Gene

KWMTBOMO16197  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013965

Annotation

H+_transporting_ATP_synthase_gamma_subunit_[Bombyx_mori]

Location

Bomo_Chr28(+):1147727-1152308      View in EpiBrowser

Full name

ATP synthase subunit gamma       + More
ATP synthase subunit gamma, mitochondrial      

Alternative Name

F-ATPase gamma subunit

Location in the cell

Mitochondrial   Reliability : 3.707

CDS

ATGTTGGGACGCTTCGGACCGGGTGTCGGCACCCAAGTCGTGGCGGTGGTTTACCATCAGCCAAACAGGAATATGGCTACTTTGAAGGCCATTTCCATCCGTCTTAAATCTGTGAAAAATATCCAGAAAATCACACAGTCCATGAAGATGGTGTCAGCTGCTAAATACACCCGTGCTGAGCGTGACCTGAAAGCTGCTCGTCCCTATGGTGAAGGTGCAGTACAGTTCTATGAAAGGGCTGAGGTTACACCTCCCGAAGATGACCCCAAGCAATTGTTTGTTGCTATGACCTCTGACAGAGGTTTGTGCGGAGCTGTACACACTGGTGTATCCAAAGTGATCCGCAACCGTCTCAGCGAACCTGGTGCTGAGAACATCAAGGTGATCTGTGTGGGAGATAAATCTCGCGGTATCCTGCAGAGATTGTACGGAAAGCACATCATTAGTGTTGCTAATGAGATCGGACGTCTCCCACCTACTTTCTTGGACGCAAGTCAGCTGGCCACTGCTATCCTCACCTCGGGATACGAGTTTGGTTCCGGAAAGATCATTTACAACAAGTTCAAGTCTGTGGTCTCGTACGCCCAGTCCGACTTGCCCCTCTACACTAAGAAGTCTATTGAGAGCGCCAGCAAGCTGACTGCGTACGACTCTCTGGACAGCGACGTGCTCCAATCCTACACGGAGTTCTCGCTGGCCTCGCTGTTGTTCTACGCGCTGAAGGAGGGCGCCTGCTCAGAGCAGTCGTCCCGCATGACCGCCATGGACAACGCCTCCAAGAACGCCGGCGAGATGATCGACAAGCTGACCCTCACGTTCAACAGGACCCGTCAAGCTGTCATCACCAGGGAGCTCATCGAGATCATCTCTGGTGCGGCCGCCTTGGACTAA

Protein

MLGRFGPGVGTQVVAVVYHQPNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD

Subunit

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c.

Similarity

Belongs to the ATPase gamma chain family.

Keywords

ATP synthesis   Complete proteome   Hydrogen ion transport   Ion transport   Membrane   Mitochondrion   Mitochondrion inner membrane   Reference proteome   Transit peptide   Transport  

Feature

chain  ATP synthase subunit gamma

Uniprot

Q1HPX4   S4NNE5   I4DJ96   A0A212F7F8   A0A194QVY4   A0A2H1WBL5   + More
A0A3S2TJQ6   A0A2A4JBB2   A0A2W1B7N2   A0A3G1T1C7   G9D519   A0A2J7PRF8   A0A067RHY8   A0A2P8Z4D8   B0W2W3   A0A084WHB1   A0A182QIX0   A0A182NTJ6   A0A182LYU4   A0A182W7I1   A0A182UP01   A0A182L1Z8   A0A182UFE6   A0A182HV43   A0A182PD01   A0A182XZU4   Q16XK3   A0A1W4WJB5   W5JNX9   A0A182WT48   A0A2M4BVD1   A0A182RJB1   A0A2M4A2J6   A0A182F302   A0A182JWN3   Q7Q3N8   A0A2M4BWD1   A0A023ENY5   A0A2M3YZ82   T1DPU9   U5EXE4   A0A1Q3FGI6   D6WPW7   B3MTI4   A0A1Y1LVM0   A0A0M4ET73   A0A0L0C3Z3   A0A182J7L3   C6ZQR8   B4G663   Q29AN8   O01666   J3JTS0   A0A232EVT9   W8BR16   U5EWI7   K7J3Z6   V5I9Q2   B4R084   B4PPK7   B4HZE2   B3P5D7   A0A3B0JKR2   A0A0K8VMQ3   A0A034WFC0   A0A0C9PX20   A0A1W4UQ62   A0A026WWE4   E0VFT5   A0A0A1WI89   T1PF90   A0A1L8E0N4   A0A1B6BXB8   A0A1L8EEQ6   A0A1I8QC49   B4NBL2   A0A1D1ZG56   A0A0K8U3G5   B4M5T2   A0A151WJ89   E9IJZ3   T1HN70   A0A224XPP2   A0A0V0G371   A0A0P4VV79   R4FNB9   A0A069DRH5   Q1W291   A0A2R7WX91   Q6PPH6   A0A158NT33   R4WIF5   A0A195EFE8   B4JYM7   A0A195BHB1   F4WG50   A0A154PEW2   A0A0J7KT88   A0A1S4ECU0   A0A1A9VLY0  

Pubmed

19121390    23622113    22651552    26354079    22118469    28756777    + More
21967427    24845553    29403074    24438588    20966253    25244985    17510324    20920257    23761445    12364791    14747013    17210077    24945155    26483478    18362917    19820115    17994087    28004739    26108605    20496585    15632085    23185243    10731132    12537572    12537569    10071211    22516182    23537049    28648823    24495485    20075255    17550304    25348373    24508170    30249741    20566863    25830018    25315136    21282665    27129103    26334808    21347285    23691247    21719571   

EMBL

BABH01018421    DQ443278    ABF51367.1    GAIX01012289    JAA80271.1    AK401364    + More
KQ459583    BAM17986.1    KPI98617.1    AGBW02009877    OWR49666.1    KQ461103    KPJ09474.1    ODYU01007571    SOQ50453.1    RSAL01000091    RVE47997.1    NWSH01002112    PCG69139.1    KZ150244    PZC71889.1    MG846921    AXY94773.1    JF777422    AEU11767.1    NEVH01022362    PNF18917.1    KK852622    KDR19994.1    PYGN01000201    PSN51362.1    DS231829    EDS30322.1    ATLV01023800    KE525346    KFB49605.1    AXCN02000699    AXCM01002571    APCN01002493    CH477537    EAT39355.1    ADMH02000571    ETN65841.1    GGFJ01007886    MBW57027.1    GGFK01001696    MBW35017.1    AAAB01008964    EAA12854.3    GGFJ01007887    MBW57028.1    JXUM01116988    GAPW01002938    KQ566040    JAC10660.1    KXJ70434.1    GGFM01000831    MBW21582.1    GAMD01003014    JAA98576.1    GANO01002578    JAB57293.1    GFDL01008377    JAV26668.1    KQ971354    EFA07448.1    CH902623    EDV30574.1    GEZM01050230    GEZM01050229    JAV75666.1    CP012526    ALC48060.1    JRES01001003    KNC26199.1    EZ114869    ACU30922.1    CH479179    EDW23816.1    CM000070    EAL27311.1    AE014297    AY113454    Y12701    APGK01025935    BT126629    KB740605    KB632095    AEE61592.1    ENN80061.1    ERL88735.1    NNAY01001960    OXU22447.1    GAMC01010884    JAB95671.1    GANO01002937    JAB56934.1    AAZX01000987    GALX01002540    JAB65926.1    CM000364    EDX14890.1    CM000160    EDW98257.1    CH480819    EDW53399.1    CH954182    EDV53187.1    OUUW01000007    SPP82914.1    GDHF01012143    JAI40171.1    GAKP01006469    JAC52483.1    GBYB01006053    JAG75820.1    KK107085    QOIP01000008    EZA60056.1    RLU19527.1    DS235124    EEB12241.1    GBXI01015931    JAC98360.1    KA647354    AFP61983.1    GFDF01001781    JAV12303.1    GEDC01031639    JAS05659.1    GFDG01001618    JAV17181.1    CH964232    EDW81176.1    GDJX01002097    JAT65839.1    GDHF01031075    JAI21239.1    CH940652    EDW59008.1    KQ983039    KYQ47922.1    GL763908    EFZ19110.1    ACPB03017427    GFTR01004628    JAW11798.1    GECL01003595    JAP02529.1    GDKW01000647    JAI55948.1    GAHY01001359    JAA76151.1    GBGD01002379    JAC86510.1    DQ445536    ABD98774.1    KK855861    PTY24152.1    AY588070    AAT01082.1    ADTU01025481    AK417185    BAN20400.1    KQ978957    KYN27000.1    CH916377    EDV90789.1    KQ976488    KYM83613.1    GL888128    EGI66817.1    KQ434889    KZC10395.1    LBMM01003366    KMQ93607.1   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000283053    UP000218220    + More
UP000235965    UP000027135    UP000245037    UP000002320    UP000030765    UP000075886    UP000075884    UP000075883    UP000075920    UP000075903    UP000075882    UP000075902    UP000075840    UP000075885    UP000076408    UP000008820    UP000192223    UP000000673    UP000076407    UP000075900    UP000069272    UP000075881    UP000007062    UP000069940    UP000249989    UP000007266    UP000007801    UP000092553    UP000037069    UP000075880    UP000008744    UP000001819    UP000000803    UP000019118    UP000030742    UP000215335    UP000002358    UP000000304    UP000002282    UP000001292    UP000008711    UP000268350    UP000192221    UP000053097    UP000279307    UP000009046    UP000095301    UP000095300    UP000007798    UP000008792    UP000075809    UP000015103    UP000005205    UP000078492    UP000001070    UP000078540    UP000007755    UP000076502    UP000036403    UP000079169    UP000078200   

PRIDE

Q1HPX4    O01666   

Pfam

PF00231   ATP-synt        + More
PF00467   KOW
PF17136   ribosomal_L24

Interpro

IPR000131   ATP_synth_F1_gsu        + More
IPR023632   ATP_synth_F1_gsu_CS       
IPR035968   ATP_synth_F1_ATPase_gsu       
IPR003256   Ribosomal_L24       
IPR014722   Rib_L2_dom2       
IPR041988   KOW_RPL26/RPL24       
IPR008991   Translation_prot_SH3-like_sf       
IPR005825   Ribosomal_L24/26_CS       
IPR005824   KOW       

SUPFAM

SSF52943   SSF52943        + More
SSF50104   SSF50104       

Gene 3D

2.30.30.30    

CDD

cd12151  F1-ATPase_gamma
cd06089  KOW_RPL26

ProteinModelPortal

Q1HPX4   S4NNE5   I4DJ96   A0A212F7F8   A0A194QVY4   A0A2H1WBL5   + More
A0A3S2TJQ6   A0A2A4JBB2   A0A2W1B7N2   A0A3G1T1C7   G9D519   A0A2J7PRF8   A0A067RHY8   A0A2P8Z4D8   B0W2W3   A0A084WHB1   A0A182QIX0   A0A182NTJ6   A0A182LYU4   A0A182W7I1   A0A182UP01   A0A182L1Z8   A0A182UFE6   A0A182HV43   A0A182PD01   A0A182XZU4   Q16XK3   A0A1W4WJB5   W5JNX9   A0A182WT48   A0A2M4BVD1   A0A182RJB1   A0A2M4A2J6   A0A182F302   A0A182JWN3   Q7Q3N8   A0A2M4BWD1   A0A023ENY5   A0A2M3YZ82   T1DPU9   U5EXE4   A0A1Q3FGI6   D6WPW7   B3MTI4   A0A1Y1LVM0   A0A0M4ET73   A0A0L0C3Z3   A0A182J7L3   C6ZQR8   B4G663   Q29AN8   O01666   J3JTS0   A0A232EVT9   W8BR16   U5EWI7   K7J3Z6   V5I9Q2   B4R084   B4PPK7   B4HZE2   B3P5D7   A0A3B0JKR2   A0A0K8VMQ3   A0A034WFC0   A0A0C9PX20   A0A1W4UQ62   A0A026WWE4   E0VFT5   A0A0A1WI89   T1PF90   A0A1L8E0N4   A0A1B6BXB8   A0A1L8EEQ6   A0A1I8QC49   B4NBL2   A0A1D1ZG56   A0A0K8U3G5   B4M5T2   A0A151WJ89   E9IJZ3   T1HN70   A0A224XPP2   A0A0V0G371   A0A0P4VV79   R4FNB9   A0A069DRH5   Q1W291   A0A2R7WX91   Q6PPH6   A0A158NT33   R4WIF5   A0A195EFE8   B4JYM7   A0A195BHB1   F4WG50   A0A154PEW2   A0A0J7KT88   A0A1S4ECU0   A0A1A9VLY0  

PDB

2W6J     E-value=2.9351e-86,     Score=810

KEGG

732965    K02136 F-type H+-transporting ATPase subunit gamma | (RefSeq) H+ transporting ATP synthase gamma sub

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0046933   GO:0045261   GO:0015986   GO:0003735   GO:0006412   GO:0005840   GO:0006754   GO:0006811   GO:0000275   GO:1902600   GO:0005739   GO:0016301   GO:0016791   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR11693  

Subcellular location

Mitochondrion  
Mitochondrion inner membrane  

Length:

296

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02179

Exp number, first 60 AAs:

0.0066

Total prob of N-in:

0.00296

outside

1  -  296

 

 

Pi

166.748796

Theta

135.371392

Tajima's D

0.877914

CLR

0.577228

CSRT

0.627418629068547

Interpretation

Uncertain