SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16174
Annotation
PREDICTED:_sorting_nexin-15_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.603
 

Sequence

CDS
ATGTCGAAGGATAAGTGGGTTCGCCGGTTTTCAGTTGATGAAACATCGAAACACAATAATGGATTCACTATATATAAGATCATGTCTATTCTGTTCCCGATAGAATCGCCGGAGGCCGTGACGGCGATATCTGTATGGAAACGTTACAGCGACATCCAGAGGCTGCACAAGAGCATGAAGTCGCTGCACGCGGGCCTGCACTTACGCGGCACGTTCCCCGCCCTGCCCCGGTACAGCTATTTCAGGAGGTTTCAGCCGGACGTGATAACCGACAGAGCTAGAACCATCAAGACGTTGTTAGAGTTCATCGCGGAGCACAGACTGCTGTTCACTAGCACTGACTTCGTCAATTTCCTTCAGACCGGATACCCAGAGCCCTGCGCTGAGCCGGGAGTCATAAACTCTATAAGGTCGTCCTTGCACCTGCCCATAGAGGAAACGCCGCCGCTGGAGTACCCGACTGACGACGACGAGGCCAGGACCCCCAATGGCTCAATAAATCCGACGGCTTCTCAACAAGTATCGCGCGACGAAACCGATTTTATATCGCAAATACCGATTTACGAAGCGGCTGACGTGGAGGTGGCGGACTTGAGCGAGGCCTCCAAGCGGACGGGCAGCTTGGACTCGCTGGACTCGTTGGAGAGCATAGACAGCGACCTCTTTGACGAGCTGGCCAAGCTCACCATAGACAAGCCGGCGTCCAGTGTCAAGAGGAACGTGTTGCCAGATTTGATTAATTTCGACGAACCTTCCACATCAAAGATCGACGATTGTCACACGACGAGAACTGGCAACACCGACTCGGACAGTTTGTCTTTGAATGCGCAGACTTTTGCAGACAGTGCCCTGTCCCCCTCGCACGCGGGGCGCGGGACGAGGACGGAGGACAGCTACATATTCGAGGCGGGCTACATGCTGAACTTGGCGGCGCGGTGCGAGGACGCGGGGGACTACGCGGGCGCCCTGGACCACTACAAGGCCGGCATCGAGAAGCTACTCGTCGGCGCCCGCTCGGACGCGGACGGCGCGCGGCGGGCGCTGGTCCGGCAGCGCACGCACGCCTACCTGGCGCACGCAGAGCGACTGTGCAGCGCGCGCACACAGCACGTCGCGGGTGGAGTGGCGCGCGGCGTGGCGGAGCGCGGCGGGGCGGCGCGGGACGGCGCGGCGCGGAGCGGGTCGCGTGCGGAGCTGTGCGCGTACGTGCTGCTGGGCGTGGTGCGGCCGCGGCTGCTGCTGGTGCTGCACGCCAGCACCGACACGTGCTACGTCATGAAGGTGCTGGACAAGGTGCCGAGCAACGAGCCGGAGGGGGAGTGGCGGCGCCCCGTGCTGCCCGGGCCGGCGCCCTACATGGTGCGGCTGCACGCGCTCATCGAGACGGAGGACTCGCTGTTCCTGGTGCTGACGTACGCGCCGGGCGAGCGCCTGTGCGAGTACGTGCGCCGGTACGCCGCCGCGCCCGCCGCCAAGCCGCGCCCGCCCGACCTGCGCTGCGTGCTCGCCGACCGCGCCGCGCCGGGGGACGACGTGCGCGACCTGCTGCACAACTCCAAGGAGCTGCTGCTGACCGTGGACCGGGCGCTGGGCGGCGGCGCGCAGACAACTACCCCGGACGAGCACACCACGGCCGCTGGCACCGGGTTGGAGCCGCGCATGCGGTACCGGGACGCGGTGCCGCCGGGCGCGGTGCGGCGCTGGGCCGCGGAGCTGGTGACCGCGCTGGAGAGTCTGCACGCGGCCGGCGTGGTGTGCGTGTGGGTACCTGCTCTCTACACCGGCACCGCAGTACTGCTAGTGCACTGGACGGTGCATTGTCCAGACGCGCACAGCTAG
Protein
MSKDKWVRRFSVDETSKHNNGFTIYKIMSILFPIESPEAVTAISVWKRYSDIQRLHKSMKSLHAGLHLRGTFPALPRYSYFRRFQPDVITDRARTIKTLLEFIAEHRLLFTSTDFVNFLQTGYPEPCAEPGVINSIRSSLHLPIEETPPLEYPTDDDEARTPNGSINPTASQQVSRDETDFISQIPIYEAADVEVADLSEASKRTGSLDSLDSLESIDSDLFDELAKLTIDKPASSVKRNVLPDLINFDEPSTSKIDDCHTTRTGNTDSDSLSLNAQTFADSALSPSHAGRGTRTEDSYIFEAGYMLNLAARCEDAGDYAGALDHYKAGIEKLLVGARSDADGARRALVRQRTHAYLAHAERLCSARTQHVAGGVARGVAERGGAARDGAARSGSRAELCAYVLLGVVRPRLLLVLHASTDTCYVMKVLDKVPSNEPEGEWRRPVLPGPAPYMVRLHALIETEDSLFLVLTYAPGERLCEYVRRYAAAPAAKPRPPDLRCVLADRAAPGDDVRDLLHNSKELLLTVDRALGGGAQTTTPDEHTTAAGTGLEPRMRYRDAVPPGAVRRWAAELVTALESLHAAGVVCVWVPALYTGTAVLLVHWTVHCPDAHS

Summary

Pfam
PF00787   PX        + More
PF00069   Pkinase
PF04212   MIT
Interpro
IPR011009   Kinase-like_dom_sf        + More
IPR036181   MIT_dom_sf       
IPR036871   PX_dom_sf       
IPR000719   Prot_kinase_dom       
IPR001683   Phox       
IPR007330   MIT       
SUPFAM
SSF64268   SSF64268        + More
SSF56112   SSF56112       
SSF116846   SSF116846       
Gene 3D
PDB
6MBI     E-value=3.50084e-14,     Score=192

Ontologies

Topology

Length:
612
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.47589
Exp number, first 60 AAs:
0.3737
Total prob of N-in:
0.05085
outside
1  -  612
 
 

Population Genetic Test Statistics

Pi
31.184735
Theta
181.561583
Tajima's D
2.057372
CLR
1.138083
CSRT
0.890855457227139
Interpretation
Uncertain
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