Gene

KWMTBOMO16214

Pre Gene Modal

BGIBMGA013915

Annotation

cuticular_protein_RR-2_motif_133_precursor_[Bombyx_mori]

Location

Bomo_Chr28(-):2008722-2011083      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.375 Extracellular   Reliability : 2.03

CDS

ATGTTCGTTAAACAATACAATAAAGACTTCGACCGACATTCTTTAGACTTCATTTATTTATTTTTATTGGTGGTAGGACGTCTTGCACATCCGAAATATTCTTTCGATTATTCCGTAAAAGATCCTCACACTGGCGACGAGAAAGAGCACTGGGAGACTAGAGACGGTGACAAGGTTAAAGGAACCTACACCCTGGTCGAGACAGATGGCACAAAACGCGTTGTCGAATATGAAGCCGACGATAAGAACGGCTTCAATGCCGTCGTGCACAAGATAGGCACGCCTAAGCACGAGGAGTACCACGCCAAGCCAGCCCACGAGCCGGTCCAATACCAGCACGACTACGGACATTTCGACGAGGGTTACGCTCCGATATCGGCCAGTTTCGAACACTAA

Protein

MFVKQYNKDFDRHSLDFIYLFLLVVGRLAHPKYSFDYSVKDPHTGDEKEHWETRDGDKVKGTYTLVETDGTKRVVEYEADDKNGFNAVVHKIGTPKHEEYHAKPAHEPVQYQHDYGHFDEGYAPISASFEH

Uniprot

C0H6X5   A0A2H1W781   I4DQE0   A0A0N0P9S3   A0A3S2NYM5   A0A212FDJ4   + More
A0A1Y1MDV4   W8CBA4   A0A3S2NYR7   A0A067QYH3   A0A1J1IZ09   A0A1A9WG96   A0A1I8MPY2   A0A1B6FYY6   A0A034WF53   T1PJE4   Q16PW8   A0A1I8QEP8   A0A0A1WPK8   A0A0A1X6U2   A0A336L7W5   A0A2H1W1A5   A0A1I8N580   A7URX9  

Pubmed

19121390    19280704    22651552    26354079    22118469    28004739    + More
24495485    24845553    25315136    25348373    17510324    25830018    12364791    14747013    17210077   

EMBL

BABH01018489    BR000634    FAA00636.1    ODYU01006467    SOQ48334.1    AK404066    + More
BAM20130.1    KQ459166    KPJ03528.1    RSAL01000022    RVE52335.1    AGBW02009063    OWR51768.1    GEZM01037574    JAV82036.1    GAMC01000639    JAC05917.1    RSAL01000021    RVE52458.1    KK852877    KDR14523.1    CVRI01000064    CRL05515.1    GECZ01014379    JAS55390.1    GAKP01006539    JAC52413.1    KA648033    AFP62662.1    CH477770    EAT36402.1    GBXI01013520    JAD00772.1    GBXI01007827    JAD06465.1    UFQS01002289    UFQT01002289    SSX13690.1    SSX33116.1    ODYU01005723    SOQ46859.1    AAAB01008807    EDO64772.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000007151    UP000027135    UP000183832    + More
UP000091820    UP000095301    UP000008820    UP000095300    UP000007062   

PRIDE

C0H6X5   

Pfam

PF00379   Chitin_bind_4

Interpro

IPR000618   Insect_cuticle        + More
IPR031311   CHIT_BIND_RR_consensus       

ProteinModelPortal

C0H6X5   A0A2H1W781   I4DQE0   A0A0N0P9S3   A0A3S2NYM5   A0A212FDJ4   + More
A0A1Y1MDV4   W8CBA4   A0A3S2NYR7   A0A067QYH3   A0A1J1IZ09   A0A1A9WG96   A0A1I8MPY2   A0A1B6FYY6   A0A034WF53   T1PJE4   Q16PW8   A0A1I8QEP8   A0A0A1WPK8   A0A0A1X6U2   A0A336L7W5   A0A2H1W1A5   A0A1I8N580   A7URX9  

KEGG

100379346    no KO assigned | (RefSeq) CPR133, BmorCPR133; cuticular protein RR-2 motif 133

GO

GO:0042302   GO:0031012   GO:0005634   GO:0006396   GO:0030529   GO:0008233   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

131

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.65123

Exp number, first 60 AAs:

3.65123

Total prob of N-in:

0.37743

outside

1  -  131

 

 

Pi

163.939929

Theta

134.63618

Tajima's D

0.683788

CLR

0.595981

CSRT

0.567821608919554

Interpretation

Uncertain