Gene

KWMTBOMO16171

Pre Gene Modal

BGIBMGA013937

Annotation

PREDICTED:_lipoma_HMGIC_fusion_partner-like_3_protein_[Bombyx_mori]

Location

Bomo_Chr28(-):464185-472026      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.286 PlasmaMembrane   Reliability : 1.75

CDS

ATGCTTCGTCAAAAAGTACAATACATACTTTCAGCTGCAAGCGTCGTCATAACTCTGAGTCTGGTCGGCGGAGTGGCGGTGTACCCGGCCGGCTGGAACGAGACCTCAGTCCAGGAGACGTGCGGCCCCACAGCCGACCAATATAAACTAGGTGGCTGCCACATACGCTGGGCGTACATCTTGGCCGCGATAGGGTGTCTAGACGGCGCGGTGCTGTCTGCGCTCGCCTTCATCCTGGCCACGCGGCACGTGCGGCTGCGACCCGACGCCGGGTACCCGCCGCCGTCGCTATACAAAGGTGAGGTGAACAACGGCTACGTGACGGACGCGACATCTGTTAGCGGCTCTAGGAAGTCTCTGGCGCTGCAGCCCGTGCTCATCATGCACCCGCACGCGCCCATGGACATGGACACGTACTCTCACTACTCAGGACGCACCGCGCGATCCAAACACGGAATGTACGCGAACACTATGCATAATTATCAATTATAA

Protein

MLRQKVQYILSAASVVITLSLVGGVAVYPAGWNETSVQETCGPTADQYKLGGCHIRWAYILAAIGCLDGAVLSALAFILATRHVRLRPDAGYPPPSLYKGEVNNGYVTDATSVSGSRKSLALQPVLIMHPHAPMDMDTYSHYSGRTARSKHGMYANTMHNYQL

Uniprot

H9JWM3   A0A2H1WLU3   A0A2W1BAB6   A0A437B419   A0A2A4K8V8   S4PY30   + More
A0A0N1IQD3   A0A194PZ34   I4DR84   I4DJM9   A0A212EWM5   A0A0L7LKZ8   A0A2J7Q9H2   A0A0V0G8J7   A0A0P4VPE7   A0A069DYH0   A0A1Y1LS63   A0A067RJL6   D6WPM0   A0A2R7X6U8   A0A1B6C8B7   A0A1B6LDF8   A0A1B0FJ69   A0A1A9ZMT0   A0A0A9XPG6   A0A1A9W4L8   A0A146MCC5   A0A1A9UXU7   A0A1B6JEZ0   A0A0L0CKE4   A0A1A9XBJ4   A0A1B0BAC6   A0A1I8N0P7   J3JYY7   A0A023F344   W8BXG3   A0A0A1WNB7   A0A2P8Z492   A0A034VTF9   A0A1B0GM04   A0A0K8TZ73   A0A2H8U0L5   A0A1B0CP82   A0A1S3D269   J9JJ24   A0A1L8D9H4   A0A2S2PNW7   A0A1L8D9E4   A0A1W4XQZ3   A0A336M2F8   A0A182JKB5   B4MXH2   A0A0M3QW20   E0VQQ3   B4GS36   B4KWW5   B4IWQ3   B4LH07   B3M784   A0A3B0JUZ4   Q2M056   A0A182FE58   A0A1W4VVH9   A0A2R5LM32   B4PE89   B3NEX5   Q178A0   A0A023EMD6   Q9W068   B4HW25   B4QN04   B0X8Z6   B7P3U6   W5JTW0   A0A087TVG2   A0A084WDL8   A0A2P6KRE9   A0A443SPZ7   A0A2M3ZBD3   A0A2M4BX53   A0A2M4CSD7   A0A2M4AT92   A0A087U3B4   A0A1B6HK69   U5ETD1   A0A0K8VVW8   A0A0A1WNT4   W8BLY2   A0A034VW39   A0A0K8VGI5   A0A443RBI5   A0A0K2U772  

Pubmed

19121390    28756777    23622113    26354079    22651552    22118469    + More
26227816    27129103    26334808    28004739    24845553    18362917    19820115    25401762    26823975    26108605    25315136    22516182    23537049    25474469    24495485    25830018    29403074    25348373    17994087    20566863    18057021    15632085    17550304    17510324    24945155    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    20920257    23761445    24438588   

EMBL

BABH01018358    BABH01018359    ODYU01009507    SOQ53998.1    KZ150184    PZC72469.1    + More
RSAL01000177    RVE45014.1    NWSH01000031    PCG80509.1    GAIX01004003    JAA88557.1    KQ459764    KPJ20102.1    KQ459583    KPI98592.1    AK404991    BAM20424.1    AK401497    BAM18119.1    AGBW02011937    OWR45886.1    JTDY01000784    KOB75886.1    NEVH01016358    PNF25219.1    GECL01001768    JAP04356.1    GDKW01002372    JAI54223.1    GBGD01002360    JAC86529.1    GEZM01051739    JAV74725.1    KK852471    KDR23178.1    KQ971354    EFA06835.1    KK857844    PTY27509.1    GEDC01027562    GEDC01015580    JAS09736.1    JAS21718.1    GEBQ01018242    JAT21735.1    CCAG010018370    CCAG010018371    GBHO01021012    JAG22592.1    GDHC01001201    GDHC01000494    JAQ17428.1    JAQ18135.1    GECU01009987    JAS97719.1    JRES01000281    KNC32731.1    JXJN01010919    APGK01054057    APGK01054058    BT128468    KB741247    KB632281    AEE63425.1    ENN71981.1    ERL91317.1    GBBI01002912    JAC15800.1    GAMC01008559    JAB97996.1    GBXI01013995    JAD00297.1    PYGN01000203    PSN51312.1    GAKP01013243    JAC45709.1    AJVK01020176    GDHF01032731    GDHF01005569    JAI19583.1    JAI46745.1    GFXV01007143    MBW18948.1    AJWK01021534    ABLF02020856    GFDF01011130    JAV02954.1    GGMR01018542    MBY31161.1    GFDF01011079    JAV03005.1    UFQS01000305    UFQT01000305    SSX02689.1    SSX23063.1    CH963876    EDW76741.1    CP012525    ALC43383.1    DS235430    EEB15709.1    CH479188    EDW40571.1    CH933809    EDW18586.1    CH916366    EDV96279.1    CH940647    EDW69497.1    KRF84421.1    CH902618    EDV38745.1    OUUW01000009    SPP84883.1    CH379069    EAL31080.1    GGLE01006423    MBY10549.1    CM000159    EDW92927.1    CH954178    EDV50248.1    KQS43130.1    CH477368    EAT42484.1    JXUM01011305    JXUM01011306    JXUM01011307    JXUM01011308    JXUM01011309    JXUM01011310    GAPW01003126    KQ560328    JAC10472.1    KXJ83015.1    AE014296    AY052063    AAF47590.1    AAK93487.1    AAN11506.1    CH480817    EDW50140.1    CM000363    CM002912    EDX08886.1    KMY96984.1    DS232512    EDS42903.1    ABJB010638926    DS630485    EEC01268.1    ADMH02000499    ETN66189.1    KK116926    KFM69101.1    ATLV01023045    KE525339    KFB48312.1    MWRG01006528    PRD28899.1    NCKV01000845    RWS29594.1    GGFM01005071    MBW25822.1    GGFJ01008167    MBW57308.1    GGFL01004076    MBW68254.1    GGFK01010663    MBW43984.1    KK117954    KFM71853.1    GECU01032731    JAS74975.1    GANO01002835    JAB57036.1    GDHF01009295    JAI43019.1    GBXI01013996    JAD00296.1    GAMC01008557    JAB97998.1    GAKP01013244    JAC45708.1    GDHF01014351    JAI37963.1    NCKU01001244    RWS12631.1    HACA01016727    HACA01016729    CDW34088.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000235965    UP000027135    UP000007266    UP000092444    UP000092445    UP000091820    UP000078200    UP000037069    UP000092443    UP000092460    UP000095301    UP000019118    UP000030742    UP000245037    UP000092462    UP000092461    UP000079169    UP000007819    UP000192223    UP000075880    UP000007798    UP000092553    UP000009046    UP000008744    UP000009192    UP000001070    UP000008792    UP000007801    UP000268350    UP000001819    UP000069272    UP000192221    UP000002282    UP000008711    UP000008820    UP000069940    UP000249989    UP000000803    UP000001292    UP000000304    UP000002320    UP000001555    UP000000673    UP000054359    UP000030765    UP000288716    UP000285301   

PRIDE

H9JWM3    Q9W068   

Pfam

PF10242   L_HMGIC_fpl        + More
PF00156   Pribosyltran

Interpro

IPR019372   LHFPL        + More
IPR017974   Claudin_CS       
IPR000836   PRibTrfase_dom       
IPR029057   PRTase-like       
IPR005764   Ade_phspho_trans       

SUPFAM

SSF53271   SSF53271       

CDD

cd06223  PRTases_typeI

ProteinModelPortal

H9JWM3   A0A2H1WLU3   A0A2W1BAB6   A0A437B419   A0A2A4K8V8   S4PY30   + More
A0A0N1IQD3   A0A194PZ34   I4DR84   I4DJM9   A0A212EWM5   A0A0L7LKZ8   A0A2J7Q9H2   A0A0V0G8J7   A0A0P4VPE7   A0A069DYH0   A0A1Y1LS63   A0A067RJL6   D6WPM0   A0A2R7X6U8   A0A1B6C8B7   A0A1B6LDF8   A0A1B0FJ69   A0A1A9ZMT0   A0A0A9XPG6   A0A1A9W4L8   A0A146MCC5   A0A1A9UXU7   A0A1B6JEZ0   A0A0L0CKE4   A0A1A9XBJ4   A0A1B0BAC6   A0A1I8N0P7   J3JYY7   A0A023F344   W8BXG3   A0A0A1WNB7   A0A2P8Z492   A0A034VTF9   A0A1B0GM04   A0A0K8TZ73   A0A2H8U0L5   A0A1B0CP82   A0A1S3D269   J9JJ24   A0A1L8D9H4   A0A2S2PNW7   A0A1L8D9E4   A0A1W4XQZ3   A0A336M2F8   A0A182JKB5   B4MXH2   A0A0M3QW20   E0VQQ3   B4GS36   B4KWW5   B4IWQ3   B4LH07   B3M784   A0A3B0JUZ4   Q2M056   A0A182FE58   A0A1W4VVH9   A0A2R5LM32   B4PE89   B3NEX5   Q178A0   A0A023EMD6   Q9W068   B4HW25   B4QN04   B0X8Z6   B7P3U6   W5JTW0   A0A087TVG2   A0A084WDL8   A0A2P6KRE9   A0A443SPZ7   A0A2M3ZBD3   A0A2M4BX53   A0A2M4CSD7   A0A2M4AT92   A0A087U3B4   A0A1B6HK69   U5ETD1   A0A0K8VVW8   A0A0A1WNT4   W8BLY2   A0A034VW39   A0A0K8VGI5   A0A443RBI5   A0A0K2U772  

PDB

6C14     E-value=3.21866e-12,     Score=168

KEGG

101743003    no KO assigned | (RefSeq) lipoma HMGIC fusion partner-like 3 protein

GO

GO:0016021   GO:0007605   GO:0009116   GO:0005737   GO:0006168   GO:0003999  

PANTHER

PTHR12489  

SignalP

Position:   1 - 24,         Likelihood:  0.735640

 

 

Length:

163

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.6943400000001

Exp number, first 60 AAs:

25.68962

Total prob of N-in:

0.98545

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  56

TMhelix

57  -  79

inside

80  -  163

 

 

Pi

205.68963

Theta

55.036001

Tajima's D

1.140973

CLR

0.064231

CSRT

0.701364931753412

Interpretation

Uncertain