SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16198
Pre Gene Modal
BGIBMGA013922
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_inner_centromere_protein_A_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.164
 

Sequence

CDS
ATGTCAGTTTTCAACGAATTACTGCCTAAAATCTGTGAAATTTCGAAAACAATTAGAAAAAATTTCAACGATGACCTGAAGGTTGCGTTTGAACGGTTAGATAAGTTTGAAGAGGAGTTTCAAAAAGGACGCACCAAGGCGCGGGAGAAAATCGCAAAAGATAAGAACCAAGGGCCAATCCTTCAGATCATTAATGAAGACGAAGATGAATTGGTAAAACACCCATCAGAAACCAATGAGAAGCCAAGTGACAAATCCAACACAGACACAACCAGCAGAAGTTCAATTGAAAGTAACTCTGATAACACCCAAAGAGGATCTAAAAAACGAAATAAGAATGAAGTTGATGGATTATTTAGTCCAGAACAGGATAAAAGATTGAAAAGAAATGCTTCTGTAAAAGCTCAGAGTATTATTAGCAAACAGGTGAATGTAAATTTAACTCAAAAACTGCGTAGAGAGAATTCTTCAGCTAAAAATGATAAACAGAATCAACCAAAAGATGATGACAAAGAAAATGAACCAATTTCAAACATTCAGATTAAACAAGAAAAGATATCGCTGCCTCCCGAGTCTATGGAAACTGAATCATTGCCCTCAGATATTGAAATAAAACAAGAAAATGATTTTGCTATGCCTCCACCAGTTGCTCCAGTACCAAAACTTCGTAAAGCTGTTACTAAAGAGAAGTCACGTGATGAAGGGAGTAGTTCCGATGAAGGGACGCAATATAGGACCACAAGAAACAAGAAACAGGCTGACATGATGCCGCCACCGGTTGTACCGTCTGCCAGATCAACTCGGGCCAGTTCCAGAGCAACAAGGAATATTGAAACAGAAGATAGTTCTGCTGATTCCAGAACTAAACGGACTCGAACTAAGAAGAAAGCATCAGAAGCAGTGGCTGTTGAACTGGAGAAAAATGAACTGACACATAACAATTCTAATTCAAGACGAATGAGGAATAATGAAACAGAAGAAGCACCGGTTGAGGGCAGACCTAAACGGACTCGAGCTAAGAAGAAGGCATCGGAGCTAGTGGCTGCCGAGCCGCCACAAAACGAGACAACACAAGAAACTTTACCAGCTTCGCCCGCGGAAAAGCCACGACCAAAGCGCACGAGGAGACTACAAAAAGCTGCTGAGAAAGACACTCCGAAAATTGAAGAATCATCTCCGGAATTGATTTCGCCTAAAGAGGAACGCTTGTCGCAACCAAACGAGATTCAGTCGCCTATTCTACAGAAATCTAAAATTGTGACTGCAAATAAAACGAATAACACGGAACAAACCATCGAAATAAACAACACGCAGGACACCGACGCTGCCGACACTCATCAAGATGGCGGCCTAACACAAAATGGCGGACAGGAAGCGACGTCACAAGACGTATTAGACGAAACGAAAGTGATCCTAGCACCCAACGCTACGTTTAATTTGAAGGAAATGGATAAGACAATGGTCCTGCCGAATGGAGTTTATAACCATGCTCCCGTAACACCTAAGAATGTCGTTCAGATGAACGAAACTGTCGTCCTGGAGAGACGCGCTTCCCAAACTGCGCCGCCGGGGAAAGAACAAAACGTAATACTGGACGCCACAGTTGTTCTCGACAAAGGCACAAAAGTAAATATGACTGAGGACAATTCATTACTGACGGACGACAGCGACGTCCCGGAGACCAGCACGCCTCCCCGGCAAGAGGTGCCCGCCGCGCAACCCAAGTCCGCTGTGAAAGAGAAAGTGCAGCAGTTTGAAGAGCTGGCCTCCAGAGTCACCAGGACCAAGACCAGAGCCATGGCCAAGAAGGAGGAGCGGCCCGAAGACCATACCCCGCCCGACCGGAAGGCGAAGGCCGCGCTGTCAGCCGACACCTTGAGCAAGATGAACTCTATGATCTTCAACGGGAAACTGCCACAGGTGTCCAGCTCGGCGTCGAAACCCCGGCCCGTGACCGCCACCAGCGCGAAGCCACCACTGCCGGCCTCCACGTCCAAGCTGAGCGCCGTCAGCAGAGCCCGGGAAGCCGCCGAGGAGTCCATCAGGAGCGAGAAGGAAGACGCCAGGAAAAAGAAAGAGGCCATGCTTGAAGCCAAGCGGGAGATGCAAAAGCGTAAGCGCGAGGAGAAGATGGCTGCTGCGGCCGCGGCACGATCTGCCGCAGAGCTGAGCCGCGCACGCGCCGTACAGGACGCTGCCCGGGAGCGCGCGCAGAGACAGGCGCTCGCTGACAAGGAGCGCAGGGAGCGAGTCAAGGAAGTTGAGAGGAAGAAACAAGAGTTGGCTCGTAAAGTAGCCGAAACAGAAGAGCGACGTAAGGCAGAGGAGCAGGCCCGGCAGCAGCGGCTGGCGGAGGAGCAGAGACGCGCCGAAGCCGCCAGGAAGAAACAACTCGAAGAGGCTGCGGCAATGGAAAAAGAAGCGGCGATGATGGCGAAAGAGATTGAGAAACGACAAAAAGAATACATTGAAAAGAAGAAAATGAAACAAAGGATGGAGGAAAAAATGCACACTCCACTAAAAATGCAAGGAACACCAAGCCACACGTACCCAATGGAACCTGTCTACATGCAGGACGGCTTCCAGTATCTCAACTCTGATGAAGATGAACCATCCAATCATGGACACGTGCCCGAATGGAGTACTAGCAAGGCTCGAAGACTACAATTGTACGTGCAAACACAACTGTCTCAAAGTCACATTGACAAGTTGTTCTCGGTTCGAGTCCACAGTCCTGATTTGAGGGAGATATTCCCAAACATAGACCGTTCTAGATTGAAACGTACTTCTTCAGCGGTGTGGAGGACACCGCCTAACAGATTACCAGCCGTACACGAGTGA
Protein
MSVFNELLPKICEISKTIRKNFNDDLKVAFERLDKFEEEFQKGRTKAREKIAKDKNQGPILQIINEDEDELVKHPSETNEKPSDKSNTDTTSRSSIESNSDNTQRGSKKRNKNEVDGLFSPEQDKRLKRNASVKAQSIISKQVNVNLTQKLRRENSSAKNDKQNQPKDDDKENEPISNIQIKQEKISLPPESMETESLPSDIEIKQENDFAMPPPVAPVPKLRKAVTKEKSRDEGSSSDEGTQYRTTRNKKQADMMPPPVVPSARSTRASSRATRNIETEDSSADSRTKRTRTKKKASEAVAVELEKNELTHNNSNSRRMRNNETEEAPVEGRPKRTRAKKKASELVAAEPPQNETTQETLPASPAEKPRPKRTRRLQKAAEKDTPKIEESSPELISPKEERLSQPNEIQSPILQKSKIVTANKTNNTEQTIEINNTQDTDAADTHQDGGLTQNGGQEATSQDVLDETKVILAPNATFNLKEMDKTMVLPNGVYNHAPVTPKNVVQMNETVVLERRASQTAPPGKEQNVILDATVVLDKGTKVNMTEDNSLLTDDSDVPETSTPPRQEVPAAQPKSAVKEKVQQFEELASRVTRTKTRAMAKKEERPEDHTPPDRKAKAALSADTLSKMNSMIFNGKLPQVSSSASKPRPVTATSAKPPLPASTSKLSAVSRAREAAEESIRSEKEDARKKKEAMLEAKREMQKRKREEKMAAAAAARSAAELSRARAVQDAARERAQRQALADKERRERVKEVERKKQELARKVAETEERRKAEEQARQQRLAEEQRRAEAARKKQLEEAAAMEKEAAMMAKEIEKRQKEYIEKKKMKQRMEEKMHTPLKMQGTPSHTYPMEPVYMQDGFQYLNSDEDEPSNHGHVPEWSTSKARRLQLYVQTQLSQSHIDKLFSVRVHSPDLREIFPNIDRSRLKRTSSAVWRTPPNRLPAVHE

Summary

ProteinModelPortal

Ontologies

GO

Topology

Length:
946
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  946
 
 

Population Genetic Test Statistics

Pi
208.686809
Theta
150.361426
Tajima's D
1.021246
CLR
0.94528
CSRT
0.674216289185541
Interpretation
Uncertain
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