SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16204  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013971
Annotation
hypothetical_protein_RR48_08914_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 3.381
 

Sequence

CDS
ATGGCAGACGACTTCAAAACGTTGACCGGCGTGTCTCCTCTCATCACCAACGAGAGACTGAACGAATCTCTAACCAAATGGTTCGGTGAGGAAACAACCTTCACCCATTGGGAGTATGTCGGCGACACCGGCAAGGGTGATTCCTACCTCAGCGAGTTGATTCGCATCAAAATCTACGGCCTGAATTCAAACAAAGAGTCGAAGCACGTCCAGTGCGTATTAAAGAGCATCCCAAAAAACGTATCTAGGCGCTTGACGTTCCGCAGCAATGAGTTCTTCTATAACGAGATCAGTTTCTACGAGAAAGTCTTACCTGAACTATCAAAGTTCCGAGCCTCAAAAAGCGCCAATGAACCGTTCGACAAATGCCCGAAATTGTTATTCTCATACGTCGACGGGGTCCATGACGTCATTTGTTTGGAAGACGAATCGATATATGATTACGGCGGTGCCGTCAGACAGGAAGGTATAGATTATGACCACGCGAAATTGTCGTTCAAGGTCTTAGCGCGATTCCACGCTATATCGTTCGCAATGAAAGACCAAAAACCGGATGAGTTCGAGAGGATTCGTAAAGAATTGCTAGAGACGTACTACCACGAACGCCTGTGGGACTGGTATTCGAAGTTTTGGGATCGGCTTCGGTTCATTGCGATAGACGCTGTCGAAAAGGAATATCCTAACTCGATATACTCGGAGAAGGTCAAGGAATTCGCCGTACCGGAAATATACAAGAAGATGGTAGATGCCGCCACGAATACTCTTGATACCGGCGTCATATCTCACGGGGATTGCTGGACGAATAATTTCCTATACAAATACGTTGATAGTCGGCCGGTTGACGCGAAAATCATTGATTTCCAACTGACGCGCTGCGCCTCGCCGGTTCTAGATGTTTCCTTCTTTGTTTACGCGTGCACAACTCGTGAGCTAAGGGACAAACACTACGATGAACTCATTGACTATTATTACGACGTATTGTCGCAAGAAATTCGAAGCTTAGGTAGCGATCCTGATAAGATCTACCCTAAGTCATTGTTCATGGAAGAAATCAAGAAATACTCTTACTTCGGGTTAGGTTTTAGCTTCGAATCGACCCCGTTCATCGTCTTGGCGCCCGAAGATGCTGTTAGTATGGAGATGGAGAGCGAAGAGAAACTTAACATAGACGATTTCTGGCAGGTCAAACCGTTTAAAACTAAGGAAACGAGGCTGAGAGAAGCCAACAACGTCGTACATTGCGTGGACAGGGGATACATATAA
Protein
MADDFKTLTGVSPLITNERLNESLTKWFGEETTFTHWEYVGDTGKGDSYLSELIRIKIYGLNSNKESKHVQCVLKSIPKNVSRRLTFRSNEFFYNEISFYEKVLPELSKFRASKSANEPFDKCPKLLFSYVDGVHDVICLEDESIYDYGGAVRQEGIDYDHAKLSFKVLARFHAISFAMKDQKPDEFERIRKELLETYYHERLWDWYSKFWDRLRFIAIDAVEKEYPNSIYSEKVKEFAVPEIYKKMVDAATNTLDTGVISHGDCWTNNFLYKYVDSRPVDAKIIDFQLTRCASPVLDVSFFVYACTTRELRDKHYDELIDYYYDVLSQEIRSLGSDPDKIYPKSLFMEEIKKYSYFGLGFSFESTPFIVLAPEDAVSMEMESEEKLNIDDFWQVKPFKTKETRLREANNVVHCVDRGYI

Summary

Similarity
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
EMBL
BABH01018468    KZ150238    PZC71946.1    KQ461103    KPJ09463.1    KQ459583    + More
KPI98625.1    JTDY01003092    KOB70161.1    ODYU01012709    SOQ59151.1    NWSH01001035    PCG72996.1    AGBW02013479    OWR43359.1    KPI98624.1    GANO01004535    JAB55336.1    GBYB01000901    JAG70668.1    AJWK01011468    GL439967    EFN66534.1    EFN66535.1    KQ976641    KYM78730.1    GL888273    EGI63534.1    KQ982383    KYQ56907.1    UFQS01000550    UFQT01000550    SSX04802.1    SSX25165.1    CH477290    EAT44634.1    GFDF01006232    JAV07852.1    ADTU01021631    UFQT01000109    SSX20136.1    PYGN01000075    PSN55206.1    GFDF01006231    JAV07853.1    KQ981744    KYN36265.1    JXUM01087313    KQ563625    KXJ73581.1    GAPW01001613    JAC11985.1    GFDL01004655    JAV30390.1    DS231960    EDS29170.1    GGFJ01005787    MBW54928.1    ADMH02002074    ETN59546.1    NEVH01013215    PNF29697.1    GGFM01007670    MBW28421.1    GGFJ01005788    MBW54929.1    AXCM01004215    AAAB01008879    EAA08488.3    APCN01002134    KQ434783    KZC04967.1    GL448516    EFN84469.1    QOIP01000001    RLU27117.1    AXCN02000148    LBMM01010696    KMQ87313.1    KA645128    AFP59757.1    NNAY01005152    OXU16940.1    EGK96978.1    KQ435732    KOX77392.1    CH933810    EDW07140.2    OXU16941.1    CP012528    ALC49638.1    CCAG010013058    CH902635    EDV33769.1    GAKP01005078    JAC53874.1    GDHF01006961    JAI45353.1    GAMC01010354    GAMC01010353    GAMC01010350    JAB96201.1    GDHF01012998    JAI39316.1    KQ414705    KOC63170.1    JRES01000348    KNC32029.1    GBXI01004358    JAD09934.1    CH963738    EDW72132.1    CM000366    EDX17444.1    CH480850    EDW51357.1    CH940660    EDW58155.1    AE014298    AY118900    AAF46408.1    AAM50760.1    CM000162    EDX02219.1    KRK06644.1    GDHF01003392    JAI48922.1    CH479192    EDW26488.1    LBMM01013392    KMQ85660.1    CH379064    EAL32036.1    KRT06790.1    ATLV01026615    KE525415    KFB53212.1    CH954180    EDV46334.1    KQS29935.1    OUUW01000015    SPP88610.1    KYQ56908.1    CH916370    EDV99604.1    RLU26400.1    KYN36266.1    KQ980765    KYN13448.1    KYN13447.1    EGI63533.1    KK107154    EZA56937.1   
Pfam
PF02958   EcKinase        + More
PF00089   Trypsin
PF13202   EF-hand_5
PF13499   EF-hand_7
PF00225   Kinesin
Interpro
IPR004119   EcKinase-like        + More
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR001254   Trypsin_dom       
IPR009003   Peptidase_S1_PA       
IPR011992   EF-hand-dom_pair       
IPR002048   EF_hand_dom       
IPR039647   EF_hand_pair_protein_CML-like       
IPR018247   EF_Hand_1_Ca_BS       
IPR001752   Kinesin_motor_dom       
IPR036961   Kinesin_motor_dom_sf       
IPR027417   P-loop_NTPase       
IPR038105   Kif23_Arf-bd_sf       
SUPFAM
SSF56112   SSF56112        + More
SSF50494   SSF50494       
SSF47473   SSF47473       
SSF52540   SSF52540       
Gene 3D

Ontologies

Topology

Length:
420
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07197
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00666
outside
1  -  420
 
 

Population Genetic Test Statistics

Pi
217.973651
Theta
193.661047
Tajima's D
0.468513
CLR
1.453337
CSRT
0.501474926253687
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 LWDWYSK 100.00 1e-14
25044914 WFDDEEAGGIPR 100.00 1e-07
28467696 WFDNMGDASNYQVPFQINYK 100.00 1e-07
28556443 WFGEETTFTHWEYVGDTGK 100.00 1e-07
28556443 TLTGVSPLITNER 100.00 1e-07
28556443 EYPNSIYSEK 100.00 1e-07
26822097 IIDFQITR 100.00 4e-06
26280517 FGVEIR 100.00 4e-06
27102218 EIIETYYHER 100.00 4e-06
28467696 FIAIDAVEK 100.00 4e-06
27102218 GDSYISEIIR 100.00 1e-05
28556443 IIDFQLTR 100.00 1e-04
28556443 GDSYLSELIR 100.00 1e-04
28556443 LNIDDFWQVKPFK 100.00 0.005
28556443 LNIDDFWQVKPFK 100.00 0.005
28556443 LNIDDFWQVK 100.00 0.005
28556443 IVLAPEDAVSMEMESEEK 100.00 0.005
25044914 SNDNSQIIIEIGPR 100.00 0.013
27102218 VIPEISK 100.00 0.013
28467696 SNDYEIHTEKNYEEIR 100.00 0.013
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