Silkworm Genome Informatics Database

Gene

KWMTBOMO16188

Pre Gene Modal

BGIBMGA013928

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Papilio_machaon]

Location

Bomo_Chr28(-):799810-842606 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.412

CDS

ATGGCGGGCTCGAGGGAGCGTCTCCTTTACGAGAGGAAGCCTGATTACGACTCCGAATACTATCGTCAAAGATTCGAGCTACACGATCGGGAATCGAACAGGAATCGGCAGGAACAAAAGCCGCCGCGCTACTACAGACCGAAACGTACCAACGGGTACGTCTACGAAGACATATACTCGGACTTCGACGAGGCGCAGGGCCGGCTGTCCCTGTTCAGGCCAATCAGACCGGAGTACCTAAACCTGCCGACTTCGTATGACGTTAAATACAATTCCCTACCCCGAAACTACTTCGATTACGACGAAAGACGAAGAAACAGGAAAGACAATTACGATTTTCGAATCCATAACGAGAGGAGGAATGCCGAGTATTACCGGAAAAGGCCGAGAGAGGTCGTGAGCGAAATACGAAATTCAAAGCCCAAGAACGTGGCGGTCTGCAAGCCGTTACGTTTCGAAAAGAACGCTCGGTATTGGACCACGGACCCGCCCGAGCGCGGCCGAACACGCCCGAAGAAACCCGACGAACCAAAGAAGAACGTTAAGTTCTCCGAAGTTTCCGGCTGCAATCGTAAAATGATCGTAGACGACCCGATCGTAGGCCGGAAAATCGTCCCAGTGCGCGAACTCGAAGTGTCTCTAGACCAAATGATTCAGAGTGGATATTTCGAGAAGCATAACATTCCTATATCTAGGCCGTTGAAAGATGCAGAGGAAAAGATAAGCGCGTTGGAGCCGACGAGAGTGGTGCCAAACGGGAAGTGTTTATCGGACCAGCCCAGGAACGAAAATGTCGCAGTCAGGAAGACTAGGCATTTACCGCAGGTCTTGGCAGCCCTTGCTGTGTCTCTGGCGCCATTCTCAGCTGGTCTCGGTAAGGGCTACAGTTCTCCGGCCATCGCTTCTCTTCAAGGACCTGGAGCCAATGCCACCAGAAGGGATTTCCAGTTGACCGACCAGCAGGCGAGCTGGCTAGCATCACTGTCGTTTCTTGGGGCGCTCTTCGGTGGAATGGCCGGTGGTGCCGCCATGAGGCACGGGAGACGCCGCGTCCTCTCATTAGCAGCAGCGCCCTGCAGTCTATCCTGGTTGCTGACAGTACTGGCTACGTCAGTCAGGATGATGTGCATTACTGCCTTCCTGGGAGGGTTTTGCTGCTCCATACTAACCATGCTATCTCAGGTGTACATCAGTGAAATCTCAGTGCCTGACATAAGAGGATGTCTGAGCGCGGTTTTGAAGATCGTCGGCCATCTTGGAGTACTCTTTAGCTTCACTATAGGAGCGTATTTGGATTGGCAACAATTAGCTCTGTGCATTTCTGCTGCTCCCCTACTACTTTTTTGCACAGTTCTATACATCCCGGAGACCCCCAGCTACCTTGTTCTGATCGGTAAAGACGAAGAAGCTTACAAAAGTCTTCTATGGCTACGAGGTCCTGATTCAGATGTTGCACAGGAGCTAGCCACGATTCGTACTAACGTGCTGGCTAGCAAGAATTTCAGTCAACGCCACCAAATATCCAATGGTCAATTGTTTAGTTCTCTTGACGCTAGGACCATGAATCGGTTGCTTGGGCCCATCATTGTGACCTGCGGTCTGATGATGTTCCAAAGACTGTCTGGAGCCCATGCATTCTCGTTCTACGCTGTACCGATTTTCAGGAAGACATTTGGAGGTATGAACCCACACGGAGCGGCCATTGCTGTGTCCTTTGTCCAATTACTGGCCTCTTGTCTCTCTGGGCTGCTCATCGATACTGTGGGTAGGCTGCCACTGTTAATACTCAGTTCTGTGATGATGTCAATGGCATTAGCCGGCTTCGGGAGTTACGCTTACTATGAAGAGGTCCACCGTAACCAGAGAATACAAAGCGTTATGTTCCATCAGACCGATGGTCAAAACGATTGGATCCCGCTTTTATGCGTTCTGGTGTTCACAATTGCCTTCTCACTAGGAATGAGTCCTATATCATGGTTGTTAATCGGGGAATTATTTCCCCTCGAATACCGGGCATTTGGGAGCGCAATGGCAACAGCTTTTAGCTATCTGTGCGCGTTCGTAGGAGTCAAGACCTTTGTGGATTTCCAACAGGCGCTAGGACTCCATGGGGCATTCTGGTTATACGCATCAATTAGTGTGGGGGGATTGTGTTTTGTGGTCTGTTGCGTGCCGGAGACTAAAGGGAAGGATCTCGATGAAATGGACCCGAATTATGTACAAAGTTTGTCCCCTAAAAGATGTGAACTAGGTATATAA

Protein

MAGSRERLLYERKPDYDSEYYRQRFELHDRESNRNRQEQKPPRYYRPKRTNGYVYEDIYSDFDEAQGRLSLFRPIRPEYLNLPTSYDVKYNSLPRNYFDYDERRRNRKDNYDFRIHNERRNAEYYRKRPREVVSEIRNSKPKNVAVCKPLRFEKNARYWTTDPPERGRTRPKKPDEPKKNVKFSEVSGCNRKMIVDDPIVGRKIVPVRELEVSLDQMIQSGYFEKHNIPISRPLKDAEEKISALEPTRVVPNGKCLSDQPRNENVAVRKTRHLPQVLAALAVSLAPFSAGLGKGYSSPAIASLQGPGANATRRDFQLTDQQASWLASLSFLGALFGGMAGGAAMRHGRRRVLSLAAAPCSLSWLLTVLATSVRMMCITAFLGGFCCSILTMLSQVYISEISVPDIRGCLSAVLKIVGHLGVLFSFTIGAYLDWQQLALCISAAPLLLFCTVLYIPETPSYLVLIGKDEEAYKSLLWLRGPDSDVAQELATIRTNVLASKNFSQRHQISNGQLFSSLDARTMNRLLGPIIVTCGLMMFQRLSGAHAFSFYAVPIFRKTFGGMNPHGAAIAVSFVQLLASCLSGLLIDTVGRLPLLILSSVMMSMALAGFGSYAYYEEVHRNQRIQSVMFHQTDGQNDWIPLLCVLVFTIAFSLGMSPISWLLIGELFPLEYRAFGSAMATAFSYLCAFVGVKTFVDFQQALGLHGAFWLYASISVGGLCFVVCCVPETKGKDLDEMDPNYVQSLSPKRCELGI

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A2W1BFS2 A0A2A4JIX3 A0A0N1PK48 A0A194PZZ5 A0A182F4Q8 A0A182NU56 + More
A0A182J1P4 A0A182QFL9 A0A084VWG3 A0A336LXH8 A0A0N7ZK58 A0A0N8AV33 A0A0P5GJM1 A0A0N8E7Y3

Pubmed

28756777 26354079 24438588

EMBL

KZ150284 PZC71620.1 NWSH01001318 PCG71726.1 KQ459630 KPJ20528.1 + More
KQ459583 KPI98608.1 AXCN02000773 ATLV01017584 KE525174 KFB42307.1 UFQS01000036 UFQT01000036 SSW97972.1 SSX18358.1 GDIP01237473 GDIP01204568 GDIP01121437 GDIP01093679 GDIP01083749 GDIP01079601 LRGB01000311 JAI85928.1 KZS19803.1 GDIQ01239995 JAK11730.1 GDIQ01241535 JAK10190.1 GDIQ01053004 JAN41733.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000069272 UP000075884 UP000075880 + More
UP000075886 UP000030765 UP000076858

Pfam

PF00083 Sugar_tr + More
PF07690 MFS_1

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom
IPR005828   MFS_sugar_transport-like
IPR003663   Sugar/inositol_transpt
IPR011701   MFS

SUPFAM

SSF103473 SSF103473

CDD

cd06174 MFS

ProteinModelPortal

A0A2W1BFS2 A0A2A4JIX3 A0A0N1PK48 A0A194PZZ5 A0A182F4Q8 A0A182NU56 + More
A0A182J1P4 A0A182QFL9 A0A084VWG3 A0A336LXH8 A0A0N7ZK58 A0A0N8AV33 A0A0P5GJM1 A0A0N8E7Y3

PDB

6N3I E-value=1.50943e-25, Score=291

KEGG

101740162 no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0016021 GO:0022857 GO:0016491 GO:0016311 GO:0016791 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259 GO:0055085

Length:

752

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

241.78698

Exp number, first 60 AAs:

0

Total prob of N-in:

0.16793

outside

1 - 321

TMhelix

322 - 344

inside

345 - 350

TMhelix

351 - 370

outside

371 - 374

TMhelix

375 - 397

inside

398 - 408

TMhelix

409 - 431

outside

432 - 440

TMhelix

441 - 463

inside

464 - 523

TMhelix

524 - 546

outside

547 - 565

TMhelix

566 - 585

inside

586 - 591

TMhelix

592 - 614

outside

615 - 636

TMhelix

637 - 659

inside

660 - 671

TMhelix

672 - 694

outside

695 - 698

TMhelix

699 - 721

inside

722 - 752

Pi

204.523933

Theta

153.982713

Tajima's D

0.982291

CLR

0.522704

CSRT

0.664966751662417

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree