Gene

KWMTBOMO16222

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740701_[Bombyx_mori]

Location

Bomo_Chr28(+):2174459-2230604      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.201 Mitochondrial   Reliability : 1.859

CDS

ATGGATAAAATCCGTAAGAAGTACGCATCGCTCGGGGACAATGTCGTGGTCGTGAGGCTGGAGCGCTCGCCGAAGGCTGGACTCGGTCTCAGTCTAGCCGGTCACAGGGATAGGAGCAGAATGGCGGTGTTCATCTGTGGGCTTCACCCAGCCGGAGCAGCCGCCAAGGCCACACCCGCTGTTAAAGTTGGAGACGAGATCCTAGAGGTAAACGGAATAGTGCTACATGGGAGATGTCATCTGAACGCGTCAGCCATCATCAAGGGTCTGGTTGGTCCGATATTCAAGATTATATTGTTAAGGAGGAAGTCAGCGTTAGAAGATGTTGCCGTAAAGCCACTCACGCAGTTCCCAGCTGCCCTGGAAGAAGAGTCGGACGATCGCGACCGATTCGCAGGGTACAAGGGGGTCAGAGACATAACAGTGAAAAAGGGTCCAGCGGGGCTGGGCATCATGATAATCGAAGGTCGTCACACGGAGGCTGGCCGTGGGATATTCGTGTCCGATCTTCAAGAGGGAAGCGCTGCTGAGCAGGCGGGACTTCAGATAGGAGACATGCTTCTTGCCGTGAACAGGGATTCCTTATTGAACTGCAGCTACGATTCGGCGGCATCGAAACTGAAACAGGCTGAGGGCGTCGTGATCCTAACGGTCTGCAGTCCCAACATGAAGGATGCGCCGGACAAAGAAGACGGTTCCACTGCCGCCACCACGCCTGGTACTCCAGCCCCTGGTTCTACACCAACATTAGCGAGTGGTCCTTCGAGACCAGCTAGCAGGAACCAAACGCCGGACCCTGGTCTGACCCCTGCCTCCCGCCCTCAAACGCCGAGACCAACGCCATCGCCGGTCAAAGCGGAGCCTCCACCGGAGCCGGCAACAGCGCCAGTGGTTCCCAACCAGGACACGGTTATAGAAATAAATGCGGCCAACGAAGTATTAGGAGTCGTCCTGCTTGGTGGGAGCGACACATTAATTAACGGTCCGGCAGCCGTGATCTTGGACATATATAAAAACGGAGCCATAGACAAAGACGGAAGGCTGGAGGTCGGTGATCTGATAACCGAATGCAACGGAGTCGCCATCACGAAAGAAATGGCACACGAACGAGTCTGTCTTACGATTAAACGAAGAGCTCAGAAAATAAAGCTGACAGTGCACCGGCCGGAGCCGCTGCAGTTCGAGGAGGTGGAGGTGGAGCTGGCGCGGAAGGCGGGGCGCGCCCTCGGGCTCACGTGCGTGCCGGCCGCCCGGGGTGCCGCCCTTTATCTGGGGGAGCTGATACCCGGGTCACCGGCGGACTTGGACGGTCGTCTGCAGAAAGGCGACTTCCTCCAGGCGGTGGACGGGAAGGACCTGTCGTCGGCGGACCTCATGACGGCGGCGGCGACCCTCAAACTGTGCGGGAACAAAGCTGTGATCAAAGTGAAGAGATTTAAAATCGTGAGATAA

Protein

MDKIRKKYASLGDNVVVVRLERSPKAGLGLSLAGHRDRSRMAVFICGLHPAGAAAKATPAVKVGDEILEVNGIVLHGRCHLNASAIIKGLVGPIFKIILLRRKSALEDVAVKPLTQFPAALEEESDDRDRFAGYKGVRDITVKKGPAGLGIMIIEGRHTEAGRGIFVSDLQEGSAAEQAGLQIGDMLLAVNRDSLLNCSYDSAASKLKQAEGVVILTVCSPNMKDAPDKEDGSTAATTPGTPAPGSTPTLASGPSRPASRNQTPDPGLTPASRPQTPRPTPSPVKAEPPPEPATAPVVPNQDTVIEINAANEVLGVVLLGGSDTLINGPAAVILDIYKNGAIDKDGRLEVGDLITECNGVAITKEMAHERVCLTIKRRAQKIKLTVHRPEPLQFEEVEVELARKAGRALGLTCVPAARGAALYLGELIPGSPADLDGRLQKGDFLQAVDGKDLSSADLMTAAATLKLCGNKAVIKVKRFKIVR

Uniprot

A0A0N1IDD6   A0A0N1I6Q9   A0A2A4K6R3   A0A2H1VGE8   A0A1J1HRJ4   A0A0K8SYU1   + More
A0A0A9ZAU0   A0A0A9Z7P0   A0A0A9ZF26   A0A0K8SZT7   A0A146KMQ8   A0A1Y1KEW4   U5EU30   A0A1S4G733   A0A1Q3FV84   A0A1B0EVD3   W5JR76   Q7PTM6   A0A224X4S0   A0A182IQ67   A0A2R5L9X0   J9LZD5   A0A182XWF8   A0A026X181   A0A0P6D2T7   A0A0P5C1K6   A0A0P5C2N8   A0A0P5JSB5   A0A0P5C311   A0A182LQT8   A0A182F6Y9   A0A1B0DQT7   A0A151IBX5   A0A182S5S2   A0A1L8DWC8   A0A1L8DWC4   A0A1L8DWT3   A0A3L8DFN2   A0A182JUU5   A0A182P4I0   A0A158NCF0   A0A182NDT4   A0A182VYH0   Q16ZS8   A0A182MP23   A0A182RN80   A0A2H8TI17   A0A182QJZ7   A0A182XGL0   A0A182HZR7   A0A0C9PHL6   A0A0P5CDR6   A0A0P5C1W7   A0A336LWP9   A0A0F7VK43   A0A182VI20   A0A151JQV0   V5GPH5   A0A2S2P058   A0A182U924  

Pubmed

26354079    25401762    26823975    28004739    17510324    20920257    + More
23761445    12364791    14747013    17210077    25244985    24508170    20966253    30249741    21347285   

EMBL

KQ459166    KPJ03532.1    KQ460731    KPJ12654.1    NWSH01000110    PCG79453.1    + More
ODYU01002437    SOQ39928.1    CVRI01000020    CRK90696.1    GBRD01007378    JAG58443.1    GBHO01003136    JAG40468.1    GBHO01003130    JAG40474.1    GBHO01003134    JAG40470.1    GBRD01007376    JAG58445.1    GDHC01021853    JAP96775.1    GEZM01086681    GEZM01086680    JAV59068.1    GANO01004074    JAB55797.1    GFDL01003580    JAV31465.1    AJWK01020116    ADMH02000575    ETN65813.1    AAAB01008799    EAA03655.6    GFTR01008919    JAW07507.1    GGLE01002153    MBY06279.1    ABLF02020507    KK107034    EZA62060.1    GDIQ01084722    JAN10015.1    GDIP01176858    JAJ46544.1    GDIP01176862    JAJ46540.1    GDIQ01199436    JAK52289.1    GDIP01176861    JAJ46541.1    AJVK01008731    AJVK01008732    KQ978076    KYM97224.1    GFDF01003350    JAV10734.1    GFDF01003348    JAV10736.1    GFDF01003349    JAV10735.1    QOIP01000008    RLU19275.1    ADTU01011857    ADTU01011858    ADTU01011859    ADTU01011860    ADTU01011861    ADTU01011862    ADTU01011863    ADTU01011864    ADTU01011865    ADTU01011866    CH477484    EAT40193.1    AXCM01001587    GFXV01001960    MBW13765.1    AXCN02002400    APCN01002005    GBYB01000348    GBYB01000351    JAG70115.1    JAG70118.1    GDIP01176860    JAJ46542.1    GDIP01176859    JAJ46543.1    UFQT01000171    SSX21083.1    LN830676    CFW94185.1    KQ978619    KYN29769.1    GALX01002452    JAB66014.1    GGMR01010230    MBY22849.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000183832    UP000092461    UP000000673    + More
UP000007062    UP000075880    UP000007819    UP000076408    UP000053097    UP000075882    UP000069272    UP000092462    UP000078542    UP000075901    UP000279307    UP000075881    UP000075885    UP000005205    UP000075884    UP000075920    UP000008820    UP000075883    UP000075900    UP000075886    UP000076407    UP000075840    UP000075903    UP000078492    UP000075902   

Pfam

PF00595   PDZ

Interpro

IPR036034   PDZ_sf        + More
IPR001478   PDZ       
IPR004172   L27_dom       
IPR036892   L27_dom_sf       

SUPFAM

SSF50156   SSF50156        + More
SSF101288   SSF101288       

ProteinModelPortal

A0A0N1IDD6   A0A0N1I6Q9   A0A2A4K6R3   A0A2H1VGE8   A0A1J1HRJ4   A0A0K8SYU1   + More
A0A0A9ZAU0   A0A0A9Z7P0   A0A0A9ZF26   A0A0K8SZT7   A0A146KMQ8   A0A1Y1KEW4   U5EU30   A0A1S4G733   A0A1Q3FV84   A0A1B0EVD3   W5JR76   Q7PTM6   A0A224X4S0   A0A182IQ67   A0A2R5L9X0   J9LZD5   A0A182XWF8   A0A026X181   A0A0P6D2T7   A0A0P5C1K6   A0A0P5C2N8   A0A0P5JSB5   A0A0P5C311   A0A182LQT8   A0A182F6Y9   A0A1B0DQT7   A0A151IBX5   A0A182S5S2   A0A1L8DWC8   A0A1L8DWC4   A0A1L8DWT3   A0A3L8DFN2   A0A182JUU5   A0A182P4I0   A0A158NCF0   A0A182NDT4   A0A182VYH0   Q16ZS8   A0A182MP23   A0A182RN80   A0A2H8TI17   A0A182QJZ7   A0A182XGL0   A0A182HZR7   A0A0C9PHL6   A0A0P5CDR6   A0A0P5C1W7   A0A336LWP9   A0A0F7VK43   A0A182VI20   A0A151JQV0   V5GPH5   A0A2S2P058   A0A182U924  

PDB

6IRD     E-value=2.40704e-24,     Score=279

KEGG

101740701    K06095 multiple PDZ domain protein | (RefSeq) uncharacterized LOC101740701

PATHWAY

04391    Hippo signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0005515   GO:0005634   GO:0006396   GO:0030529   GO:0008233   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

483

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.61627

Exp number, first 60 AAs:

0.1389

Total prob of N-in:

0.07717

outside

1  -  483

 

 

Pi

222.857096

Theta

165.116612

Tajima's D

0.476718

CLR

0.62312

CSRT

0.506174691265437

Interpretation

Uncertain