Gene
KWMTBOMO16209 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013974
Annotation
PREDICTED:_protein_lingerer_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.816
Sequence
CDS
ATGAGTTTGGGAGCGCGCGCCACCAAGTGTGGTGCGAAAGGCAAGGAGGGCAAACACGCCGCCGACAAGGGCAAGGGCGCAGATAGACCACAGCCCAAGGAGAAGGCCAAACCGCAGGCGACTACAGAACAACTCCGAATGGCACATATGATCGACCGTAAAAGCGACGACTCGTCCGAGGTTCGACGAATGGTCCTGGAGTTAATGGAGATGACCTGTAGGACTGAAGATGAGGTTTGCTCCGCCCTACATGACACAGACAACGACCTCGACGCCGCCTGCAACCTGCTACTTGAAGAAAGTCAACGGATACAGGGCGAATGGCAAACCAGAGAGAAGAAAAAGAAGAAACCTCCCGCCCCCGCCGGAAACGGCGAGGTCGAGCCGCGCGACCCGCGGAGCCGCTCCGGACCGAGATCACGTCGCGGGGACACGGAGCGTCCGGAGCGCGGCGAGGGCTCGTGGCGGGGTCGCGGCGGGGGGGGGGGGAGGGGAGCCGCCCGGGGAGCGCGGGGGGGCGCGCGGGGCGGCAGGGGCAGACCTCGGGGGGCAAGAGAGCACGACTACACGCCCCTCGACAGCGGATCCTCTCCACAAGATCCAAATGCAGGAGATTCGTTCCCTGCAACGGAAGACTGGGACAACGAGGAGTGGTCAGGATCTCTGTCCGATACCAAGGTGTTCATCGCGAGCTCCAGCGCGCAGCTAGCCGCGTCCGACGCCGCGCCCGCCGCCCGCAGCGAAGACTGGGACACCCCGGAAACGCCTAATGGCCCAACCGAAGGCCACATTCCCACTTACACATACCACAATCCACATCACCACAACATTATCGAGCAAGCGACGGTGAACGCGGGCAGTCGGCAGTCCCCGGTAGCGGAGCCCCCGGAGCCCTACATACATCAGCACACGCACCAGCCGATGGGCATGTCGGGGAGCCTGTCAGCCGCGCAGACGCAGTACCTCACGCAGCTCACCCAGCAGTCGCAGAGACATGACAATAGTGTATACACTTCAAATTATGGTGTTTACGGGTCCACGGACATCAGTGCTCAAAGGAAACCGCAGAGGGCGCGAGTCCCGCCACCTTCTAAGATACCGTCATCAGCCGTCGAGATGCCGGGAGGGGAGAGCCCCGGAATGTTCCTAGACGTGCAGTTTGGCGCTCTAGAACCTGACACGTTACACGACACCACGCCCACCAGCAAACCGCCGAACGCGACGCCCGAGCAGCCCGCCCCCGCGCCCCCCGCGCCCGAGCCCGCCGACCCGCCCGCCGCGCCCCCCGCGCAACTAGTGAGTACCTCCCACTCCTACTGTGTCCACGTGGCAGGCTTCGTTTTGAATACATCAGTACAGTTGCCGCCAATAAAATGTTACAATTTAGAGTATACAATAAATAAATTCCATGAAGGAAATTATAACGAGTAA
Protein
MSLGARATKCGAKGKEGKHAADKGKGADRPQPKEKAKPQATTEQLRMAHMIDRKSDDSSEVRRMVLELMEMTCRTEDEVCSALHDTDNDLDAACNLLLEESQRIQGEWQTREKKKKKPPAPAGNGEVEPRDPRSRSGPRSRRGDTERPERGEGSWRGRGGGGGRGAARGARGGARGGRGRPRGAREHDYTPLDSGSSPQDPNAGDSFPATEDWDNEEWSGSLSDTKVFIASSSAQLAASDAAPAARSEDWDTPETPNGPTEGHIPTYTYHNPHHHNIIEQATVNAGSRQSPVAEPPEPYIHQHTHQPMGMSGSLSAAQTQYLTQLTQQSQRHDNSVYTSNYGVYGSTDISAQRKPQRARVPPPSKIPSSAVEMPGGESPGMFLDVQFGALEPDTLHDTTPTSKPPNATPEQPAPAPPAPEPADPPAAPPAQLVSTSHSYCVHVAGFVLNTSVQLPPIKCYNLEYTINKFHEGNYNE
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF12478 DUF3697
SUPFAM
SSF46934
SSF46934
ProteinModelPortal
PDB
1WJ7
E-value=0.00375972,
Score=96
Ontologies
GO
Topology
Length:
476
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00413
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00634
outside
1 - 476
Population Genetic Test Statistics
Pi
278.308513
Theta
175.590623
Tajima's D
1.509186
CLR
0.707877
CSRT
0.789810509474526
Interpretation
Uncertain
