Gene

KWMTBOMO16241

Pre Gene Modal

BGIBMGA013988

Annotation

PREDICTED:_alpha-N-acetylgalactosaminidase-like_[Papilio_xuthus]

Location

Bomo_Chr28(+):2794884-2801935      View in EpiBrowser

Full name

Alpha-galactosidase      

Location in the cell

Lysosomal   Reliability : 2.252

CDS

ATGGGGTGGATGTCGTGGGGGTATTACATGTGCGGCGCGGATTGCGAACAAAATCCGGACAAATGCTTAGATGAGAAATTAATTTTGTCAGTGGCAGACACATTTTACAATGAAGGTTACCAGGAAGCAGGTTTTGAATATATCATTATCGATGACTGCTGGTCCGAACATCACAGAGACAGAGACGGAAGACTTGTGCCTGATAGTCTGAGATTTCCTAATGGCATGAAGTACATTTCTGACTATATACATTCGCGTAATCTCAAATTCGGTATGTACACAAATGTAGCTGATGTCACTTGTATGAGATATCAAGGCTCAAAAGGACATTTTAAAGTCGACGCTGACACTTTTGCTCAATGGGGTGTCGATTATATCAAAGTGGATGGGTGTTTTGTGGGAGAACAGTACTTAAATAATGCATACATACATTTTGGTGGGTATTTAAACAAAACCAATAGACCTATGGTATATTCATGTAGCTGGCCCTATTACATAGAGTTTATACACAATAAGAAGCCGGATTACCCTACTATATCAAAACACTGTAATCTATGGCGGAATTACCATGATGTCGTGACATCTTGGAGCGCGGTCAAAAACATTATCCAGCACTACGAAGATGAATATTCTGGTTTGGAAAAGTACCACGGACCCGGTCATTGGAATGACCCGGATATGCTAATTTTCGGTACCGATTCCCTGACAGAAGCACAAAGCAAAATTCATATAAGTGTTTACGCAATGCTCTCGGCGCCTTTGCTCTTGAGTTGCGACATGACCCGAGTGAAGGGATACGAAAAGAACCTGCTCTTGAATTTGGACCTCATGGCGATCGCTCGGGATCCGTTGGGGATCATGGCTCGACCTTATAGGATTGATTACATAACTTTATGGGTGAAACCAAGGATGCCGAGGAAGGGCGATATATACCCGTCCTATTCGCTCGCCCTGGTCAATGTCAGCGGTCAGAAACGTACAATAACCGTGAGGCCTTCGAACTACGGCCTCAATTGTACTGACGGGTACAGTGTGATGGACATTTTTAGTAAGAGATTTTTGAAAAATATAACTTTTGAAGATAGCATTGACGTGACCGTTCCTTCTGAAGATGTCATATTATATACTTTGTTCCCGTTGTGA

Protein

MGWMSWGYYMCGADCEQNPDKCLDEKLILSVADTFYNEGYQEAGFEYIIIDDCWSEHHRDRDGRLVPDSLRFPNGMKYISDYIHSRNLKFGMYTNVADVTCMRYQGSKGHFKVDADTFAQWGVDYIKVDGCFVGEQYLNNAYIHFGGYLNKTNRPMVYSCSWPYYIEFIHNKKPDYPTISKHCNLWRNYHDVVTSWSAVKNIIQHYEDEYSGLEKYHGPGHWNDPDMLIFGTDSLTEAQSKIHISVYAMLSAPLLLSCDMTRVKGYEKNLLLNLDLMAIARDPLGIMARPYRIDYITLWVKPRMPRKGDIYPSYSLALVNVSGQKRTITVRPSNYGLNCTDGYSVMDIFSKRFLKNITFEDSIDVTVPSEDVILYTLFPL

Subunit

Homodimer.

Similarity

Belongs to the glycosyl hydrolase 27 family.

Feature

chain  Alpha-galactosidase

Uniprot

H9JWS4   A0A3S2PHR1   A0A0N0P9S8   A0A2A4IW76   A0A2W1BR43   A0A293LAS9   + More
L7LZY4   A0A131Z618   A0A224YR53   E9HCD9   A0A147BIJ7   D6WTE0   A0A2P8ZLY1   A0A067RL82   A0A0L7QQI1   A0A154PHX5   A0A0P5IJY8   A0A164M2V8   A0A0P5MNZ2   A0A0P5Q8D5   D1ZZP5   A0A0P6ENW6   A0A0P5V6J8   A0A2J7Q6R5   S4NSM8   A0A0P5Q526   A0A3R7M4M2   Q7Q6H3   A0A182V8Y9   A0A182P2V6   A0A1Z5L4A9   Q17AU1   A0A182XMD5   A0A182K837   B4JP37   I4DIL5   A0A0N1PES9   A0A182I269   A0A1B6FU31   A0A182KPZ7   A0A1S4F9T9   A0A1Y1M843   A0A0A1X480   A0A131YVT3   A0A0K2T4T3   A0A0C9R4U7   A0A310SAX6   A0A2W1BQY8   A0A195FQA7   A0A0M8ZS78   E9IEL9   J3JUA1   A0A3M7RVB3   A0A151WST7   D2T1A8   A0A147BG42   A0A2S2PVG7   B4M8H2   A0A034VJ62   A0A026WYH3   A0A182FHK7   A0A0K8WDV6   A0A182H7D4   A0A182T5G1   A0A195BWB5   A0A1A9ZVN6   A0A0P5PTP7   A0A182QQ15   A0A2A4JJP4   A0A2S2PSU3   A0A1A9UT81   V5GMA3   B4KHN3   A0A0P5GIW0   J9JRF8   A0A2J7QEQ5   W5J5I0   A0A0P5HGD4   J9K999   A0A0P6HSF3   A0A2A3EAC4   U4UPP5   A0A067RV68   J9JWZ7   B7PDZ6   A0A0P5P1G6   A0A191UR38   A0A1A9Y6Y0   A0A1A9WLA3   A0A1J1HJ44   A0A0P5CX52   W8B716   E2A7Y1   A0A0P4XF76   A0A0P5S3C2   A0A0P4XZR8   A0A182WLA6   A0A0P5WG04   A0A0P5DDU7  

EC Number

3.2.1.-

Pubmed

19121390    26354079    28756777    25576852    26830274    28797301    + More
21292972    29652888    18362917    19820115    29403074    24845553    23622113    12364791    14747013    17210077    28528879    17510324    17994087    22651552    20966253    28004739    25830018    21282665    22516182    30375419    25348373    24508170    26483478    20920257    23761445    23537049    27142481    24495485    20798317   

EMBL

BABH01018570    RSAL01000029    RVE51771.1    KQ459166    KPJ03548.1    NWSH01006121    + More
PCG63648.1    KZ149970    PZC76085.1    GFWV01000121    MAA24851.1    GACK01008581    JAA56453.1    GEDV01002139    JAP86418.1    GFPF01005925    MAA17071.1    GL732619    EFX70604.1    GEGO01005279    JAR90125.1    KQ971352    EFA06705.2    PYGN01000019    PSN57511.1    KK852444    KDR23773.1    KQ414786    KOC60877.1    KQ434896    KZC10800.1    GDIQ01212410    JAK39315.1    LRGB01003101    KZS04676.1    GDIQ01153464    JAK98261.1    GDIQ01139344    JAL12382.1    KQ971338    EFA01818.1    GDIQ01060719    JAN34018.1    GDIP01119606    GDIP01079951    JAL84108.1    NEVH01017454    PNF24276.1    GAIX01014012    JAA78548.1    GDIQ01119290    JAL32436.1    QCYY01002113    ROT72774.1    AAAB01008960    EAA11949.3    GFJQ02004737    JAW02233.1    CH477330    EAT43367.1    CH916372    EDV99462.1    AK401133    BAM17755.1    KQ458751    KPJ05313.1    APCN01000126    GECZ01016138    GECZ01015544    JAS53631.1    JAS54225.1    GEZM01037887    JAV81864.1    GBXI01008395    JAD05897.1    GEDV01005905    JAP82652.1    HACA01003085    CDW20446.1    GBYB01007777    JAG77544.1    KQ765605    OAD53851.1    KZ149927    PZC77532.1    KQ981335    KYN42658.1    KQ435878    KOX70065.1    GL762647    EFZ20978.1    BT126814    AEE61776.1    REGN01002531    RNA27511.1    KQ982769    KYQ50857.1    FM986353    CAX20733.1    GEGO01005666    JAR89738.1    GGMS01000258    MBY69461.1    CH940654    EDW57498.2    GAKP01016413    JAC42539.1    KK107079    EZA60164.1    GDHF01006436    GDHF01002966    JAI45878.1    JAI49348.1    JXUM01028208    JXUM01028209    KQ560814    KXJ80784.1    KQ976401    KYM92575.1    GDIQ01133997    JAL17729.1    AXCN02000446    NWSH01001168    PCG72287.1    GGMR01019932    MBY32551.1    GALX01005719    JAB62747.1    CH933807    EDW12312.1    GDIQ01246250    JAK05475.1    ABLF02027051    ABLF02027053    NEVH01015307    PNF27047.1    ADMH02002096    ETN59246.1    GDIQ01233405    JAK18320.1    ABLF02030053    GDIQ01022778    JAN71959.1    KZ288322    PBC28159.1    KB632308    ERL91995.1    KDR23774.1    ABLF02027580    ABJB010864680    ABJB010932589    ABJB011004459    DS692880    EEC04818.1    GDIQ01136536    JAL15190.1    KU365924    ANJ04640.1    CVRI01000001    CRK86297.1    GDIP01164198    JAJ59204.1    GAMC01009600    JAB96955.1    GL437442    EFN70460.1    GDIP01251680    JAI71721.1    GDIQ01093583    JAL58143.1    GDIP01234586    JAI88815.1    GDIP01215792    GDIP01099894    LRGB01003056    JAM03821.1    KZS04814.1    GDIP01158942    JAJ64460.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000218220    UP000000305    UP000007266    + More
UP000245037    UP000027135    UP000053825    UP000076502    UP000076858    UP000235965    UP000283509    UP000007062    UP000075903    UP000075885    UP000008820    UP000076407    UP000075881    UP000001070    UP000075840    UP000075882    UP000078541    UP000053105    UP000276133    UP000075809    UP000008792    UP000053097    UP000069272    UP000069940    UP000249989    UP000075901    UP000078540    UP000092445    UP000075886    UP000078200    UP000009192    UP000007819    UP000000673    UP000242457    UP000030742    UP000001555    UP000092443    UP000091820    UP000183832    UP000000311    UP000075920   

PRIDE

H9JWS4   

Pfam

PF16499   Melibiase_2        + More
PF17801   Melibiase_C
PF17450   Melibiase_2_C

Interpro

IPR013785   Aldolase_TIM        + More
IPR002241   Glyco_hydro_27       
IPR000111   Glyco_hydro_27/36_CS       
IPR017853   Glycoside_hydrolase_SF       
IPR013780   Glyco_hydro_b       
IPR041233   Melibiase_C       
IPR035373   Melibiase/NAGA_C       

SUPFAM

SSF51445   SSF51445       

Gene 3D

3.20.20.70     2.60.40.1180    

CDD

cd14792  GH27

ProteinModelPortal

H9JWS4   A0A3S2PHR1   A0A0N0P9S8   A0A2A4IW76   A0A2W1BR43   A0A293LAS9   + More
L7LZY4   A0A131Z618   A0A224YR53   E9HCD9   A0A147BIJ7   D6WTE0   A0A2P8ZLY1   A0A067RL82   A0A0L7QQI1   A0A154PHX5   A0A0P5IJY8   A0A164M2V8   A0A0P5MNZ2   A0A0P5Q8D5   D1ZZP5   A0A0P6ENW6   A0A0P5V6J8   A0A2J7Q6R5   S4NSM8   A0A0P5Q526   A0A3R7M4M2   Q7Q6H3   A0A182V8Y9   A0A182P2V6   A0A1Z5L4A9   Q17AU1   A0A182XMD5   A0A182K837   B4JP37   I4DIL5   A0A0N1PES9   A0A182I269   A0A1B6FU31   A0A182KPZ7   A0A1S4F9T9   A0A1Y1M843   A0A0A1X480   A0A131YVT3   A0A0K2T4T3   A0A0C9R4U7   A0A310SAX6   A0A2W1BQY8   A0A195FQA7   A0A0M8ZS78   E9IEL9   J3JUA1   A0A3M7RVB3   A0A151WST7   D2T1A8   A0A147BG42   A0A2S2PVG7   B4M8H2   A0A034VJ62   A0A026WYH3   A0A182FHK7   A0A0K8WDV6   A0A182H7D4   A0A182T5G1   A0A195BWB5   A0A1A9ZVN6   A0A0P5PTP7   A0A182QQ15   A0A2A4JJP4   A0A2S2PSU3   A0A1A9UT81   V5GMA3   B4KHN3   A0A0P5GIW0   J9JRF8   A0A2J7QEQ5   W5J5I0   A0A0P5HGD4   J9K999   A0A0P6HSF3   A0A2A3EAC4   U4UPP5   A0A067RV68   J9JWZ7   B7PDZ6   A0A0P5P1G6   A0A191UR38   A0A1A9Y6Y0   A0A1A9WLA3   A0A1J1HJ44   A0A0P5CX52   W8B716   E2A7Y1   A0A0P4XF76   A0A0P5S3C2   A0A0P4XZR8   A0A182WLA6   A0A0P5WG04   A0A0P5DDU7  

PDB

1KTC     E-value=4.31122e-75,     Score=715

KEGG

101735629    K01204 alpha-N-acetylgalactosaminidase [EC:3.2.1.49] | (RefSeq) alpha-N-acetylgalactosaminidase-like

PATHWAY

00603    Glycosphingolipid biosynthesis - globo and isoglobo series - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0005975   GO:0004553   GO:0016798   GO:0008152   GO:0004557   GO:0046477   GO:0005737   GO:0009311   GO:0016139   GO:0016021   GO:0004812   GO:0003824   GO:0005634   GO:0006261   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR11452  

Length:

380

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01793

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00877

outside

1  -  380

 

 

Pi

191.609186

Theta

166.449978

Tajima's D

0.941335

CLR

0.082838

CSRT

0.644117794110294

Interpretation

Uncertain