Gene
KWMTBOMO16177
Pre Gene Modal
BGIBMGA013934
Annotation
PREDICTED:_probable_phytanoyl-CoA_dioxygenase_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 4.393
Sequence
CDS
ATGAATTACAAAAGGATTTCACCGAAATATGTATCATCAGCAGAATATAAGCTGACGAAACAACAAAAACAGTTTTATGAGGAGAATGGCTACTTGTTATTCAGAAACCTGTTCGAATCGACCAGCTTAGACCGTTACAGGAAAAGATTTTCCGAATTATGTCATCAACCAGAAAAGGTAACGATTATCAAGGAGAACTCTTTAGTTAGCGCCAAGAAGACTCCTGAAGAATACGTTTACAAGATTCAGGATATAATAAACGATGAGGTCTACATGTCGTACAGCGAAGACTCCAGAGTACTGGATATAGTTTCTCAGCTGATCGGCGATGACATCTCCGCCGTCAATCTGATGCTGATCAACAAGCCGCCGGAGTCGACCAGACACCCCGCCCATCAGGATCAGTGGTATTTCCCTTTCGGGCCAACAGACAAGATCATAGCGATGTGGACGGCTCTGGATCCGGCGAACTTACAGAATGGGTGTCTGTACATTGTGCCGGGCTCGCACAAGTGCGGAAAACTGTTTAAGCACGTAACATTTAAGAATTCAAAGAAGTTCTTTCACGTTATCGCTGACGAGGACCAGCTGGCTCCGTTGAGCAACCGACTCTATTTGGAGATGTCTCCGGGAGACACGGTCTTCTTCCATCCCTACCTGATACATGGCTCCGGTCCTAACGATACCAAGGACTACAGGAAGGCGTTGACCATCCACTACGCCAACAGTGCGTGTCACTACGTCGACCTGCGGGGCACCGTGCAAGAGGAATTGAGCACAGGAAAAAAAGTACAAGCATATAACACGAGAAGAAATAAAACAAACGGAGGTAATGTAAGCAATTATGAAGAAAACATTGACAAAATCCTGCCGTGTCTAAAAGAAAGAATCAAAATACAAAGAATATTTAAGGAACAATTTGCAAAAAAAGGTACGGCAATATGCGTAGCTTCAACCAGCAATACAGTTCACGTTAGCGCCGAACATCGACGTGAAAATAGTACTATAAGTAGTGCCGTTTTTGATAATGATATCAATCACGTAGTTACCGAAAAGAGTGATATTATTGATACCACAGATAGTCCTGAAAGTTGTGTAAACACCGAAGAAGATCAAAGAACATCTTTTAATGTGCCGGAAAGTGATGACGATGCTGACTTTTGTGATTCAAGCGATAACCTTTATGTACCAGAAACCACTGACGAATCTGATAATGACTCTGATATTTGTGATGTAACCTCAGCTACCAGCAACTCTAAGCAGAACCATCAAGTTTCATTTGAAATTCACGATGAAGCTACCGAAAACAAACAAACTGAATGTCTTTCTACCGAAGAAAAGGAAGGCGATAAAAAGAAGAGGATACGACAAAGGGATTATTGTTTTTATTGTGAAAGTTTAATTTTAAATTTCGCTAGACACGTTATAAGAAACCATTCTAATGAACCGGAAGTTCAAAAGGGAAAAGAGGGAGAGGGGTTCCAGTTTTATTTAGCAAAGATGTTCAAAAAGATATAG
Protein
MNYKRISPKYVSSAEYKLTKQQKQFYEENGYLLFRNLFESTSLDRYRKRFSELCHQPEKVTIIKENSLVSAKKTPEEYVYKIQDIINDEVYMSYSEDSRVLDIVSQLIGDDISAVNLMLINKPPESTRHPAHQDQWYFPFGPTDKIIAMWTALDPANLQNGCLYIVPGSHKCGKLFKHVTFKNSKKFFHVIADEDQLAPLSNRLYLEMSPGDTVFFHPYLIHGSGPNDTKDYRKALTIHYANSACHYVDLRGTVQEELSTGKKVQAYNTRRNKTNGGNVSNYEENIDKILPCLKERIKIQRIFKEQFAKKGTAICVASTSNTVHVSAEHRRENSTISSAVFDNDINHVVTEKSDIIDTTDSPESCVNTEEDQRTSFNVPESDDDADFCDSSDNLYVPETTDESDNDSDICDVTSATSNSKQNHQVSFEIHDEATENKQTECLSTEEKEGDKKKRIRQRDYCFYCESLILNFARHVIRNHSNEPEVQKGKEGEGFQFYLAKMFKKI
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF05721 PhyH
Interpro
IPR008775
Phytyl_CoA_dOase
ProteinModelPortal
PDB
2A1X
E-value=5.77238e-50,
Score=500
Ontologies
GO
Topology
Length:
505
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0119
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.02120
outside
1 - 505
Population Genetic Test Statistics
Pi
306.554982
Theta
180.77931
Tajima's D
2.064808
CLR
0.012682
CSRT
0.893955302234888
Interpretation
Uncertain
