Silkworm Genome Informatics Database

Gene

KWMTBOMO16193

Pre Gene Modal

BGIBMGA013962

Annotation

Uncharacterized_protein_OBRU01_17295?_partial_[Operophtera_brumata]

Location

Bomo_Chr28(+):1066927-1068824 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.141 Mitochondrial Reliability : 1.084

CDS

ATGGCGTTGATTTTAGGAGGACCTCTGGTCAGGGAAGGGAGACAGGTTGGCGTGGTGTCATGGGGCATACCTTGCGCGAGAGGCAAACCTGATGTATACACTAAAGTGGAAGCATTCATGAGATGGATAGAGAATACTCTATACGAAGACGACGAAGATCACCTGAAATATTTAAACCGTAGAAAAACGAATAGACACTAA

Protein

MALILGGPLVREGRQVGVVSWGIPCARGKPDVYTKVEAFMRWIENTLYEDDEDHLKYLNRRKTNRH

Similarity

Belongs to the peptidase S1 family.

Uniprot

A0A0L7L1H7 A0A3S2NS83 A0A2A4JXA5 A0A2W1BDL5 A0A0N0P9U8 A0A194PZ53 + More
A0A0N1PJ78 A0A212ELH6 A0A194QMQ6 A0A232EZ15 A0A1B0DLA6 K7J028 A0A194PIR8 A0A1W4XLB1

Pubmed

26227816 28756777 26354079 22118469 28648823 20075255 + More

EMBL

JTDY01003703 KOB69119.1 RSAL01000269 RVE43195.1 NWSH01000497 PCG76022.1 + More
KZ150244 PZC71884.1 KQ459118 KPJ03785.1 KQ459583 KPI98612.1 KQ460599 KPJ13815.1 AGBW02014066 OWR42328.1 KQ461195 KPJ06629.1 NNAY01001573 OXU23549.1 AJVK01070972 KQ459606 KPI90985.1

Proteomes

UP000037510 UP000283053 UP000218220 UP000053268 UP000053240 UP000007151 + More
UP000215335 UP000092462 UP000002358 UP000192223

Pfam

PF00089 Trypsin

Interpro

IPR033116   TRYPSIN_SER        + More
IPR001254   Trypsin_dom
IPR009003   Peptidase_S1_PA
IPR018114   TRYPSIN_HIS
IPR001314   Peptidase_S1A
IPR012224   Pept_S1A_FX

SUPFAM

SSF50494 SSF50494

CDD

cd00190 Tryp_SPc

ProteinModelPortal

A0A0L7L1H7 A0A3S2NS83 A0A2A4JXA5 A0A2W1BDL5 A0A0N0P9U8 A0A194PZ53 + More
A0A0N1PJ78 A0A212ELH6 A0A194QMQ6 A0A232EZ15 A0A1B0DLA6 K7J028 A0A194PIR8 A0A1W4XLB1

PDB

1EQ9 E-value=2.95676e-10, Score=149

KEGG

101743659 no KO assigned | (RefSeq) chymotrypsin-1-like

GO

GO:0004252 GO:0008236 GO:0007596 GO:0005509 GO:0006508 GO:0008270 GO:0016311 GO:0016791 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

Length:

66

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0004

Exp number, first 60 AAs:

0.0004

Total prob of N-in:

0.07140

outside

1 - 66

Pi

43.904664

Theta

58.56837

Tajima's D

-0.780691

CLR

272.269902

CSRT

0.181390930453477

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics