Silkworm Genome Informatics Database

Gene

KWMTBOMO16176

Pre Gene Modal

BGIBMGA013957

Annotation

PREDICTED:_uncharacterized_protein_LOC101739898_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr28(+):519667-578079 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.863

CDS

ATGGCGTGCAAATTGGTGTTACTGTTGTGTTTTAGCGGCGTAGCGGTTGTGTTAGGACACGTCGCGCTCACGTACCCGCCGGCAAGGAAATACGATCTAGATTTCTTGGATAATTCCCGAACGAAGCCGCCATGTGGAATGCCGAGAGGAAGTATAAAAACTTCATTTTTGGCGGGATCAACTTTTACAGTTCATTGGCATTTGGCGTATGCTCATCGAGGTGGTTTTAGCTTGAGGATACTGGACGAGCTGGAGAGGCCTCTGTTGGATTTGACGCCTCGCGCTGGCGGCGTCGAGTTTGTTAGAGATGATTCTACGGCTCAGAAATATGAAGTGAGACTGCCTAGCGACTTCACGTGCGTGAACTGCACGCTTCAGCTACAGCGGGAGGCCGGCGAGTGGGGAGCCAACTACAGGTTCTGGTCGTGTGCGGACATCGACATCGTCCAGCGCAAGCAGTTCCAGGAGACGTGCTCGGGACACGGGTTCCACATCCTGGGCCGCTGCAAGTGCCACAAGGCGTACAGCGGCGCGCGCTGTCAGTTCGCCGATGAGTGCGCGGAGGACGCCGACTGCGGCCTGCGCGGGGCCTGTCTGCGGCTCGACTCGACCGCGGCCCCCCACAGGATGTGCTACTGCCCCTACGGCTTCTACGGGAAGGGGTGCAACAAGAAAGCGCCGTGGAAAGACAAGAACGTCAACCTGGAGCTGTACAGTAAGAAGGAACTGTCGAAAGAATTCAATCTCTACTGGAGGATACTGAAGCACGAAGCAGAGATAGAGTTCGTCATGGTGGTTAACGGGACTTCTTACGCGGGTTTGGGTTGGCGGCCGAGCGGCTTGACGAAGCAGTGCAAGAATTTCCCAGTCCTAGGACCACCCAGTGACGTGAAACCCAGCACGCCGAATCCAGAACCACTTCCCGAGCCGGAACCGAAAGCCGAATCGGTGCCCGAACCGGAGCCCGAACCGGAGCCGAAGCCGGAACCGGAGCCAACGAAGCCAGGACCGGAGTTTGAGCCGACAACGCAAGCGGCGGAGTTCGACCGGAACAAGCGCGTGGCCATGCACACCGCCGACGGACTCGACTTCAAAACGTTAGGCAGTGACGTCACCGTCAAAACCAGCGTCTCGTACCAAGTGTCCAGTTCTAAAGGTCGCAAAAGACGAGCCATCACCGAACCAACGAATGTTGAAGTATCGTCTGTTAAGACAAGTACCGAACAAAATTTTAAACCAAAGTCATTGCCAAAGTATAAGCTTAAAAATCAGCCCATTCCGCAGTCATCCCGGTCACGGTCATATCCTGTACCCGAATCCACTCCTGAGCCTACCGCTGAGCCAACGGCGGAACCTGAGCCTACCTCAGAATCTGAAACAACTTTTGAACCCAATTCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAACCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAACCAGAGCCCACTCCTGACCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAGTCAACTTCTGAACCCAAATCTGAGCCAGAACCCTCTTCTGAACTCAAATCCGGGTCAGAACCAACTACTGAACCCAAATTTCAACCAGAGCCCACATCTGAACCAGAACCTGAACCCACGTCTTCGCCAAAACTTAATCCCGAACCAAAATCCGAGCCAGAGCCTATACACGGCCTGAAATCTGTACTCGAACAGACCAGAGAACCAAAATCCGAACCCGAACCGATTCCAGAACCTAAATCTGAACCCGAACCTACTCCTGAACCTAAATCCGAGCCAGAACCTACTCCTGAGCCAAAATCCGAGCCAGAGCCCACTCCTGAGCCAAAATCCGAGCCAGAACCTACTGCCGAACCTAAACCTGAACCTGAGCCATCTTCCGAACCCAACGCTGATCCGGCCTCAGAGACTTTGCTAGTAAAGGGACTTAAAGAAGAAGCAGGTTATTTCCCAGAACACGAGTTTGTACCTAAATTCGATTTCAATCCTATGGACTGCACTGACATAGTTATCGGTACAGCCAGAGGGAATTATCACAGGATAATGGACTATTACACGAGAGATAGGTCAACGCCTCGAGTAGACACATTGTGGGGAGGTCACGACGACATCACGGCAGCTTCAGGGTACGAAGAGAATGGAGTCACCACAATCCTATTCAGAAAGAAGATAAAGGCGAAGGAACCAACGGACCATTCTATAGTGGACGACATTATGCACGTCATCTGGGCCCGGGGTCAAGAGCCGGGTAAATACGTGCACTCGCCCGGCTCGGGGATCGAACAGGGGACGGCGGTCACTCAGGACTTCTACCGACCCGATGAGCTCAAGTACCACGGTCACGGAGACCAGCGTAGCTTCCTGGGGATGAATTTCTTTGAGGAGACAAAGAGCTCAGTGTCGGGAGGGATCTTGCCTCTCGGCGACAAGTGCGGCGGCCAGTGGCGGCTGCCGCTTGACTGCGACCCCGACAACGGCACGTGCACGTACTTCGCGTCGTGGGAGTACCTCGGCCTGAAGAGAGGGAAGGACTCCGTCAGGTTCACCATCAAAACGAAGAACACCAAGCAATGGACCGGCATCGGATTCAGCCATAACAAAAAGATGTCGCAGTCGGATGTGATAGTGGGTGGGCTGGACCCGCGGTCCAGCGTGCCGTGGGTGCAGGACGCCTGGGCGCGCGGGTACGGCGCACCCCGGCCCGACTCCCGCGGTGACGTCACGTCGCTCACCGGCTCGGTGGCGGACGGAGTCGCCACCCTCAGCTTCGTCAGGAAGCGCGACACCAAGGACCAGGAGGACCTGGCGTTCACGGACACCCAATGCCTGTATCTGATGTTTGTGGTGCAAGGTGGTAACTTTGATCCTGTCAGCAAGAAGATCAGCAAGCATCTCCAAACCCCCATAGTCACAGAAGAAAAAGTCTGCATTAGACCTTGTGGACCTGAACCAGTAGAAGAAGAGTCGACAACGGAGGCGGTGCTCCCCGGACAGAAGACGTACACGCTGCTGGTCCGGCTCACGGGCCTGGCGGAGAGCTTCCGCAGCCCGGCGCCCGGCAGCCAGGAGTACGTGGACCTCAGCAAACAGCTGGTGGACGGGCTCGGCTCGCAGCTCAAAAATAATAAAGGCTATCAGGGATTAACATTAAATGGTCTCATACAAAACGAAACACAATCGATAATAGCCGAGCTCACGCTGAAGTCGATAGACTCGAACTTGATACCCGGCTCTAGCGGGCGGGCGCTCGGCCCGGACGTCTCGCTCTCGCACAACGCGACGGAGGGGGACGGCGAGATGTCGCGGTGGGAGCGCGCGGTGCGGGACACGCTCGCGCGGGGGCAGGTCGGCAACCTCAACTTCGATCCCGAGTTTCTGGTGTTCGAACCTCAGAGCCTGGTGTCGGAGCGCCCCGAAGAGCCCGTGGTGGCCGTGGTGGGGTGGGTGTGGTCGCGGTGGGTGGTGGTGGGCTGCGCGGTCGGGCTGCTGGTGGCCGCGCTGCTGCCGGTGCTGGCCGCGCTCTGCCGCCCGAGACCGGCGCCGGATCGCTTGATCCCGAGCTCGGCGTGGAAGGACTACTCGACGAACACGAATTACGCCTTCGAACCGTTTGAAAACGACGAGAAGTACAAAACGTCTACCATCAGCCGAACCCGGACCCTCAGGCCCACCGAGCCGCCGCCGCCGCGACCCGCCTCCACCAACGGGACCAAGGCGCCCAGCAACGACACCAACGCGAGGGCGGTCGGCAGTGGGACCATGACCAGGTCCACTAGTGGAAACGAGCAGCGACTGGCCACCATCGGACACCCCAGGCTGGTCAACGGCAACACTACCGCTCCGAGAAGCAGCGGCAACCCCGCGGGGAGGGGCAGGAGCAGCGCGGAGCAGTACTACCACGACACCAGATCCCTGCAGCGGCCCAGACAATACACATATTCAAATCGGCCCGAGCACTCATCGTATTCCCTGCCTCGCGGCACGGCGCCGGCAGCCAGGGACTCGCTGTCCGCGCATCCAGACTTCTACTTCATGCCGTCCCAGAGGAAATACGAAGATTTCTGA

Protein

MACKLVLLLCFSGVAVVLGHVALTYPPARKYDLDFLDNSRTKPPCGMPRGSIKTSFLAGSTFTVHWHLAYAHRGGFSLRILDELERPLLDLTPRAGGVEFVRDDSTAQKYEVRLPSDFTCVNCTLQLQREAGEWGANYRFWSCADIDIVQRKQFQETCSGHGFHILGRCKCHKAYSGARCQFADECAEDADCGLRGACLRLDSTAAPHRMCYCPYGFYGKGCNKKAPWKDKNVNLELYSKKELSKEFNLYWRILKHEAEIEFVMVVNGTSYAGLGWRPSGLTKQCKNFPVLGPPSDVKPSTPNPEPLPEPEPKAESVPEPEPEPEPKPEPEPTKPGPEFEPTTQAAEFDRNKRVAMHTADGLDFKTLGSDVTVKTSVSYQVSSSKGRKRRAITEPTNVEVSSVKTSTEQNFKPKSLPKYKLKNQPIPQSSRSRSYPVPESTPEPTAEPTAEPEPTSESETTFEPNSEPEPTPEPKSEPEPTPEPKSEPEPTPEPKSEPEPTPEPKSEPEPTPDPKSEPEPTPEPKSEPEPTPEPKSEPEPTPEPKSEPEPTPEPKSEPESTSEPKSEPEPSSELKSGSEPTTEPKFQPEPTSEPEPEPTSSPKLNPEPKSEPEPIHGLKSVLEQTREPKSEPEPIPEPKSEPEPTPEPKSEPEPTPEPKSEPEPTPEPKSEPEPTAEPKPEPEPSSEPNADPASETLLVKGLKEEAGYFPEHEFVPKFDFNPMDCTDIVIGTARGNYHRIMDYYTRDRSTPRVDTLWGGHDDITAASGYEENGVTTILFRKKIKAKEPTDHSIVDDIMHVIWARGQEPGKYVHSPGSGIEQGTAVTQDFYRPDELKYHGHGDQRSFLGMNFFEETKSSVSGGILPLGDKCGGQWRLPLDCDPDNGTCTYFASWEYLGLKRGKDSVRFTIKTKNTKQWTGIGFSHNKKMSQSDVIVGGLDPRSSVPWVQDAWARGYGAPRPDSRGDVTSLTGSVADGVATLSFVRKRDTKDQEDLAFTDTQCLYLMFVVQGGNFDPVSKKISKHLQTPIVTEEKVCIRPCGPEPVEEESTTEAVLPGQKTYTLLVRLTGLAESFRSPAPGSQEYVDLSKQLVDGLGSQLKNNKGYQGLTLNGLIQNETQSIIAELTLKSIDSNLIPGSSGRALGPDVSLSHNATEGDGEMSRWERAVRDTLARGQVGNLNFDPEFLVFEPQSLVSERPEEPVVAVVGWVWSRWVVVGCAVGLLVAALLPVLAALCRPRPAPDRLIPSSAWKDYSTNTNYAFEPFENDEKYKTSTISRTRTLRPTEPPPPRPASTNGTKAPSNDTNARAVGSGTMTRSTSGNEQRLATIGHPRLVNGNTTAPRSSGNPAGRGRSSAEQYYHDTRSLQRPRQYTYSNRPEHSSYSLPRGTAPAARDSLSAHPDFYFMPSQRKYEDF

Uniprot

NA

ProteinModelPortal

NA

PDB

4XBM E-value=0.00289835, Score=101

KEGG

101739898 no KO assigned | (RefSeq) uncharacterized LOC101739898

GO

GO:0005515 GO:0003676 GO:0016491 GO:0016311 GO:0016791 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

SignalP

Position: 1 - 19, Likelihood: 0.922447

Length:

1413

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

38.67643

Exp number, first 60 AAs:

21.16797

Total prob of N-in:

0.98751

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 1211

TMhelix

1212 - 1234

inside

1235 - 1413

Pi

250.172443

Theta

169.800747

Tajima's D

1.551088

CLR

0.109524

CSRT

0.795810209489526

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics