SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16208
Pre Gene Modal
BGIBMGA013917
Annotation
PREDICTED:_TIMELESS-interacting_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.092
 

Sequence

CDS
ATGATTTCTAACCTCAACGTATATGTGTTCCTTCAAGATGAAGCTAATGAGGCTCGGGAATTGGAGCGGGTAATCGACGGTGACGAGTTTGACGACGATCAACGGGCATCATCACCAGATAGTGATGATAATAGCGCTAAAGGAGACGAAGCCGAGGAGGATACTAGACGTGTAGATCCACAAGCCAAAACAAAACGTGTTGTAAGGAATCCAAGGTTCATACTGAACCCCGCTCGTCTGACAGGGCCAAGAGGAATACAAGTTATACCTGAGCATTTCAAAGATTTTAAATTTAGAGGTAAAGGTCACGAAAAAGAAGATTTAGATTTAATACTCAAAAAACTAGAGCATTGGGCATATAGATTGTATCCTAAATTTGAATTTGAAGACTGTTTAAAGAAAATAGAATCACTCGGCAAAAAGAGACCTGTAATGGTACATCTATGCAAAATTCGTACAGATCAGATTACATCAGAAGAAACAGTGGTACAGAGGGATTCCAGTGAAGATGAGGCACCACCACAAGAAGAAGACGAATTTGACAAATTACTGCAAGAGCAAATTGCACTGGCCAGGTCCACGCCGGCTCCTGAATCTGTAAAAAAAGTTCGAGACAAGCCAATGAACATATCTCAAATACTACCAAAAGCAACATCGTCTCCTTCTATAAACGAAGAACAACGAGAAAGGATGCTTAGAAATAGGCAATTGGCTGAAGAACGGCGTTTGGCTAAGCTCAAACAAAATGTCAATGTTGAACAAAAGCGAATTAATAATGATAATTTAGAAACAAACAAACAGATTGATGATATAAACAAAGTAAACAATGAAGAACAAACACTACAAAATGGGGAAACACGATATAGCGATGGAATTGAACACAATGGTGCAGTAGATAATTCATTACACATAAATAAAAGTTTGATAGAAAATCAAACTGTCAATAATGATAATCATAATCTAAAAGAAGCTCTTAACATAACTAAAGTACTTGAGCTTCAAACTAAAAATAGCTCTCAGGAAAAACCTATGGAAATTCATAATACTGAAAAGGATACAACAGAAACAATTGAAAATATTGAATTATGTGTGCCAAATGATTTGATTGAAGCCAATATAAACCAACGAACCGAAAAAGTTACAACATCTATTAATGATAATACACAAATTGATGAAATAAATAATATGGATGAAGTTGACAAAGAAAATAATTTAGATATTTTAGTAGATGACTTACGTAACAATGAAACCAATGTTAGTAAAATAATAGATCACAGTAAAGAGACAGAAGTAATTGACCCCTTATTTATTAATGATTACGCAATGGAGATTAATTTTAGTGATGAGGATTTCTAA
Protein
MISNLNVYVFLQDEANEARELERVIDGDEFDDDQRASSPDSDDNSAKGDEAEEDTRRVDPQAKTKRVVRNPRFILNPARLTGPRGIQVIPEHFKDFKFRGKGHEKEDLDLILKKLEHWAYRLYPKFEFEDCLKKIESLGKKRPVMVHLCKIRTDQITSEETVVQRDSSEDEAPPQEEDEFDKLLQEQIALARSTPAPESVKKVRDKPMNISQILPKATSSPSINEEQRERMLRNRQLAEERRLAKLKQNVNVEQKRINNDNLETNKQIDDINKVNNEEQTLQNGETRYSDGIEHNGAVDNSLHINKSLIENQTVNNDNHNLKEALNITKVLELQTKNSSQEKPMEIHNTEKDTTETIENIELCVPNDLIEANINQRTEKVTTSINDNTQIDEINNMDEVDKENNLDILVDDLRNNETNVSKIIDHSKETEVIDPLFINDYAMEINFSDEDF

Summary

Pfam
PF07962   Swi3
Interpro
IPR040038   TIPIN/Csm3/Swi3        + More
IPR012923   Csm3       

Ontologies

Topology

Length:
451
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00230
outside
1  -  451
 
 

Population Genetic Test Statistics

Pi
202.6489
Theta
190.912044
Tajima's D
0.850669
CLR
0.058682
CSRT
0.616869156542173
Interpretation
Uncertain
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