Silkworm Genome Informatics Database

Gene

KWMTBOMO16162

Pre Gene Modal

BGIBMGA013939

Annotation

PREDICTED:_uncharacterized_protein_LOC106138474_[Amyelois_transitella]

Location

Bomo_Chr28(-):234299-236435 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.269

CDS

ATGTCTATAAAATCGCAGAAATCTTTAAACGAAGAATGTTCCGAGATATTCGAAAGAAGCTACTCAGTGAAAAGTGCATCTGATGATAGTTTATCATGTGACGACGAAGATGAAGAATTGGCCAGAGAGCTGATGAAGAGAATGACGCCCGCCTTCCTCAGTAAATTGAGACGATGTTTCAAGAAAACTAAGGACAAGAGCAGGGAGCGCGACATTGACAGGTTTCTTACAATAGATTAA

Protein

MSIKSQKSLNEECSEIFERSYSVKSASDDSLSCDDEDEELARELMKRMTPAFLSKLRRCFKKTKDKSRERDIDRFLTID

Uniprot

A0A2A4K0M5 A0A212FHD9 A0A0N1IH15 A0A0N1I5C2 A0A194PZX1 A0A437B3F4 + More
A0A0L7LQK6

Pubmed

22118469 26354079 26227816

EMBL

NWSH01000308 PCG77566.1 AGBW02008507 OWR53133.1 KQ459764 KPJ20110.1 + More
KQ459012 KPJ04327.1 KQ459583 KPI98583.1 RSAL01000177 RVE45021.1 JTDY01000316 KOB77732.1

Proteomes

UP000218220 UP000007151 UP000053240 UP000053268 UP000283053 UP000037510 + More

Pfam

PF00155 Aminotran_1_2

Interpro

IPR003654   OAR_dom        + More
IPR017986   WD40_repeat_dom
IPR001680   WD40_repeat
IPR015943   WD40/YVTN_repeat-like_dom_sf
IPR036322   WD40_repeat_dom_sf
IPR004839   Aminotransferase_I/II
IPR015424   PyrdxlP-dep_Trfase
IPR015421   PyrdxlP-dep_Trfase_major
IPR015422   PyrdxlP-dep_Trfase_dom1
IPR019775   WD40_repeat_CS

SUPFAM

SSF50978 SSF50978 + More
SSF53383 SSF53383

Gene 3D

2.130.10.10 3.40.640.10 3.90.1150.10

ProteinModelPortal

A0A2A4K0M5 A0A212FHD9 A0A0N1IH15 A0A0N1I5C2 A0A194PZX1 A0A437B3F4 + More
A0A0L7LQK6

KEGG

NA

GO

GO:0007275 GO:0005634 GO:0003677 GO:0008483 GO:0030170 GO:0009058

Subcellular location

Nucleus

Length:

79

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.45219

outside

1 - 79

Pi

420.248603

Theta

168.645873

Tajima's D

4.114261

CLR

0.007098

CSRT

0.99910004499775

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics