SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16213
Pre Gene Modal
BGIBMGA013976
Annotation
PREDICTED:_homer_protein_homolog_2_isoform_X1_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.037
 

Sequence

CDS
ATGACCTTTACGAAGACATCCCAGAAGTTCGGGCAGTGGAGTGACGTCAGAGCGAACACTGTCTACGGTCTCGGCTTCGCTTCCGAAGCCGAACTCGGAAAGTTTATCGAGAAGTTTCAAGAGGTGAAGGAAGCTATTCAGGCCCAGCAGTGCGGCGTCGCGGGTAAAGGCGTGAACGGCAACAGCGGGGCCGCCACGCCCGTCGCCAGCGCCACCGCCAGCCCGCTGCTCGCCGCCCGCCCCGCGCCCGACGACCAGCCCCCGGCCGTGGTAAGTCCGCGCGCCGCCCCCTGCGTGGGGGACCGGCTGTGA
Protein
MTFTKTSQKFGQWSDVRANTVYGLGFASEAELGKFIEKFQEVKEAIQAQQCGVAGKGVNGNSGAATPVASATASPLLAARPAPDDQPPAVVSPRAAPCVGDRL

Summary

Uniprot
ProteinModelPortal
PDB
1DDV     E-value=1.47311e-15,     Score=195

Ontologies

GO

Topology

Length:
103
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03712
Exp number, first 60 AAs:
0.00766
Total prob of N-in:
0.45059
outside
1  -  103
 
 

Population Genetic Test Statistics

Pi
194.60051
Theta
183.589656
Tajima's D
0.980491
CLR
0.422364
CSRT
0.650817459127044
Interpretation
Uncertain
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