SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16230
Pre Gene Modal
BGIBMGA013981
Annotation
PREDICTED:_protein_Wnt-2-like_[Bombyx_mori]
Full name
Protein Wnt       + More
Protein Wnt-7b      
Location in the cell
Extracellular   Reliability : 4.256
 

Sequence

CDS
ATGTGTCGGTCTTCTCCATCGGCTATAGCCGCAATCGGTGATGGACTTAAGATGGCATATGAAGAATGCCGGGCTCAATTGAGCGGCCACAGGTGGAACTGCTCAGGAGTGGGAGACGGAAATCACTTCGGGCACGTTATGCCGTTAGCAACGCGTGAGGCGGCTTTTACGTACGCCATCACATCGGCGGGGGTCACCCATGCTTTGAGCATGGCCTGCGCTCGTGGGGAGCTGCCTGGTTGTGGATGTACAGGAAATAAGAGGCGTACGATAAACACAATCGAGCAGTTCCAATGGGGCGGATGCGGTTCCAGTGCGTACGGCGCTAGGTTAGCCCGGCGGTTTTTGGACGCGAGAGAATTGGAACGAGACGGCAGAACCCTCATGAACCTCCACAACAACCGGGTCGGAAGGAAGGTGAGCGAGGTGGTAAAGGACCTAGTTCATCGCGAGTGCAAATGCCACGGCGTCTCGGGCTCCTGCGCTATGAGGACTTGCTGGCGGGCGCTACCGCAGTTCAGGGCTGCGGCTGCCACCCTGCGGGACAAGTATAAGCGAGCGAAGCTAGTTATGCCGCACCCAGCAACGAATCCACAGGACATTAACGTTCGAACACACCTCGTAATAAAACGACAAAAGCACCCAGGTCTCGGTCGACAGCCCAGGAAATCGGAGCTGGTGTTTCTCGAACAGTCACCTTCCTACTGCGAGCCTGATACTGCAGCAGGATCGTTTGGAACTCACGGAAGGATATGCAATAGGACGTCAAGAGGTGAGGACGGCTGCGAGACCCTATGCTGCGGACGCGGGTACAGCACGACCCGCAGCGTTGAGGAGACAAAGTGCCGCTGCCAGTTCCACTGGTGCTGCAACGTCACGTGCAGCAAATGCGTGACGACAGTGGAAACGCACCTTTGTAATTAG
Protein
MCRSSPSAIAAIGDGLKMAYEECRAQLSGHRWNCSGVGDGNHFGHVMPLATREAAFTYAITSAGVTHALSMACARGELPGCGCTGNKRRTINTIEQFQWGGCGSSAYGARLARRFLDARELERDGRTLMNLHNNRVGRKVSEVVKDLVHRECKCHGVSGSCAMRTCWRALPQFRAAAATLRDKYKRAKLVMPHPATNPQDINVRTHLVIKRQKHPGLGRQPRKSELVFLEQSPSYCEPDTAAGSFGTHGRICNRTSRGEDGCETLCCGRGYSTTRSVEETKCRCQFHWCCNVTCSKCVTTVETHLCN

Summary

Description
Ligand for members of the frizzled family of seven transmembrane receptors.
Ligand for members of the frizzled family of seven transmembrane receptors that functions in the canonical Wnt/beta-catenin signaling pathway (PubMed:15923619, PubMed:28803732). Required for normal fusion of the chorion and the allantois during placenta development (PubMed:11543617). Required for central nervous system (CNS) angiogenesis and blood-brain barrier regulation (PubMed:28803732).
Ligand for members of the frizzled family of seven transmembrane receptors that functions in the canonical Wnt/beta-catenin signaling pathway (PubMed:30026314). Required for normal fusion of the chorion and the allantois during placenta development (By similarity). Required for central nervous system (CNS) angiogenesis and blood-brain barrier regulation (PubMed:30026314).
Subunit
Forms a soluble 1:1 complex with AFM; this prevents oligomerization and is required for prolonged biological activity. The complex with AFM may represent the physiological form in body fluids (By similarity). Interacts with FZD1 and FZD10 (PubMed:15923619). Interacts with FZD4 (in vitro) (PubMed:15923619). Interacts with PORCN (PubMed:10866835). Interacts with glypican GPC3 (By similarity). Interacts (via intrinsically disordered linker region) with RECK; interaction with RECK confers ligand selectivity for Wnt7 in brain endothelial cells and allows these cells to selectively respond to Wnt7 (By similarity).
Forms a soluble 1:1 complex with AFM; this prevents oligomerization and is required for prolonged biological activity (PubMed:16227623). The complex with AFM may represent the physiological form in body fluids (PubMed:26902720). Interacts with FZD1 and FZD10. Interacts with FZD4 (in vitro). Interacts with PORCN (By similarity). Interacts with glypican GPC3 (PubMed:16227623). Interacts (via intrinsically disordered linker region) with RECK; interaction with RECK confers ligand selectivity for Wnt7 in brain endothelial cells and allows these cells to selectively respond to Wnt7 (PubMed:30026314).
Similarity
Belongs to the Wnt family.
Keywords
Complete proteome   Developmental protein   Disulfide bond   Extracellular matrix   Glycoprotein   Lipoprotein   Reference proteome   Secreted   Signal   Wnt signaling pathway  
Feature
chain  Protein Wnt
EMBL
BABH01018551    KQ460689    KPJ12754.1    AGBW02008980    OWR51990.1    KQ459166    + More
KPJ03538.1    ODYU01000645    SOQ35763.1    GEZM01023608    JAV88280.1    GEZM01023607    JAV88281.1    GEZM01023611    JAV88276.1    GEZM01023612    JAV88275.1    KQ971354    EFA07553.2    GEDC01020533    JAS16765.1    AAZX01004215    AAZX01005813    GFDL01005051    JAV29994.1    GFDL01005004    JAV30041.1    DS232802    EDS45875.1    RQTK01000562    RUS77655.1    NEDP02076657    OWF36235.1    CH477495    EAT39973.1    GEHC01000851    JAV46794.1    AB167809    BAD12587.1    AB167811    BAD12589.1    GDHF01032883    GDHF01015620    JAI19431.1    JAI36694.1    GAMT01006051    GAMT01006050    GAMT01006049    GAMT01006048    GAMT01006047    GAMT01006046    JAB05812.1    AQIA01006583    AQIA01006584    AQIA01006585    AQIA01006586    GEBF01003593    JAO00040.1    JH172084    EHB13222.1    ADFV01129020    ADFV01129021    ADFV01129022    ADFV01129023    ADFV01129024    ADFV01129025    ADFV01129026    ADFV01129027    ADFV01129028    ADFV01129029    AJFE02039433    AJFE02039434    AJFE02039435    CABD030121578    CABD030121579    CABD030121580    AHZZ02001400    NDHI03003480    PNJ37239.1    AACZ04043605    NBAG03000283    PNI48474.1    BX511035    CR536603    AK289526    BAF82215.1    KB203301    ESO85168.1    AGTP01080758    AGTP01080759    AGTP01080760    AGTP01080761    AGTP01080762    AGTP01080763    AGTP01080764    AGTP01080765    AGTP01080766    AGTP01080767    AAKN02054985    AAKN02054986    PNJ37237.1    JSUE03005760    JSUE03005761    JSUE03005762    AABR07058588    AABR07073335    AC112534    AC115763    BC066003    AAH66003.1    AB197137    BAD83363.1    M89802    BC052018    AQIB01150601    AQIB01150602    ABGA01134833    ABGA01134834    ABGA01220113    ABGA01220114    ABGA01220115    ABGA01220116    ABGA01220117    ABGA01220118    ABGA01220119    ABGA01220120    PNJ37235.1    PNI48470.1    AB062766    AF416743    BC034923    CCAG010005876    CCAG010005877    CCAG010005878    CCAG010005879    CCAG010005880    JH001927    RAZU01000074    EGV98910.1    RLQ75186.1    GL192962    EFB24521.1   
Pfam
PF00110   wnt
Interpro
IPR018161   Wnt_CS        + More
IPR005817   Wnt       
IPR013300   Wnt7       
PDB
6AHY     E-value=7.51534e-61,     Score=591

Ontologies

Topology

Subcellular location
  
Secreted  
Extracellular space  
Extracellular matrix  
Length:
307
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0798199999999999
Exp number, first 60 AAs:
0.02929
Total prob of N-in:
0.02978
outside
1  -  307
 
 

Population Genetic Test Statistics

Pi
212.551584
Theta
153.878494
Tajima's D
1.600066
CLR
0.180158
CSRT
0.809859507024649
Interpretation
Uncertain
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