Silkworm Genome Informatics Database

Gene

KWMTBOMO16161

Pre Gene Modal

BGIBMGA013939

Annotation

PREDICTED:_uncharacterized_protein_LOC105842604_[Bombyx_mori]

Location

Bomo_Chr28(-):221252-230075 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.843

CDS

ATGATTGCAGCGTCAGACCGCAGCCTGACCATGTATGACGCTAGCACTCTATCACATACAGCCTTGTATTGTATCACCGGTTTACCCAACATACCTACATGTCTAGGATACAGCCCATCCAGAAAAGCTAGTGATTCTTCCGAGTTGGCGCTAGGCAATGAACGAGGTCAAGTAACAAGGATGCTGTTCTCCCAGCCAAGAGTTCAGTTCATCTACAGCAAGACCAGCGACGCTATTAATTATTACTTTTGGATGGAGTTACTCTCCCCTCCCCACACGAGTCATGTTCAGATATCGTCCCACCGTGCCCACCGGCGGAGTGTCCGTCGCGTTATGTACACACAGCGGGACGTCCTCGTGTCCTGTTCTCTGGACAATACTGTTAGCGTCAGGATCAAACACGTATCGGGAAAATTGAATGATTACACGTTCCGGGTCCACAGGGGTGTCTCCTGCTTCCACATAGTCCCGTCGCTCCGCCTGGTGGTGACTGGTGGGCCGGATGGCTTGGTCCGCCTGTGGGAGCCCACACAGAGCGCGCCGCACGCGACCCTCGCCGCCCCCACAGCGCCACCAGTACTGGGCGTGGCAGTGCTGACACAACTGCAGGTGGTCATGGCTTACTGTGGGAATTGTACGATTCACATCTGGGATATGTACGAAGAATGCTTACTCCAAAGCCTCAAAATCAATTATCCCTTTCTTGGAGTTATCGGGAAGAAAGTGGAGTTTGGAACGTATTGCGTTTTTCCTGGCCCATTGAGAAAAACAGAAGAGACTTTGGGAAAATCGGCGTCTTCTAGGAGGGGCTCCAGTGTGTATCCAGTCTCCGGTGGAGGTTTGGTGCTGGTCTCTGAAGCCGATGAAGGAAAGATGCCTGATAGATTCGAGGACGACCCGGAGTATGCGAAGTACAGCCGCAGCGAGGTGATGGTGACGTGCTGCGAGTACGCGTGTCGAGTGCGCGTGCGGCCCGCGGGCAGCTCCCCCCTGCCGCCCCCCGGCCCCGCGCGCCGCCCGCGCCGGCCCTCGCTGTGGGACCTCAGCCGCCGCAGCCCCGCCCGCACGCCCGAGCGCTCCCCTCAGACTCTGTCTCCTCGGCTATCCACACCCCCGGAGCCGCCCGGAACTGACCACACCAACAAAGACTTGGATGTAATCCTCAAGAAAGCTGGTCTGGAAGGGATATTAGAGAAGAACTTCGTCTTGATGCAGGGCTTGAAACACGACTTGCACAAGAAGCTGGCTGAGCTGAGCGACCGAAATGAATCCATGTCCAGTGCGGTGAACATAGGAGCTCCATACCTGGCTCTGAAGACGTACGAGCCCTCGGCCGTGGAGCGAGCCGAGGATATTATTGAAGCATATAAAAGAGTGCTTAAATTTATTCCCTCCAGTACGACGATAACTCCTACTGCCAGCCAGTCTTCCACTCCAAGGAACAGTAAAGAAACCAAGTGA

Protein

MIAASDRSLTMYDASTLSHTALYCITGLPNIPTCLGYSPSRKASDSSELALGNERGQVTRMLFSQPRVQFIYSKTSDAINYYFWMELLSPPHTSHVQISSHRAHRRSVRRVMYTQRDVLVSCSLDNTVSVRIKHVSGKLNDYTFRVHRGVSCFHIVPSLRLVVTGGPDGLVRLWEPTQSAPHATLAAPTAPPVLGVAVLTQLQVVMAYCGNCTIHIWDMYEECLLQSLKINYPFLGVIGKKVEFGTYCVFPGPLRKTEETLGKSASSRRGSSVYPVSGGGLVLVSEADEGKMPDRFEDDPEYAKYSRSEVMVTCCEYACRVRVRPAGSSPLPPPGPARRPRRPSLWDLSRRSPARTPERSPQTLSPRLSTPPEPPGTDHTNKDLDVILKKAGLEGILEKNFVLMQGLKHDLHKKLAELSDRNESMSSAVNIGAPYLALKTYEPSAVERAEDIIEAYKRVLKFIPSSTTITPTASQSSTPRNSKETK

Uniprot

H9JWM5 A0A2A4JZX7 A0A437B3F4 A0A194PZX1 A0A0N1I5C2 A0A0N1IH15 + More
A0A139WFW6

Pubmed

19121390 26354079 18362917 19820115

EMBL

BABH01018332 BABH01018333 BABH01018334 NWSH01000308 PCG77565.1 RSAL01000177 + More
RVE45021.1 KQ459583 KPI98583.1 KQ459012 KPJ04327.1 KQ459764 KPJ20110.1 KQ971352 KYB26741.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000053268 UP000053240 UP000007266 + More

PRIDE

H9JWM5

Pfam

PF00155 Aminotran_1_2 + More
PF00400 WD40

Interpro

IPR036322   WD40_repeat_dom_sf        + More
IPR015943   WD40/YVTN_repeat-like_dom_sf
IPR017986   WD40_repeat_dom
IPR001680   WD40_repeat
IPR019775   WD40_repeat_CS
IPR004839   Aminotransferase_I/II
IPR015424   PyrdxlP-dep_Trfase
IPR015421   PyrdxlP-dep_Trfase_major
IPR015422   PyrdxlP-dep_Trfase_dom1
IPR011992   EF-hand-dom_pair

SUPFAM

SSF50978   SSF50978        + More
SSF53383   SSF53383
SSF47473   SSF47473

Gene 3D

2.130.10.10 3.40.640.10 3.90.1150.10

ProteinModelPortal

H9JWM5 A0A2A4JZX7 A0A437B3F4 A0A194PZX1 A0A0N1I5C2 A0A0N1IH15 + More
A0A139WFW6

KEGG

105842604 no KO assigned | (RefSeq) uncharacterized LOC105842604

GO

GO:0008483 GO:0030170 GO:0009058 GO:0005515 GO:0006355 GO:0043565 GO:0016311 GO:0016791 GO:0001678 GO:0005536 GO:0046835 GO:0006281 GO:0006259

Length:

486

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22745

Exp number, first 60 AAs:

0.18464

Total prob of N-in:

0.01343

outside

1 - 486

Pi

257.154839

Theta

165.959397

Tajima's D

2.054745

CLR

0

CSRT

0.893205339733013

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics