Gene
KWMTBOMO16163
Pre Gene Modal
BGIBMGA013947
Annotation
PREDICTED:_homeobox_protein_orthopedia_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 3.669
Sequence
CDS
ATGCTCAACAACCTCACCGCGACAGCCCTCGGAGGTCACAAAGAGTCGTGCCAAGAGGACAGCAAGCCGCACGAGATAAAGCCGAGTCTAGATCGGCCGCACCATGCGCTGGGCGTCCGGCTGCACGCGGCACACAACGTCCGCCCAGAACACTTACAGGGTGGGATCCACCAGCAGCACAGCGGAGGGCACATGTCCACCGTCCCGGTCAGCATGTCCTCATCAGCATCAGACAGCGACAAGCCAGCCAAGCAGAAGAGGCACAGAACGAGGTTCACGCCGGCACAACTGAACGAGCTGGAGAGATGCTTCTCCAAGACTCACTACCCTGACATCTTCATGAGAGAAGAGATCGCTATGAGGATCGGCCTCACCGAAAGCCGAGTCCAGGTATGTGGCGAAACTTTAATCATCATCATCCGTCAGCCATACTTCACTTTAGCTGGTACTGGCGGTGTACTCCGTCAATATAAGTAG
Protein
MLNNLTATALGGHKESCQEDSKPHEIKPSLDRPHHALGVRLHAAHNVRPEHLQGGIHQQHSGGHMSTVPVSMSSSASDSDKPAKQKRHRTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVCGETLIIIIRQPYFTLAGTGGVLRQYK
Summary
Similarity
Belongs to the paired homeobox family.
Uniprot
EMBL
Proteomes
Pfam
PF00046 Homeodomain
Interpro
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
3A01
E-value=1.28647e-12,
Score=171
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
158
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16502
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12791
outside
1 - 158
Population Genetic Test Statistics
Pi
262.254707
Theta
152.780284
Tajima's D
1.967896
CLR
0.032362
CSRT
0.876806159692015
Interpretation
Uncertain
