SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16236  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013986
Annotation
PREDICTED:_uncharacterized_protein_LOC101747151_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.287 Mitochondrial   Reliability : 1.111
 

Sequence

CDS
ATGGAGCTCTCAAATTTGTTTCACTCTTTACCATGGTATAAACCAGACTGGTGCTACCCAAGTATGAGTAAAGAGAATTACGAACTGTTAAAACAATGCAATGATTTGCCCAAAACTGAATTCTCAGATGACATTGAAGATATCATTAATAGGAGCAAGAATTTCTCAATTCCATTCCCGATTGAAAGTGTCAGGTTAGATAAACTGAAAAAACACCGACCCATTGATAGACTCAAGAGAAATATCTCAGGAACCTACCCAATTATACACGAGAGGATCTTGATGCTTATGACGCACTTCCTATTGTACAAACGTGAATTTGGTAGTAGCATAGAGAAAGCATTTTACAAGGACATGACGATTCCGGAACTCATAGACAGATTGTTGCTGAAAAGAGCAGTCTCGTTCATGGGTGAATTAGACAGTTATTTATTGCTCAGTGGAGAATCTGGTGAAGACGGATGGGAAAACGTAGGGACACTGCAGCAACGTCCACCATTGCTGCTGGAGAATGTATTGAGCTACGATGAGATGAAGCTATCAGCGTTTCTTTTCGTCAGCGGACCAACTGAATGTATTAACGACGGCTCCAGACATAACTCCGGTGTAGTTAAAGATGACGACATCGAACAAGAGGCAATTATTATAGGCGCGATCGGGCCGCGTTTCGAACGTACCAATCGCATGGACTACGAGGACATCGTGATATCGAGCACACAGAACAGTGAGGAGCGCGGCTACGGCGAGCACGTGACGCCGACCACGTGTCTGCACGTGCTGCGACACACGTACACGCGCGACGCCAGCCTCGCCAAGCACGCCTGGAGGCAGCTGTGGGCCGAGCTGTACCAGGTGCACAGCTACACGTACGAGGAGCTGAGCGCGCGGCTCGCGGGGGCGGCCTCGGACCGCTACGTGAAGCTGCCGCGGGGGGGCGCCTGGTTCGACAACGAGGTCTACTACAAGCGGATCTGCATCCTCGCGGAGACCGTGCTGCTGGAGGCCGAGGGGCGGGCTCGAGGCCGGAGCGTGTTCCTCAACGTGGTGGGCTGCGGACTGGGAGTGTGGAAGATATCCCCTCACCAGACCGACGTGTACGTGCTCACCTTCCTCGAACGCATCCGCGCCATGCTGGACGAGGAGGCACTCGATCACATCACAGACGTCAACTTCGCCTACATACGTGCTTCTGATAATGTCACTGCGTTATTCACGAAAACAAATGAAATTGAAAATTCAACGTCAACTGTCAAAAGTTTGTTTGTTGCCAATAAAAAACACCCTAAAGGCGGCGTGAGCGTGCAGCTGGAGGACAGGGAGCCGGCGAGCAGGCTGCACGGGCGGCACCGGGGCAAGCTGCTCGTCCTCATCTACCCCTGGGACGGGAACGCGCACCCGGGGAACGAGTTCTGGTTAGGTAGTTTGACGGGCTCGGGCGACCCGGCGGCCGCGTGCTCCACCCAGGTGGCGGAGCTGCACAACGCGCACGTGAACCCGCGCGTCGCCGCCGCCAACACGCGCGTCGCCGCGCACGCCGCCGTGCTGCCGCTGCGGGACTGCGCCGAGCGACCCTAG
Protein
MELSNLFHSLPWYKPDWCYPSMSKENYELLKQCNDLPKTEFSDDIEDIINRSKNFSIPFPIESVRLDKLKKHRPIDRLKRNISGTYPIIHERILMLMTHFLLYKREFGSSIEKAFYKDMTIPELIDRLLLKRAVSFMGELDSYLLLSGESGEDGWENVGTLQQRPPLLLENVLSYDEMKLSAFLFVSGPTECINDGSRHNSGVVKDDDIEQEAIIIGAIGPRFERTNRMDYEDIVISSTQNSEERGYGEHVTPTTCLHVLRHTYTRDASLAKHAWRQLWAELYQVHSYTYEELSARLAGAASDRYVKLPRGGAWFDNEVYYKRICILAETVLLEAEGRARGRSVFLNVVGCGLGVWKISPHQTDVYVLTFLERIRAMLDEEALDHITDVNFAYIRASDNVTALFTKTNEIENSTSTVKSLFVANKKHPKGGVSVQLEDREPASRLHGRHRGKLLVLIYPWDGNAHPGNEFWLGSLTGSGDPAAACSTQVAELHNAHVNPRVAAANTRVAAHAAVLPLRDCAERP

Summary

EMBL
BABH01018557    KQ459166    KPJ03543.1    BABH01018558    BABH01018559    BABH01018560    + More
KQ460689    KPJ12747.1    ODYU01007498    SOQ50318.1    KZ149970    PZC76090.1    AGBW02014237    OWR42043.1    GAIX01003657    JAA88903.1    JTDY01000039    KOB79241.1    GEZM01036097    JAV82980.1    GEZM01036098    JAV82979.1    GBXI01014231    JAD00061.1    GAKP01017593    GAKP01017592    JAC41360.1    GAKP01017589    JAC41363.1    LJIG01009049    KRT83858.1    GBXI01008898    JAD05394.1    GAMC01010573    JAB95982.1    GEZM01074086    JAV64679.1    GBXI01001584    JAD12708.1    GBXI01000555    JAD13737.1    KQ971348    EFA04874.1    GAKP01013186    JAC45766.1    GAMC01018161    JAB88394.1    GEZM01019121    JAV89864.1    GDHF01019032    JAI33282.1    NEVH01013195    PNF30104.1    GAMC01006687    GAMC01006686    JAB99868.1    GDHF01028203    GDHF01017058    JAI24111.1    JAI35256.1    CH916370    EDW00170.1    GL769036    EFZ10832.1    GAKP01007237    JAC51715.1    APGK01032677    KB740848    ENN78655.1    APGK01042182    APGK01042183    KB741002    ENN75744.1    CH933810    EDW06835.2    GL449507    EFN82628.1    KQ435756    KOX75900.1    CH964291    EDW86528.1    CH940664    EDW62915.1    PYGN01000874    PSN39812.1    GL888730    EGI58245.1    BT127001    AEE61963.1    KQ414658    KOC65650.1    KK852815    KDR15804.1    OUUW01000003    SPP78468.1    GL435030    EFN74149.1    SPP78797.1    KQ767768    OAD53304.1    JXJN01003232    KA644774    AFP59403.1    CH379063    EAL32677.2    CH479204    EDW30543.1    GAKP01017590    JAC41362.1    GDHF01031119    JAI21195.1    EDW00169.1    CH479197    EDW27910.1    NEVH01016959    PNF24846.1    CP012528    ALC49636.1    EDW06834.1    GBYB01012829    JAG82596.1    GDHF01012517    JAI39797.1    GAKP01017595    JAC41357.1    KQ976394    KYM93143.1    PSN39813.1    JRES01001596    KNC21627.1    AE014298    AY113290    AAF45952.2    AAM29295.1    EDW62914.2    KRF80850.1    KRF80851.1    CM000162    EDX02928.1    EDX01203.2    CH963847    EDW72800.1    KQ971354    EFA06000.1    KRF80849.1    GFDG01002533    JAV16266.1    GFDG01002532    JAV16267.1    CH954180    EDV45812.1    GFDG01002534    JAV16265.1    KB631977    ERL87582.1    CH902630    EDV38483.1    KQ434904    KZC11193.1    CM000366    EDX17075.1    GAMC01018162    JAB88393.1    CH379064    EAL31726.3    KQ977636    KYN01149.1    CH964239    EDW82645.1    CH480819    EDW53167.1    EDW82839.1   
Pfam
PF16062   DUF4804        + More
PF01734   Patatin
PF01424   R3H
Interpro
IPR032063   DUF4804        + More
IPR016035   Acyl_Trfase/lysoPLipase       
IPR002641   PNPLA_dom       
IPR036867   R3H_dom_sf       
IPR017330   SPAG7       
IPR001374   R3H_dom       
SUPFAM
SSF52151   SSF52151        + More
SSF82708   SSF82708       
Gene 3D

Ontologies

Topology

Length:
524
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01593
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00086
outside
1  -  524
 
 

Population Genetic Test Statistics

Pi
244.458016
Theta
192.650683
Tajima's D
0.769821
CLR
0.075381
CSRT
0.592770361481926
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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