGGGACGGCTGCGTTTACGTTCAGGGATCGGATGGGGTGCGACATCGTGTCGAAGTGATGTCTGATCTGGATGCTCTTGCCAAGACGACTATGGCGGAAGATGCTGCCCAAAAGAGGGCACAAACCGGCAAGGACACAAAGGAGTCTGCAGCTGCGACCAGACCAAAACGTGCGGCTGCGAACAAGAAGTAG

Protein

MNLRSKVWAAKTSLKGSGITLSEFLTKRRHDIFMSARQRFGVTRCWTRDGCVYVQGSDGVRHRVEVMSDLDALAKTTMAEDAAQKRAQTGKDTKESAAATRPKRAAANKK

Uniprot

H9JWS9   H9JND1   A0A2A4ITX7   A0A2A4J0P1   A0A0L7LEM3   A0A2A4JPZ6   + More
A0A2A4JP60   A0A0L7K3B3   A0A0L7KNA4   A0A2W1C1G2   A0A2H1W7N3   A0A2H1X0E0   A0A0L7K1Y0   A0A0L7L7Q1   A0A0L7KMJ9   A0A0L7K490   A0A0L7KIU7   A0A0L7L318   A0A0L7KW56   A0A2W1BKL8   A0A2A4JRK8   A0A2A4JAE4   A0A0L7KWV6   A0A2W1BHY6   A0A2A4JIA9   A0A2A4ISJ1   A0A2A4JVB8   A0A0L7KQ82   A0A2W1B638   A0A0L7LT08   A0A0L7KL53   A0A3Q0J8Z8   A0A3Q0IRU1   A0A0L7LN09  

Pubmed

19121390    26227816    28756777   

EMBL

BABH01018592    BABH01019446    BABH01019447    BABH01019448    BABH01019449    BABH01019450    + More
NWSH01007488    PCG62946.1    NWSH01004248    PCG65306.1    JTDY01001444    KOB73845.1    NWSH01000800    PCG74117.1    NWSH01000964    PCG73374.1    JTDY01012534    KOB52261.1    JTDY01008093    KOB64747.1    KZ149916    PZC77943.1    ODYU01006869    SOQ49099.1    ODYU01012456    SOQ58773.1    JTDY01016995    KOB51870.1    JTDY01002460    KOB71369.1    JTDY01009052    KOB64154.1    JTDY01010801    JTDY01009435    KOB57999.1    KOB63512.1    JTDY01009601    KOB63242.1    JTDY01003374    KOB69654.1    JTDY01005020    KOB67468.1    KZ150083    PZC73827.1    NWSH01000709    PCG74665.1    NWSH01002122    PCG69097.1    JTDY01004815    JTDY01001265    KOB67717.1    KOB74342.1    KZ150113    PZC73314.1    NWSH01001465    PCG71162.1    PCG71163.1    NWSH01008089    PCG62701.1    NWSH01000574    PCG75564.1    JTDY01007409    KOB65221.1    KZ150731    PZC70355.1    JTDY01000147    KOB78598.1    JTDY01009138    KOB64057.1    JTDY01000521    KOB76815.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000079169   

PRIDE

H9JWS9    H9JND1   

Pfam

PF01582   TIR        + More
PF00027   cNMP_binding

Interpro

IPR035897   Toll_tir_struct_dom_sf        + More
IPR000157   TIR_dom       
IPR004244   Transposase_22       
IPR000595   cNMP-bd_dom       
IPR014710   RmlC-like_jellyroll       
IPR018490   cNMP-bd-like       

SUPFAM

SSF52200   SSF52200        + More
SSF51206   SSF51206       

Gene 3D

3.40.50.10140     2.60.120.10    

CDD

cd00038  CAP_ED

ProteinModelPortal

H9JWS9   H9JND1   A0A2A4ITX7   A0A2A4J0P1   A0A0L7LEM3   A0A2A4JPZ6   + More
A0A2A4JP60   A0A0L7K3B3   A0A0L7KNA4   A0A2W1C1G2   A0A2H1W7N3   A0A2H1X0E0   A0A0L7K1Y0   A0A0L7L7Q1   A0A0L7KMJ9   A0A0L7K490   A0A0L7KIU7   A0A0L7L318   A0A0L7KW56   A0A2W1BKL8   A0A2A4JRK8   A0A2A4JAE4   A0A0L7KWV6   A0A2W1BHY6   A0A2A4JIA9   A0A2A4ISJ1   A0A2A4JVB8   A0A0L7KQ82   A0A2W1B638   A0A0L7LT08   A0A0L7KL53   A0A3Q0J8Z8   A0A3Q0IRU1   A0A0L7LN09  

KEGG

105841315    no KO assigned | (RefSeq) uncharacterized LOC105841315

GO

GO:0016021   GO:0007165  

PANTHER

PTHR11505  

Length:

110

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02366

Exp number, first 60 AAs:

0.02366

Total prob of N-in:

0.54362

inside

1  -  110

 

 

Pi

244.108683

Theta

129.76716

Tajima's D

2.645939

CLR

0

CSRT

0.960501974901255

Interpretation

Uncertain