SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16202
Pre Gene Modal
BGIBMGA013969
Annotation
PREDICTED:_ADAMTS-like_protein_1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.992
 

Sequence

CDS
ATGCAGCCGTGTCGAGCGAACTCATCGCTACTGGAAGACGATGTGTGGCGTGAGCAACAGTGCAGCGCTCACGACAGCACCCCGTACGGTGGAGAGCTCTTCCACTGGAGGGCTCATCGGGACGACGCCGAACCCTGCGCTCTGACCTGTAGAGGAGTTCCGCAGCATTCTGGCGTGAGGCCAGAGCCGACTGTGTCACTAGACGAAGACGATCATATCGTGGTGGCTGTGCTCGCCGCAAGAGTGTCAGACGGTACCAGATGCAGGGCAGGAAGTCTGGACATGTGCATTGATGGACGGTGTCAGCGTGTGGGCTGCGATCTTCGGGTTGGTTCAACGAGGAGGGTCGATGAATGCGGTGTCTGCGGAGGAGATGGGTCATCCTGCTCTCGACCGAGGTACCACTGGCTGGCTACGCCTGGATCTCTATGCTCTGCAACATGCGGAGGCGGTTACAAGATGTCTTTGGCGGTGTGTCGCGACCGGCTCACGGGATCAGACGCTCCCGAAGAACTCTGTGACGCCTCAAGCAAACCTCAAACTTCGGTCATGAGATGTAACACGCACCCGTGCCCTTTCAAGTGGTATGTAGGAGAATGGTCATCATGCAGCGTGACTTGTGGCGGTGGCGTCCGCACTCGACGCGTGCTATGCGCTAGATCGGCTAACGTCACGACCGCTGACACTTACGACCCAGGCACGAGCACAGAGCCCGGATGCCTGACACCGTCTCCGAGGTCCTCACAGGCTTGCAACCAGCACGACTGTCCAACTTGGGTAGCCGGACCGTGGTCCGGGTGTTCGGTATCTTGCGGTGAAGGCGTCCAAGTGAGAGGAGTGGAGTGTACTCCAGCTGGAGGTGGCTGCGACCCTTCAACTAGACCGGAAATCACCAGGCCTTGTTCCACTGGCATCAGCTGTCCCGCTTACAGGGAATCTGATGACCCTGAAGATGATATAGACGACCTGCTACCAGGAGTTCTATACCACACGCAGCCTCTCATCCAACAATACCCACCTCCGCAAGCGAAGGCCGAGAGACTTATCGGCGAACCGGATGTTCCACTTGAAGCTACCTACATCAAAGACGATGAGTGGGGTCCCTGTAGCGTCACATGCGGAGAGGGATGGAGAAAAAAGGAGGTCCATTGCAAGATATTCTTAGAGTTTAGTCGAACGATTGCAAAATTGCCCGATAGTAAATGTATGGGACCCAAACCGACCGAAGAAACTGAAAGATGCGTGATGGAGCCATGCTCTATGGCCTACGGAACTTCGTTTGGGGACTCTAGTGCCCCTTCTTACAGCGGCGCTGATAGGTCTTTAACTTATGGTACCTCAAGTAACATCAGGGTGGCCCCTGGATCTCCTGGCAAATCATACTCCTGGAAGGAAAAAGGCTATACCAGTTGCAGTGCGTCTTGTCTCAGTGGAGTCCAAGAACTTATAATTCAATGCGTGCGAGATGAAGATGGTAAGAACGCATCACCATACATGTGCGACCCTCACACCAAACCCGAGAACAGAGTTAGGACCTGCAATGATCACCCGTGTCCCCCACGTTGGAACTATACAGAATTCTCACAATGTACAAAATCATGCGGCATCGGTATCCAGACTAGAGAAGTAACTTGCATACATGAGGTAACACGTGGTGGTACCAACACAGTCGTGGTACCTAACAGCATGTGTCCGCAACCACCACCACCGGACCGGCAGTACTGCAATGTGCTAGACTGTCCAGTCAGATGGCATACAGGGGAGTGGACCAAATGCTCCAAAACCTGTGGCGGGGGCGTTAAGCAGAGAGAGGTTGAATGCAAGCAAATAATGGCGCAGTCCCACGTAGTAGAACGTCCGGCATCGCTGTGCAGCTCACCTCGTCCGCCATCCACGAAGTCTTGCAACAGTCGACCCTGTTTACTGGATACGTCATCGCCGGAGATATCTCTCGCTAACTCGTCTTATATTCAGCACGACCCTAAGAAGAAGAAGGTGACAGTAAAAGTGGGAGGTTCGGCGACTATTTTTTTCGGGACCCAAGTGAAAATAAAATGTCCTGTCAAAGGATACAACAGGACAAGGATACAGTGGGCGAAGGACAATCAGATTATAACGAAATCCAAGAAATACAAGATATCTAGGAAAGGCGCTCTACGAATCACGACCCTGTCGTTCAGAGACCACGGTGTATACACCTGCGTCGCTGGAAGATCTAACGCGAATTTGACGTTACTTGTGAAGCCAAGACCTGGAGAGTTCCCTTCTAGCGAAGAAATCGAGCGGCATAAGGCTTTAGATGAACCGTCATCACCTTTATCCGACAGCAGAGCGGATGGCAGATACAGAGCCATGACCGGTGGAGCTTCAGATGATCAGTCTCACGAACAACGACCTGGAGACCAAAGAAAAAATTACAAGAACCGCCAGAAAACAGGTAAAACAGATAAAGTAAGAGAAACATTATACAGTCAAACGGCTACTACAAAAGCAACGCCCAGCTTCAATCCCCAAGCCAGAGATATTTACGACGAAAATGAGGAAAGTGCTGTGTCTTCACGGATGCTACCGCCCAAACGTAGCAGTGCCGGCAGGCTTCTGCCATGCCTCCATTACATAGTCATGCAGCTTCAGATGTTTTGGAATTTTCAGACCGTAGGCAACTCGCGAGGGCAACGGACCGTCGATCCGATACTGATGTACCAGAACTACGGTTCGCAAACGAATCGAATTTTAAATTACGAGGACAAACAGATCGTATTCCCCGAAGATGACGATTCTGATATCATAATCGTGAACGAAGATTACGCTAAGCAGACGTATAAAGAAAACGATTTGAATTTAAAAGAAAATCTTCTTGAAGTTGAACCTACTACTGAAACGAGAATTACCACAGCTTCGGACATAATGGAATACGCTTGGAAGACAACGGACTGGTCTCCTTGCAATGCTGTATGTGGGCAAATCGGTCACCAAGTTAGAGGAGCCATGTGCCAGCATAAAACAGTGAATCAAACGACAACGGTCGAAACAGAAGAATGCCTATCCAGAGGTTTGATCCCTCCGAAGGTGGTGCTCGAGTGTGGCGGAGACAATTGTGCCAATTGGAAAACTTCGCGGTGGTCATCACGTAGATGCCTCAGGAGTGGAACTGCTATAATTCGGCGTCGAGTTGATTGCACTGCTGACAATGGAAGCGTCTTGCCGCAATCCTCATGTGACTTCACAACGAAACCCGAGAAGATTAGAAAGGACGGAAAGCCATGCACGGCGACTTGGGACGTGGGTCCTTGGACTAAGTGTAAGGGTGAATGCGGTAGTCGTGGCAGACAACACCGCACCCTGCGCTGTGTGTGGCGTACGGGGGGCGGGATGGGCGCGCGGGGGGCACCAGGAGATAGAGGGGCGCGGGGCGCTGGCGTCGCTTGCCGTGACCTACGCCGACCGGCAGTGTTGAGAGACTGTCCTCTACAGCACTGTGTAAGCAATGATGGCGTGTGCAGGGACACGTCGCGATTCTGCGAGAACGTCAGGGCAATGAACATGTGCGCCTTGAAGAGATATAAGGAGCAATGCTGCAAGACTTGTTCCGACTGA
Protein
MQPCRANSSLLEDDVWREQQCSAHDSTPYGGELFHWRAHRDDAEPCALTCRGVPQHSGVRPEPTVSLDEDDHIVVAVLAARVSDGTRCRAGSLDMCIDGRCQRVGCDLRVGSTRRVDECGVCGGDGSSCSRPRYHWLATPGSLCSATCGGGYKMSLAVCRDRLTGSDAPEELCDASSKPQTSVMRCNTHPCPFKWYVGEWSSCSVTCGGGVRTRRVLCARSANVTTADTYDPGTSTEPGCLTPSPRSSQACNQHDCPTWVAGPWSGCSVSCGEGVQVRGVECTPAGGGCDPSTRPEITRPCSTGISCPAYRESDDPEDDIDDLLPGVLYHTQPLIQQYPPPQAKAERLIGEPDVPLEATYIKDDEWGPCSVTCGEGWRKKEVHCKIFLEFSRTIAKLPDSKCMGPKPTEETERCVMEPCSMAYGTSFGDSSAPSYSGADRSLTYGTSSNIRVAPGSPGKSYSWKEKGYTSCSASCLSGVQELIIQCVRDEDGKNASPYMCDPHTKPENRVRTCNDHPCPPRWNYTEFSQCTKSCGIGIQTREVTCIHEVTRGGTNTVVVPNSMCPQPPPPDRQYCNVLDCPVRWHTGEWTKCSKTCGGGVKQREVECKQIMAQSHVVERPASLCSSPRPPSTKSCNSRPCLLDTSSPEISLANSSYIQHDPKKKKVTVKVGGSATIFFGTQVKIKCPVKGYNRTRIQWAKDNQIITKSKKYKISRKGALRITTLSFRDHGVYTCVAGRSNANLTLLVKPRPGEFPSSEEIERHKALDEPSSPLSDSRADGRYRAMTGGASDDQSHEQRPGDQRKNYKNRQKTGKTDKVRETLYSQTATTKATPSFNPQARDIYDENEESAVSSRMLPPKRSSAGRLLPCLHYIVMQLQMFWNFQTVGNSRGQRTVDPILMYQNYGSQTNRILNYEDKQIVFPEDDDSDIIIVNEDYAKQTYKENDLNLKENLLEVEPTTETRITTASDIMEYAWKTTDWSPCNAVCGQIGHQVRGAMCQHKTVNQTTTVETEECLSRGLIPPKVVLECGGDNCANWKTSRWSSRRCLRSGTAIIRRRVDCTADNGSVLPQSSCDFTTKPEKIRKDGKPCTATWDVGPWTKCKGECGSRGRQHRTLRCVWRTGGGMGARGAPGDRGARGAGVACRDLRRPAVLRDCPLQHCVSNDGVCRDTSRFCENVRAMNMCALKRYKEQCCKTCSD

Summary

EMBL
AGBW02007938    OWR54407.1    KQ461103    KPJ09464.1    KQ459583    KPI98622.1    + More
KQ971354    KYB26430.1    DS231946    EDS28372.1    DS235014    EEB10483.1    APCN01005202    CH477641    EAT37928.2    ABLF02022402    ABLF02028322    ABLF02028323    ABLF02028327    ABLF02028328    ABLF02028329    ABLF02028330    ABLF02028331    ABLF02028332    ABLF02045220    QOIP01000002    RLU25559.1    GEBQ01029403    JAT10574.1    ADTU01005578    ADTU01005579    ADTU01005580    ADTU01005581    ADTU01005582    ADTU01005583    ADTU01005584    ADTU01005585    ADTU01005586    ADTU01005587    UFQT01000377    SSX23729.1    KQ434777    KZC04170.1    NNAY01000275    OXU29559.1    KZ288212    PBC32890.1    GFXV01004128    MBW15933.1    SSX23730.1    GBXI01012078    JAD02214.1    KK107138    EZA57954.1    GBXI01007905    JAD06387.1    AAAB01008964    KQ976768    KYN08468.1    NEVH01013202    PNF29899.1    NCKU01000253    RWS16311.1    CH940649    EDW63222.2    KRF80969.1    CH933807    KRG03024.1    AXCN02002072    CH379058    KRT03578.1    EAL34484.3    KRT03579.1    AE014134    ABI31328.1    AFH03802.1    EAA43967.4    CH479184    EDW36932.1    OUUW01000024    SPP89602.1    CH963920    EDW78188.2    CM002910    CM002911    KMY91438.1    KMY91583.1    KMY91484.1    CM000361    EDX05755.1    KMY91372.1    ACPB03011476    CH954179    EDV54374.2    KMY91377.1    KMY91379.1    CH902620    KPU73565.1    EDV31706.2    CM000158    KRJ98785.1    KRJ98786.1    ACZ94326.1    GGMR01005769    MBY18388.1    KPU73562.1    KMY91375.1    AHN54641.1    AAF57229.2    ATLV01013273    KE524849    KFB37635.1    KRJ98787.1    KMY91374.1    EDW89920.2    JXUM01034442    JXUM01034443    JXUM01034444    JXUM01034445    JXUM01034446    JXUM01034447    JXUM01034448    JXUM01034449    KQ561023    KXJ79989.1    GDIP01197164    JAJ26238.1    GL442820    EFN62926.1    GDIQ01239176    JAK12549.1    GDIQ01167903    JAK83822.1    GDIQ01125266    JAL26460.1    GDIQ01127017    JAL24709.1    GDIQ01067284    JAN27453.1    GDIQ01181745    GDIQ01180391    GDIQ01064432    JAK69980.1    GDIQ01177550    JAK74175.1    GDIQ01094668    JAL57058.1    GDIQ01029149    JAN65588.1   
Pfam
PF07679   I-set        + More
PF08686   PLAC
PF00090   TSP_1
Interpro
IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf       
IPR010909   PLAC       
IPR000884   TSP1_rpt       
IPR036383   TSP1_rpt_sf       
IPR013098   Ig_I-set       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013783   Ig-like_fold       
IPR013273   ADAMTS/ADAMTS-like       
IPR000402   Na/K_ATPase_sub_beta       
SUPFAM
SSF48726   SSF48726        + More
SSF82895   SSF82895       
Gene 3D
PDB
3R6B     E-value=2.7377e-05,     Score=118

Ontologies

Topology

Length:
1198
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00579
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00016
outside
1  -  1198
 
 

Population Genetic Test Statistics

Pi
22.028659
Theta
169.097192
Tajima's D
0.996574
CLR
0.170615
CSRT
0.653117344132793
Interpretation
Uncertain
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