Gene
KWMTBOMO16205
Pre Gene Modal
BGIBMGA013918
Annotation
PREDICTED:_uncharacterized_protein_LOC101744914_[Bombyx_mori]
Full name
Mediator of RNA polymerase II transcription subunit 20
Alternative Name
Mediator complex subunit 20
Location in the cell
Extracellular Reliability : 1.407 PlasmaMembrane Reliability : 1.306
Sequence
CDS
ATGGGGGTAACAGTCTTACAGCAATATCCAGTGCCAGAGAACAAGACCGGAACATATGTAGTGGAGTTACTTACAAAGCGTATCTTAGCATTAGGGGCGACACAACAAGGACAGTTCCTGGTTGATTGCGAGAGTTATTTATCACATCCACTCATGGGTACAACAAAAACAGTACATATATTACACAACTCTGAGCAGCCTGCGTCTGTCTTCTCAATCCTTGAAAGTGGCACGAAAAATATTCACGTCATAGCTGACGGACTATTTGACTTGTTAATGATGAAGTTGTCTCAGCATTATACTTCTAAGAAACAAACCAAAATCGAGAGCAAAGGACCTAGGTTTGAGCTCGGAGATTTCTGTGTGAAGCTCGGATCAGTTACTATGAATCAGAATTTTAAAGGGATTTTGATTGAGGTAGAATACAGACCATGCGTAATGGCTAATGCGGTCTGGGGTCTGCTTCGAGAGTTCCTTCAAGGATTGTTAGGGCCAACTGTTCCGGTCCAACCTCCTCAGCATCTAATAAGCAGAATGAACGAAATATACACTCCAATAGACACAATATATCAGTATTTAGAACATTTCATGCCTCTATTAAACAGTGTGCAGTTAGATTTAATTAATTGCGGCGTGGACCACGATCTCGAAGTTTCTACGGGTAACATTGAACTACAAAAATATCCCTGGAGCGGTATTTTGTATTACATTTACAATGGCGAAGACGGAGAGACCCGTGCTGTAACTATGGTGGTCCTAATTCAAAAGGAGTTTGTGCTCGGTTCTGCGGCTGATATAGGACCTATATCGAACCGTGATTTTAGGGAGTACTCTAGGGTCTTGCTAGGTGAGAACTGGATAGCTCCAGGACGCCGCGTCCGAAACTACGTGCTCCATCCCGAGTATGGCGACACTTACAACACGTTAGCTTTGGTTCAACTTAAAGACATCGTCCGAGACGCGAACATACGACCTGTTTGTCCACCGCCAGAGAGACTGAGGAATCCAACTTTTTACGTCGTCAAATTTGAAAATGATTACACAAATCTCGAAAAGAAGATGATTCAAGTCGAACACATACCAGGGAATTGGTGCAAAGAGTTTTATGTCAAAGCTAACTTGTATAGCCTGAAGATGCGTCCACCACACGTGGCCTGTGTCGTTTCGTTGGACGATAAATATCCTTGTGTTTGGAACGCTGGTTCAGCCTTAGTCTCTAGAGACGTTTGGGGGAGATGGCAGTTGTTAGGCCTAGGAGTAAGAGGACCAGGGTGCGGTGCGCCATCCAGGTTTCTGGATATCATGAGCTATGACCCTTGGATACGGTCCAGCCTCGCCAAGTTCCAGCGCATCACAATTTCGGAGATAACCCGACAGAAATATGTATTGCGTAGCGACGGCGGCACGGCCTACCAGAGATTCGGGGACTGTGATGAGGAGGAAACCCACAACCTCATATTCCGAGAGGTCATCGTCCTGAGAACGGACAATAACCAATACCAATTCCTGACTTATAACTTGACACTGATGAACAACGTCAACTATAGATGTCTGACACTCGAGCTGGTAAACGCGTCCGGAACTTCAGAGATGAGGGTCACCCACCACTCCCGCAGGTACACGCACGGACCCGCGTGCTACACTTATAGAGGGACCATATTCGATATATCAGTATACATAATGTTCTCGGACAAGTGCGTCTTCCAAATGTATATATGGGGCGACGAACAAAACATGGTTCTGCTCGACAAACAAAAGTGGAAATGGGAGGAGGGCACCTATTACGAAGACTTCACTATGAGCCGCGTCGAATACAGGGGTCAGACTTACATGACCGATTTCGGTTACGAGCCCTTGGACTACAAGATGTGGATACCGGAATACGATGTTTGGACTACGACAGAGTTCGATAACAGTAGCTGGTCGAGCACAACGCCGCCTCCCTCCAAGGAATCCGGAGGCGCACAATTCGCACAGATGGTCGAGTACCGTCCCACCGTCGGTTCGACTACCACGACTAGGACGAAAAAGAAGTTTAAAAGGAAAACGACAACCACCAAACCGACTACCAAGCCACCAACCAACTCGACCTTACCAGCAACCAACTCGACCTTGCCAGCAACCAACTCGACCACACCAGCAACGAACTCGACCTCACCGAAAAAACCATGA
Protein
MGVTVLQQYPVPENKTGTYVVELLTKRILALGATQQGQFLVDCESYLSHPLMGTTKTVHILHNSEQPASVFSILESGTKNIHVIADGLFDLLMMKLSQHYTSKKQTKIESKGPRFELGDFCVKLGSVTMNQNFKGILIEVEYRPCVMANAVWGLLREFLQGLLGPTVPVQPPQHLISRMNEIYTPIDTIYQYLEHFMPLLNSVQLDLINCGVDHDLEVSTGNIELQKYPWSGILYYIYNGEDGETRAVTMVVLIQKEFVLGSAADIGPISNRDFREYSRVLLGENWIAPGRRVRNYVLHPEYGDTYNTLALVQLKDIVRDANIRPVCPPPERLRNPTFYVVKFENDYTNLEKKMIQVEHIPGNWCKEFYVKANLYSLKMRPPHVACVVSLDDKYPCVWNAGSALVSRDVWGRWQLLGLGVRGPGCGAPSRFLDIMSYDPWIRSSLAKFQRITISEITRQKYVLRSDGGTAYQRFGDCDEEETHNLIFREVIVLRTDNNQYQFLTYNLTLMNNVNYRCLTLELVNASGTSEMRVTHHSRRYTHGPACYTYRGTIFDISVYIMFSDKCVFQMYIWGDEQNMVLLDKQKWKWEEGTYYEDFTMSRVEYRGQTYMTDFGYEPLDYKMWIPEYDVWTTTEFDNSSWSSTTPPPSKESGGAQFAQMVEYRPTVGSTTTTRTKKKFKRKTTTTKPTTKPPTNSTLPATNSTLPATNSTTPATNSTSPKKP
Summary
Description
Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
Subunit
Component of the Mediator complex.
Similarity
Belongs to the Mediator complex subunit 20 family.
Uniprot
Pubmed
Proteomes
Pfam
PF08612 Med20
SUPFAM
SSF50494
SSF50494
ProteinModelPortal
Ontologies
GO
PANTHER
Topology
Subcellular location
Nucleus
Length:
723
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02315
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.00033
outside
1 - 723
Population Genetic Test Statistics
Pi
256.337186
Theta
177.401797
Tajima's D
1.126996
CLR
0.271925
CSRT
0.694515274236288
Interpretation
Uncertain
