Silkworm Genome Informatics Database

Gene

KWMTBOMO16240

Pre Gene Modal

BGIBMGA013907

Annotation

PREDICTED:_pikachurin_[Bombyx_mori]

Location

Bomo_Chr28(-):2736644-2782073 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.751

CDS

ATGATTAAAAACAATAATTACACAGTAACCGGGGAGATTTCTAAACTGAACGATGGCTTGAAGAGTTTAATCGAAGACGGAATCAGTAGAGCGGATATTAATATCATAGCTGACGATGAGAGGGAAAAAGAAGACCCAAAGGAATACACGACGCTTGGCCCCAATCTAGAGCAGAAGGTGCCAGGCGGAACAGGCTCCCCAGCCTGGACTGCTGCAGTCGAGACCTGCAAATGCGACAGCTGCACGGAAGGAAGGTGCTTATGCCACCTCAACCCTGGAAGGTGTAAATCAGATCTGAACGTATCGACTCCGCGTTTCTCGGGAGCTTCTTGGATAGCTTTTCAAGCTCTGCGCGGTGCTTACAAGCGGGTCAGGGCGCGGCTGCGAGTCCGACCCGAGCGTGCCAGGGGCGTTTTGCTGCTTACCGGCGAACACGACGACCTGTCCGGCGACTATTTAGCGCTTCTGTTGAGGAACGGACACGTGGAACTGAGGTTCGACTGTGGGAGCGGCGCTGGTGTGCTCCGGTCGCCGGAGCCGGTCCGTCTCGGACGTTGGAACACCATATCGATCTACCGCCACCGATGGGACGCCTGGTTGAGGCTCAACAGTGGGAAGAGAGTTCGGGGACGATCGAAGGGTCTGTTCTCCCGCATGACGTTCCGGGAGCCGGTGTGGCTGGGCGGGACGGGCAACACGACCGGGCTTCAGAACAAGCTCGGCCTCTCTGAAGGTCTCCTCGGCTGCGTCGACTTCTTGCGCGTGAATGGTGACACGTACCGCCTGATCAAGGACTCCGTCGCCACTCTGGATATCAGTGAATGCGCGCCAACTTTAGCGCCATGGAGGCCCACAAACGAAGCCACCACGATACGAGTCTCGAAACACAGCAACGACGTTCAAACACGAGCTATTTACGACATTAATGACATTGTACACTTCGAGGACAACGACCTCGTTATGAGAGATCCCGAAACGCACCCCCGAGATCAGAACACACTTGATAACTCCGTTGTTCCATCGCTCTACGATTATACAACCAAAATACACACTAAAACGAATATTGTGAACGATAAATTAGCGGCTGGTAATGAAAACGATATAAAAAGTGATGGGATTAAAACGATAAAAGAAGATAATGATAATTGCGAGTGTCATCATGGCGGCGGCTGCGTCAACGGTGTTTGCCTGTGTCCATTAGGGTACGCGGGAGTCAAATGTGAAATCACATTGGATTTGAAGGTGCCTCGCTTCAACGGGTCGTCGTATCTCCGGCTGCCAGGCCTCGGCAACTCGGCTCAGTCCTGGCTCGACATTCAGCTAACACTGAAGCCCACAAACGGGGACGGTCTGGTGCTGTACGACTCGGAACGCGCGAGCGGCGACGGAGATTTCTTCTCGTTACACCTGAGGGACTACTTCGTGGAGTTTGCCTTCGATCTCGGCTCAGGGATCGCTCTCGTGAGATCGGCGTTCCCGTTGAAGCCTAATGAATGGCACCGGGTGTCTGTCAGTCGGTCGGGGAGACACGCGACCCTCCGGGTGAGGACCGCACTCGGAGTGACGTCACGCGCTGTGACGTCACGCGGCACGTCCAGGCGTCTCACGATGCACCAGCCGATGCTGCTGGGGGGCGCCCCCCACCCCATTCCGCCGAGGTTGGCTCTGCGGAAAAGTTTCAGCGGATGCATTGGACAGTTGGTGATAAACGATGAGGAGCTATCGGTGGTCGCATCGGCTCTCGGCGGTCTCAACGTGGACAATTGTGACGAGCCTCACAACAATACGTGCACGGACCGGAAACTGTGCGAGGAAACATTAGACCCGATGCCGGTGTACCCGCGGAACGAGACAGAGCTGGACGTACGCCATTCGATAGTCGCGAAGAAGGGCTTCAAACTGAAAACGCACAAAACGAAGCCGAAGAAACGTAGTCGGGCCCGCGAGGCTTACAAGACCAAGTACTCCGTCAAGAAGCACGACTACTACACTAAAGGGGGCGAGGTGCTGTCCGCGGGCGACACGTACATGCAAGTCAAGTACTTGAATGCGAACGAAATTAATTGGGGGGACACGAACTCGTACCCAAGCTTCAGTGGCGTTGACAGCTTCATACACATCGATGACGACGAGACCATGAAAAGATTACTGAGCTACACGCTCGACATAAACATCCGCTTCCGATCGGTGACGTCAGACGGCCTGCTGGTGTGGAGCGGCCGCTCGCCCCTCTCCTCCCCGGGAGACTTCCTCTCGCTCGCCGTCGAGAGCTCCGTGCTCGTCTTCAGATACGACTTGGGCAGTGGCGAGGTGGTCATCATAGCTAACCGCACCAAAGTTGACGACGGCTTGTGGCACAGAGCGCGAGCTACAAGGAACCGCCAGGCTGGTGTTCTGGAGGTGGACGGTTTGGGTTCGGTCGGGAACATATCGCCCGGGAAACACAAACAGCTCAACACCGAGAACGGTTTGTATATAGGTGGCTTACCGTCGATAGAGGTCAACACTAAAGGTAAATACAAGAGCGGTTTGGTCGGCTGCGTCTCACAGATATCTTTGAGTGGTGACTTTGACATTCCGCTTTCACTGTCAAAACTCCCGCACACCATTACGAACAATGTCGGCAGATGCGCTCCGTGA

Protein

MIKNNNYTVTGEISKLNDGLKSLIEDGISRADINIIADDEREKEDPKEYTTLGPNLEQKVPGGTGSPAWTAAVETCKCDSCTEGRCLCHLNPGRCKSDLNVSTPRFSGASWIAFQALRGAYKRVRARLRVRPERARGVLLLTGEHDDLSGDYLALLLRNGHVELRFDCGSGAGVLRSPEPVRLGRWNTISIYRHRWDAWLRLNSGKRVRGRSKGLFSRMTFREPVWLGGTGNTTGLQNKLGLSEGLLGCVDFLRVNGDTYRLIKDSVATLDISECAPTLAPWRPTNEATTIRVSKHSNDVQTRAIYDINDIVHFEDNDLVMRDPETHPRDQNTLDNSVVPSLYDYTTKIHTKTNIVNDKLAAGNENDIKSDGIKTIKEDNDNCECHHGGGCVNGVCLCPLGYAGVKCEITLDLKVPRFNGSSYLRLPGLGNSAQSWLDIQLTLKPTNGDGLVLYDSERASGDGDFFSLHLRDYFVEFAFDLGSGIALVRSAFPLKPNEWHRVSVSRSGRHATLRVRTALGVTSRAVTSRGTSRRLTMHQPMLLGGAPHPIPPRLALRKSFSGCIGQLVINDEELSVVASALGGLNVDNCDEPHNNTCTDRKLCEETLDPMPVYPRNETELDVRHSIVAKKGFKLKTHKTKPKKRSRAREAYKTKYSVKKHDYYTKGGEVLSAGDTYMQVKYLNANEINWGDTNSYPSFSGVDSFIHIDDDETMKRLLSYTLDINIRFRSVTSDGLLVWSGRSPLSSPGDFLSLAVESSVLVFRYDLGSGEVVIIANRTKVDDGLWHRARATRNRQAGVLEVDGLGSVGNISPGKHKQLNTENGLYIGGLPSIEVNTKGKYKSGLVGCVSQISLSGDFDIPLSLSKLPHTITNNVGRCAP

Uniprot

A0A0N0PA43 A0A0N1IP75 A0A2A4JFL1

Pubmed

26354079

EMBL

KQ459166 KPJ03546.1 KQ460689 KPJ12744.1 NWSH01001563 PCG70857.1 + More

Proteomes

UP000053268 UP000053240 UP000218220

Pfam

PF02210 Laminin_G_2 + More
PF00054 Laminin_G_1

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR001791   Laminin_G
IPR013032   EGF-like_CS

SUPFAM

SSF49899 SSF49899

ProteinModelPortal

A0A0N0PA43 A0A0N1IP75 A0A2A4JFL1

PDB

3SH5 E-value=1.58667e-19, Score=240

KEGG

101741412 no KO assigned | (RefSeq) pikachurin

GO

GO:0005515 GO:0003887 GO:0006260 GO:0005634 GO:0006261 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

Length:

879

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0178199999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00102

outside

1 - 879

Pi

213.269002

Theta

169.874277

Tajima's D

0.76103

CLR

0.324404

CSRT

0.594920253987301

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics