SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16167
Pre Gene Modal
BGIBMGA013950
Annotation
hypothetical_protein_KGM_05116_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.411
 

Sequence

CDS
ATGGACGTGGAGTCAAAGATTAAAGAAGATATGTCCTCTCTTGGATGTAAATCTGAAAAGAAGATATCGCTTGCTTATCATTTGTACATGTATTTGATCGACGAAAAACTCATGTACGACTGTGAATATTGTTACAATAGAGACATAGAAACGCTTTATGTTGTCGCCAGAAGGAATAAAAACGATAAACTGAACATATACGTGCCAGTTGCTACGCACGACGATGTCACAATGCATTTAATAAATGAATTACAGGTGAATCTGTGTACAGTAGAAACGGGACCTATGATAAATTTAGCATTCATAGACGGAGACTTTACCACTGTGATATATAGTTTTATAAAAGGCATTGTTGCTAGAACCAATTCGGAGAAGCAAAATAAACGTGAAGAAAAGAGATCTTTCATAAATAATGAACTAAAGAAAAAGAGAAATGAAATTTTAAATGAAGCTTTGAACGGTGTTGTTGTCGATGACTGA
Protein
MDVESKIKEDMSSLGCKSEKKISLAYHLYMYLIDEKLMYDCEYCYNRDIETLYVVARRNKNDKLNIYVPVATHDDVTMHLINELQVNLCTVETGPMINLAFIDGDFTTVIYSFIKGIVARTNSEKQNKREEKRSFINNELKKKRNEILNEALNGVVVDD

Summary

Similarity
Belongs to the heat shock protein 70 family.
EMBL
BABH01018347    KZ150184    PZC72476.1    NWSH01003582    PCG66089.1    ODYU01012595    + More
SOQ59009.1    AGBW02009869    OWR49690.1    GDQN01010190    JAT80864.1    KQ459764    KPJ20106.1    GAIX01006044    JAA86516.1    KQ459583    KPI98588.1    JTDY01003297    KOB69785.1    GDKW01003251    JAI53344.1    PYGN01001705    PSN33291.1    KK852598    KDR20531.1    GECL01001046    JAP05078.1    GAPW01005414    JAC08184.1    CH477221    EAT47336.1    GECZ01004689    JAS65080.1    NNAY01000123    OXU30752.1    GEBQ01019584    JAT20393.1    GEZM01077977    GEZM01077976    GEZM01077975    GEZM01077972    JAV63088.1    KQ434846    KZC08304.1    KZ288255    PBC30640.1    KK107455    QOIP01000010    EZA50466.1    RLU17577.1    ACPB03005323    NEVH01002981    PNF41216.1    LBMM01005013    KMQ91901.1    GGFK01011276    MBW44597.1    GL768663    EFZ11083.1    LJIG01002215    KRT84725.1    GEDC01030112    JAS07186.1    GL888218    EGI64513.1    KQ977279    KYN04214.1    GGFJ01010162    MBW59303.1    KQ980658    KYN14732.1    KQ981382    KYN42191.1    GGFJ01010268    MBW59409.1    KQ976618    KYM79228.1    ADTU01008867    GGFL01006263    MBW70441.1    ADMH02000065    ETN67941.1    GBHO01004284    GBHO01004283    GBRD01013058    GDHC01004988    GDHC01000293    JAG39320.1    JAG39321.1    JAG52768.1    JAQ13641.1    JAQ18336.1    APCN01000214    GDHC01008169    JAQ10460.1    KQ971321    KYB28730.1    MCFD01000018    ORX66018.1   
Pfam
PF09631   Sen15        + More
PF00012   HSP70
Interpro
IPR018593   tRNA-endonuc_su_Sen15        + More
IPR036167   tRNA_intron_Endo_cat-like_sf       
IPR011856   tRNA_endonuc-like_dom_sf       
IPR018181   Heat_shock_70_CS       
IPR013126   Hsp_70_fam       
IPR029047   HSP70_peptide-bd_sf       
IPR029048   HSP70_C_sf       
SUPFAM
SSF53032   SSF53032        + More
SSF100920   SSF100920       
SSF100934   SSF100934       
Gene 3D

Ontologies

Topology

Length:
159
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.02281
Exp number, first 60 AAs:
0.00245
Total prob of N-in:
0.22488
outside
1  -  159
 
 

Population Genetic Test Statistics

Pi
109.407731
Theta
98.425918
Tajima's D
0.337992
CLR
0.468268
CSRT
0.467376631168442
Interpretation
Uncertain
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