Silkworm Genome Informatics Database

Gene

KWMTBOMO16182

Pre Gene Modal

BGIBMGA013959

Annotation

PREDICTED:_uncharacterized_protein_LOC101743147_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr28(+):723127-728271 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 4.065

CDS

ATGCCAACTGTTACAGAAACTTCAAGGAAAAAAGCGCAACCTATAATGGCATCGGATCAAGAGTCTTGTTCGGACGAGGAGCCTGACAGTGAGATGCTGAGTGACGACCTGTGTCTCCCCGACAGCGATGATGACAGCAGACAGCCGAGAACAATACAGAATATTTCGGAAGAGCTGTCAAATCTGAACCCTTGCTTGCTGCGACCGCCACGGAAACTCTTCACAAACTGCAGAGAGCGCTGGAGGCAGCAGAACGTTAGTGGTGCGTTTGCGGAGCTTCGGAGACTGGTGCCCACTCATCCACCAGATAAGAAGCTATCGAAGAACGAAATACTCCGGATGGCTATCAGGTACATAGGACTTCTTTGCGAGGTCCTGGAATGGCAGAAGAACCACAGCGTCACCAATAAGGAGAATTCCGGTAGCTTGGCGATCAAATGTGAATCTCCGCTGAGTCCTCAATCCAGAAGACTTCGATTAAAACGGCAGTGTTTTGACGAAGACGGTCCAAGAGCCAAACTGTACCACGATCAAGAAGAGTATTTCCGGTACGGCAACGAAGAAAATCAGGAGATGTTAAGAGGAAAGGGCTTGGGAAGACCAGATTTGTATTTCGGGAAGGAACACCTTAGGGTGTTGAGACACCAGTATTACTATTCGCCGAGGTGGAGACAGACATACCCGTTCAGAAGTCTGGCCGATCGCAACGGGAATAACTTGCTGATGATCGCTCCCCTCCAGAATGGGGGGAAAGAAGATGTAAAGCCGAACGGTTGTAAAGAGAACGAGAAAGAAGATAACAAGTAG

Protein

MPTVTETSRKKAQPIMASDQESCSDEEPDSEMLSDDLCLPDSDDDSRQPRTIQNISEELSNLNPCLLRPPRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHSVTNKENSGSLAIKCESPLSPQSRRLRLKRQCFDEDGPRAKLYHDQEEYFRYGNEENQEMLRGKGLGRPDLYFGKEHLRVLRHQYYYSPRWRQTYPFRSLADRNGNNLLMIAPLQNGGKEDVKPNGCKENEKEDNK

Uniprot

H9JWP5 A0A2A4K9P6 A0A2H1VC92 A0A2A4K9A6 A0A2W1B4W8 A0A212F9W5 + More
A0A0N1PJH9 A0A194Q5C9 E2BNU3 A0A0L7R474 A0A151IH65

Pubmed

19121390 28756777 22118469 26354079 20798317

EMBL

BABH01018378 NWSH01000031 PCG80503.1 ODYU01001761 SOQ38406.1 PCG80504.1 + More
KZ150418 PZC70938.1 AGBW02009550 OWR50535.1 KQ459764 KPJ20093.1 KQ459583 KPI98600.1 GL449507 EFN82626.1 KQ414658 KOC65648.1 KQ977636 KYN01148.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000053240 UP000053268 UP000008237 + More
UP000053825 UP000078542

PRIDE

H9JWP5

Pfam

PF00010   HLH        + More
PF00160   Pro_isomerase
PF16040   DUF4792
PF16041   DUF4793

Interpro

IPR036638   HLH_DNA-bd_sf        + More
IPR011598   bHLH_dom
IPR040238   TAL-like
IPR002130   Cyclophilin-type_PPIase_dom
IPR032008   DUF4792
IPR032010   DUF4793
IPR020892   Cyclophilin-type_PPIase_CS
IPR029000   Cyclophilin-like_dom_sf

SUPFAM

SSF47459 SSF47459 + More
SSF50891 SSF50891

Gene 3D

4.10.280.10 2.40.100.10

CDD

cd00083 HLH

ProteinModelPortal

H9JWP5 A0A2A4K9P6 A0A2H1VC92 A0A2A4K9A6 A0A2W1B4W8 A0A212F9W5 + More
A0A0N1PJH9 A0A194Q5C9 E2BNU3 A0A0L7R474 A0A151IH65

PDB

2YPB E-value=1.12643e-17, Score=218

KEGG

101743147 K09068 T-cell acute lymphocytic leukemia protein | (RefSeq) uncharacterized LOC101743147

GO

GO:0046983 GO:0003755 GO:0006457 GO:0003676 GO:0016491 GO:0016311 GO:0016791 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

PANTHER

PTHR13864

Length:

268

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00083

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13070

outside

1 - 268

Pi

309.910351

Theta

171.550097

Tajima's D

2.352559

CLR

1.814146

CSRT

0.930603469826509

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics