Gene

KWMTBOMO16207  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013972

Annotation

PREDICTED:_homocysteine-responsive_endoplasmic_reticulum-resident_ubiquitin-like_domain_member_2_protein_[Amyelois_transitella]

Location

Bomo_Chr28(+):1820494-1828648      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.938

CDS

ATGATACCAGATAACGTTACCTTGATTGTAAAGGCACCTAATCAGCAGGTCGAGGATCAAAACATAGAATGCAGATCGTCGTGGACCGTGAAACAGCTAAAAGGACATCTATCCGAAGTGTATCCAAGCAAACCGAGAACAGATGATCAAAAAATTATATACTCTGGTCAACTTTTAGACGACAACACAATACTGAAAGATGTTCTCCGAACTTATGAAACCACTATCGCTCATACCATGCATCTAGTTTGTACACCAACCAGGAAAATGGCTAGCCCGTTACCCCAAGACAAGGTCGAAGTGGAGCCAACTGAAGGACTCAGGCACCGGAATGTACCAGAACCAACAAGACCGGTGGAAGCCAGACCGGAAACAAGGCAGAATGATCAAAACCACACAGTTGAAATGCAGAACTATCTGACCTCTTTGACAAATAATTATGGACGGCCTAATTTCATGAATTACAATATGGCAGATGGACAGATTCCGGGTGATGTCACTTCCCAAGTTAATCAGATGATGATGATGCAACAAGCTTATTTGGAGTATCTTAGGCAGTACACTAACATGCTACAGTCGTACAACGACACCCAGCCCCACGCCCCGGCTCCGGAGACGCCCGGGCCGGCGGAGCAGGCGCCTCCCCCGGCGGAGGAGGAGGGGGGCGCCGTGGGCCGCGACTGGCTCGACCACCTGTACGCCGGCTCGCGGCTCGCGATACTGTTCTCGCTCGTGTACCTGTACGGGAGCCCGGCGCGGCTGCTGCTGGTTGCGCTGCTCGTCACCGCCGGCTATCTTCACCAAATCGGCTTCTTCCGCGAACTACAACTGAACCCTGGCGGCAACCAACCTGCCAACGACCGGCCGGAGGAAGCGGACCGCCCCCCCCGGCCGGCCGACGCGGACCGACGCGAGCCGACGGCCGACGACAACCGACAACACGAGCCGACGACCGACGACAACAGACAACAGGAGCGTTCGGCCGACGACGACCGGCGGGCGCGGGGGACCGACCAGTCGTTGCTGGCGGCCGCGCGCGTCATCGTGATGTCGTTCTTCGCTTCGTTAATACCGGACGTGAATTATTAG

Protein

MIPDNVTLIVKAPNQQVEDQNIECRSSWTVKQLKGHLSEVYPSKPRTDDQKIIYSGQLLDDNTILKDVLRTYETTIAHTMHLVCTPTRKMASPLPQDKVEVEPTEGLRHRNVPEPTRPVEARPETRQNDQNHTVEMQNYLTSLTNNYGRPNFMNYNMADGQIPGDVTSQVNQMMMMQQAYLEYLRQYTNMLQSYNDTQPHAPAPETPGPAEQAPPPAEEEGGAVGRDWLDHLYAGSRLAILFSLVYLYGSPARLLLVALLVTAGYLHQIGFFRELQLNPGGNQPANDRPEEADRPPRPADADRREPTADDNRQHEPTTDDNRQQERSADDDRRARGTDQSLLAAARVIVMSFFASLIPDVNY

Uniprot

A0A2A4JMQ0   A0A212EPE2   A0A194RBE5   A0A194PZ68   A0A0L7L3Y2   A0A2W1BJU4   + More
A0A2J7PZQ2   A0A1L8DTR1   A0A1L8DU04   A0A1L8DTV4   A0A1L8DTS6   A0A1Y1MVE5   A0A1B6D3D0   A0A1B6IEL0   A0A067QTA3   N6T324   D6WT38   E0VQM0   A0A1W4WFN9   V5GM57   F4WUA8   A0A151J859   A0A158NTX7   A0A195C9L7   A0A151WX06   A0A195FJ93   A0A3Q4HMX1   I3KUI5   A0A0A9VZJ2   A0A3B4G3T5   A0A3Q2W002   A0A3P8P956   A0A3P9DM16   E2BIL4   A0A087TD61   A0A0M9A224   A0A3Q1GDG4   A0A1W7RAE0   H2S4T1   J9K193   A0A3Q1BYY3   A0A3P8SM90   A0A3Q3J2X8   A0A2D0SF47   A0A2D0SF49   A0A3P8W995   A0A3P8SL40  

Pubmed

22118469    26354079    26227816    28756777    28004739    24845553    + More
23537049    18362917    19820115    20566863    21719571    21347285    25186727    25401762    26823975    20798317    21551351    24487278   

EMBL

NWSH01001035    PCG72998.1    AGBW02013479    OWR43362.1    KQ460416    KPJ14937.1    + More
KQ459583    KPI98627.1    JTDY01003092    KOB70162.1    KZ150238    PZC71943.1    NEVH01020333    PNF21817.1    GFDF01004222    JAV09862.1    GFDF01004220    JAV09864.1    GFDF01004223    JAV09861.1    GFDF01004221    JAV09863.1    GEZM01021134    GEZM01021133    JAV89128.1    GEDC01017111    JAS20187.1    GECU01022341    JAS85365.1    KK852981    KDR12951.1    APGK01045777    APGK01045778    APGK01045779    KB741039    KB632367    ENN74519.1    ERL93665.1    KQ971354    EFA07163.1    DS235430    EEB15676.1    GALX01003277    JAB65189.1    GL888355    EGI62216.1    KQ979585    KYN20634.1    ADTU01026191    KQ978143    KYM96808.1    KQ982675    KYQ52423.1    KQ981522    KYN40730.1    AERX01028400    GBHO01042575    GBRD01015595    GDHC01014695    JAG01029.1    JAG50231.1    JAQ03934.1    GL448516    EFN84461.1    KK114668    KFM63050.1    KQ435791    KOX74353.1    GFAH01000284    JAV48105.1    ABLF02031928   

Proteomes

UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    UP000235965    + More
UP000027135    UP000019118    UP000030742    UP000007266    UP000009046    UP000192223    UP000007755    UP000078492    UP000005205    UP000078542    UP000075809    UP000078541    UP000261580    UP000005207    UP000261460    UP000264840    UP000265100    UP000265160    UP000008237    UP000054359    UP000053105    UP000257200    UP000005226    UP000007819    UP000257160    UP000265080    UP000261600    UP000221080    UP000265120   

Pfam

PF00240   ubiquitin

Interpro

IPR000626   Ubiquitin_dom        + More
IPR029071   Ubiquitin-like_domsf       
IPR039751   HERPUD1/2       
IPR001721   TD_ACT-like       
IPR016024   ARM-type_fold       

SUPFAM

SSF54236   SSF54236        + More
SSF48371   SSF48371       

ProteinModelPortal

A0A2A4JMQ0   A0A212EPE2   A0A194RBE5   A0A194PZ68   A0A0L7L3Y2   A0A2W1BJU4   + More
A0A2J7PZQ2   A0A1L8DTR1   A0A1L8DU04   A0A1L8DTV4   A0A1L8DTS6   A0A1Y1MVE5   A0A1B6D3D0   A0A1B6IEL0   A0A067QTA3   N6T324   D6WT38   E0VQM0   A0A1W4WFN9   V5GM57   F4WUA8   A0A151J859   A0A158NTX7   A0A195C9L7   A0A151WX06   A0A195FJ93   A0A3Q4HMX1   I3KUI5   A0A0A9VZJ2   A0A3B4G3T5   A0A3Q2W002   A0A3P8P956   A0A3P9DM16   E2BIL4   A0A087TD61   A0A0M9A224   A0A3Q1GDG4   A0A1W7RAE0   H2S4T1   J9K193   A0A3Q1BYY3   A0A3P8SM90   A0A3Q3J2X8   A0A2D0SF47   A0A2D0SF49   A0A3P8W995   A0A3P8SL40  

PDB

2KDB     E-value=1.5288e-17,     Score=219

KEGG

101740432    no KO assigned | (RefSeq) homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like doma

GO

GO:0016021   GO:0030968   GO:0005515   GO:0015074   GO:0008270   GO:0016592   GO:0008233   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR12943  

Length:

362

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

30.60837

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08998

outside

1  -  362

 

 

Pi

271.293556

Theta

182.781961

Tajima's D

1.783692

CLR

0.043868

CSRT

0.842757862106895

Interpretation

Uncertain