SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16172
Pre Gene Modal
BGIBMGA013936
Annotation
testis_specific_tektin_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.322
 

Sequence

CDS
ATGACGACCGAAGACCCCAGCAAAACATGCCCATATATTTGTCCAACAACGATAAAACCAGCAGGAGAGACTATATCTTATCTGGAAGCTGGAATGTCGCGAGGTCCAGAAAACCCACACGCTTCTCCTTACGTCCCTGGCTTGATACAACCTCCTGAGAAAAAGATTTATCCTCCAGGAGCACCGCCAAGGTATCTACCGCAGCCTACAGATTCTACCAGTGGGGATATTCTAGGCATGGGCCCAATTGGACCTTGGGCTCCAGGACACATCGACTGGACGCCACACGCGGGAACAACAGGCGTTCGACCTGTGGTAGACAAATACTCTATTACTAGATATTCAACAGGCGAGTGGAGGAAGAACAATGAATATGTTTTAACTCCAAGAGCGACGGATAAAGCTAGAAACTGGGAAACGACCACAAAAAAAGATCTAGCGAATGCTTTCTCTGGAATGGATAACAAATTGGCAGACGTCAATAACAAATTAGAAAAACGAGTTAAAGATTTGAGCCACTGGAAGAGAGAAGTGGAAAAAGCAGTTCTAGCTATTACTGATGAAATAAACGTGTTAGATCAGGATAGAGGTAGACTTAAAGGTGCTTGTAGGATCTTGATGCTTCCTGAAGCTATTTCTAGAGAATGCCTAGAGCTTAGGACCAATAGATATGAACCAGATTTAGTAAGAGATGATGCTGAACAAGAGTTAATCAAAGAAGTGGCTATAGTTGGAGAAATAAGGCGAGTGTTCATGGATACTTTAGCCAAAGTTGAGGAACAAATGTCTATGAACAAAGCGGCTAAAGCAAGCATTGAATTTGATTGGAGCGACAAAATGGTTTCCTTGAAATTGGATACGCAGAATTTGAAATTGTCACCAGATTCGAATTTACTATTATGGCACCCTGGTGTCGCCCGGTGGCCAGAAAACGCCACAACCTTAGAATATTGGGAGCATTTCTGTAGTGAAAGCATCAGAAACTGCGAGGAAGTTCGACAGAAATCGAAAAATTTACGAGGTGATCTCATGACTGCGATCGTCAAAGGCTCTCAAGACATGAAGATTCAAGCCGAGAGAACCAATGCAGCACTCGCCGAAACTGTGTCTGCTACCGAAGAACTATGCGAAAAGTTAGAAGAAACTTTAAAAATAAACTTACAGCAACTTGCACATATAGAGAATCTGATAGATGAACTTAAAGATTCTTTAAGGAAGGTAGACGAAAGAAATAAATTGGTGATGACGAGGCTACATGCTAGGAACTATGACCGTCCCAATGTCGAAAACTGCAGAGACGAGGCCCAATATGCTCTGATGGCTGAAGCTAAGTTTGTAAGAGAAACATGTGAGTCTCTATCTGGGAAACTGCGAGAGGCCGAGATCATTAGATCGGATTTGATGAAGTACAGGGGTGAATTGGAAAAGCAGATCGCTTGTAAAAGGAAAAGTTTGAATATTGATCTAGACAGGTGCGCCAGAGTTAGAGCTCACATGCCCACTCCTGAAGAATTTGCAGCCGGATGA
Protein
MTTEDPSKTCPYICPTTIKPAGETISYLEAGMSRGPENPHASPYVPGLIQPPEKKIYPPGAPPRYLPQPTDSTSGDILGMGPIGPWAPGHIDWTPHAGTTGVRPVVDKYSITRYSTGEWRKNNEYVLTPRATDKARNWETTTKKDLANAFSGMDNKLADVNNKLEKRVKDLSHWKREVEKAVLAITDEINVLDQDRGRLKGACRILMLPEAISRECLELRTNRYEPDLVRDDAEQELIKEVAIVGEIRRVFMDTLAKVEEQMSMNKAAKASIEFDWSDKMVSLKLDTQNLKLSPDSNLLLWHPGVARWPENATTLEYWEHFCSESIRNCEEVRQKSKNLRGDLMTAIVKGSQDMKIQAERTNAALAETVSATEELCEKLEETLKINLQQLAHIENLIDELKDSLRKVDERNKLVMTRLHARNYDRPNVENCRDEAQYALMAEAKFVRETCESLSGKLREAEIIRSDLMKYRGELEKQIACKRKSLNIDLDRCARVRAHMPTPEEFAAG

Summary

Interpro
IPR000435   Tektin       

Ontologies

GO

Topology

Length:
508
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00054
Exp number, first 60 AAs:
0.0004
Total prob of N-in:
0.00551
outside
1  -  508
 
 

Population Genetic Test Statistics

Pi
179.411746
Theta
179.200546
Tajima's D
0.142211
CLR
0.15695
CSRT
0.408529573521324
Interpretation
Uncertain
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