SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16159  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013945
Annotation
actin?_partial_[Zygaena_filipendulae]
Full name
Actin, muscle       + More
Actin, muscle-type A1      
Location in the cell
Cytoplasmic   Reliability : 3.869
 

Sequence

CDS
ATGTGCGACGACGATGTTGCTGCGCTTGTAGTCGACAATGGCTCCGGCATGTGCAAGGCCGGTTTCGCCGGCGACGACGCGCCCCGCGCCGTCTTCCCGTCCATCGTGGGTCGCCCTCGCCACCAGGGCGTGATGGTCGGTATGGGCCAGAAAGACTCCTACGTGGGTGACGAGGCCCAGAGCAAGAGAGGTATCCTCACTCTGAAGTACCCCATCGAGCACGGTATCATCACCAACTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAATGAGCTGCGTGTCGCCCCCGAGGAGCACCCCGTGCTGCTCACCGAAGCCCCCCTCAACCCCAAGGCCAACAGGGAGAAGATGACCCAGATCATGTTTGAGACCTTCAACTCCCCCGCCATGTACGTCGCCATCCAGGCCGTGCTCTCGCTGTACGCCTCCGGTCGTACCACCGGTATCGTGCTCGACTCCGGAGATGGTGTCTCCCACACCGTACCCATCTACGAAGGTTACGCTCTGCCCCACGCCATCCTCCGTCTGGACTTGGCTGGTCGCGACTTGACCGACTACCTCATGAAGATCCTCACCGAGAGGGGTTACTCGTTCACCACCACCGCTGAGAGGGAAATCGTTCGTGACATCAAGGAGAAGCTCTGCTATGTCGCCCTCGACTTCGAGCAGGAGATGGCCACCGCTGCCGCCTCCACCTCCCTCGAGAAGTCCTACGAACTTCCTGACGGTCAAGTGATCACCATCGGTAACGAGAGGTTCCGTTGTCCCGAGGCTCTCTTCCAGCCTTCCTTCCTGGGTATGGAATCGTGCGGCATCCACGAGACCGTGTACAACTCCATCATGAAGTGCGACGTCGACATCCGTAAGGACCTGTACGCCAACACCGTCATGTCCGGTGGTACCACCATGTACCCCGGTATCGCCGACAGGATGCAGAAGGAGATCACCGCCCTCGCGCCCTCGACCATCAAGATCAAGATCATCGCTCCCCCCGAGAGGAAGTACTCCGTATGGATCGGTGGATCCATCCTGGCTTCCCTGTCCACCTTCCAGCAGATGTGGATCTCGAAGGAGGAATACGACGAGTCCGGCCCCGGCATCGTCCACCGCAAGTGCTTCTAA
Protein
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF

Summary

Subunit
Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. Each actin can bind to 4 others.
Miscellaneous
There are at least 5 different actin genes in this organism.
Similarity
Belongs to the actin family.
Keywords
Acetylation   ATP-binding   Cytoplasm   Cytoskeleton   Muscle protein   Nucleotide-binding   Oxidation   Complete proteome   Reference proteome  
Feature
propeptide  Removed in mature form
chain  Actin, muscle
EMBL
KJ192330    AHW40461.1    KF022227    AGN98097.1    JTDY01000114    KOB78777.1    + More
KZ149970    PZC76094.1    NWSH01001327    PCG71676.1    AK402249    BAM18871.1    KQ459764    KPJ20112.1    LC328974    BBA78421.1    EU601172    ACD40028.1    GAMD01003191    JAA98399.1    GANO01001336    JAB58535.1    KY231202    ARO75867.1    ODYU01012432    SOQ58732.1    BABH01018323    KY039972    ATG34151.1    MG132199    AWX63637.1    AGBW02011390    OWR46741.1    AXCM01013032    AXCN02000961    DS232612    EDS44094.1    CH477224    EAT47188.1    ATLV01019621    KE525275    KFB44434.1    AXCP01003441    AAAB01008900    EAA09436.4    JN410820    KU872540    AB282645    AEP25396.1    AOM81402.1    BAF36825.1    APCN01002933    JXUM01017643    GAPW01002037    KQ560489    JAC11561.1    KXJ82141.1    L13764    AB264725    BAG30799.1    EU035314    ABW03225.1    AJVK01026919    KQ978931    KYN27466.1    KQ976462    KYM84633.1    AAZX01005009    KQ981204    KYN44932.1    ADTU01003540    ADTU01003541    MG243593    AXU38338.1    KQ983089    KYQ47686.1    AY289764    AAQ24506.1    DQ124691    AAZ31061.1    AB509262    BAI77996.1    MG983770    AWV96605.1    AM850110    CAO98769.1    GDIP01170424    JAJ52978.1    KK107013    EZA62930.1    HM629437    HM629439    HM629441    ADN84927.1    X05185    GL888216    EGI64830.1    MG264369    AVT69429.1    AK358850    BAJ90061.1    GFTR01005593    JAW10833.1    AY725778    AAU95191.1    DQ206832    ABA62321.1    AY817141    AAV65298.1    KU196670    AMD16550.1    KY038869    ATP16752.1    GFXV01006509    MBW18314.1    GALX01004399    JAB64067.1    MG993326    AYU58903.1    KU188517    ANE06405.1    KF792064    AHH25009.1    GDKW01000574    JAI56021.1    KT369806    AML25535.1    AY737550    AAU84943.1    KQ971319    EFA00468.1    GECL01003587    JAP02537.1    ABLF02032889    GEMB01002235    JAS00945.1    AY588061    AAT01073.1    NEVH01003508    PNF40452.1    DQ450899    ABE27979.1    KK853207    KDR09838.1    KC161211    AGJ76539.1    KX108734    ANV22067.1    KJ507199    AHY22050.1    FX983744    BAX07243.1    KU196668    AMD16548.1    GEZM01048387    GEZM01048386    JAV76591.1    ACPB03021529    GAHY01000509    JAA77001.1    APGK01027120    KB740648    KB632292    ENN79784.1    ERL91608.1    KU521368    KX428475    ANS71248.1    ANW09586.1    GDIP01175047    GDIP01170376    JAJ53026.1    GECZ01027298    GECZ01011797    JAS42471.1    JAS57972.1    DS235250    EEB13950.1    GEDC01023461    GEDC01016965    GEDC01002583    JAS13837.1    JAS20333.1    JAS34715.1    GBHO01044314    GBRD01005390    JAF99289.1    JAG60431.1    HACA01022742    CDW40103.1   
Pfam
PF00022   Actin
Interpro
IPR004000   Actin        + More
IPR020902   Actin/actin-like_CS       
IPR004001   Actin_CS       
PDB
5CE3     E-value=0,     Score=2022

Ontologies

Topology

Subcellular location
  
Length:
376
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.893579999999999
Exp number, first 60 AAs:
0.00151
Total prob of N-in:
0.04341
outside
1  -  376
 
 

Population Genetic Test Statistics

Pi
202.336798
Theta
180.568102
Tajima's D
0.366746
CLR
20.259396
CSRT
0.471176441177941
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 DEEVAALVVDNGSGMCK 95.92 4e-27
26280517 YMNVDVVKQFMEMYK 96.30 3e-16
27102218 YPIEHGIITNWDDMEK 96.30 3e-16
28556443 CPEALFQPSFLGMESCGIHETVYNSIMK 100.00 3e-15
28556443 CPEALFQPSFLGMESCGIHETVYNSIMK 100.00 3e-15
28556443 CPEALFQPSFLGMESCGIHETVYNSIMK 100.00 3e-15
28556443 CPEALFQPSFLGMESCGIHETVYNSIMK 100.00 3e-15
28556443 CPEALFQPSFLGM 100.00 3e-15
28556443 ANTVMSGGTTMYPGIADR 100.00 3e-15
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPHAILR 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 2e-14
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGYALPH 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 9e-12
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 9e-12
28556443 YSFTTTAER 100.00 2e-10
28467696 HQGVMVGMGQK 100.00 3e-09
28556443 FLGMEANGIHETTYNSIMK 100.00 3e-09
28556443 KDLYANTVMSGGTTMYPGIADR 100.00 4e-09
28556443 KDLYANTVMSGGTTMYPGIADR 100.00 4e-09
28556443 KDLYANTVMSGGTTMYPGIADR 100.00 4e-09
28556443 IWHHTFYNELR 100.00 4e-09
28556443 IWHHTFYNELR 100.00 4e-09
28556443 KDLYANTVMSGGTTMYPGIADR 100.00 5e-09
28556443 KDLYANTVMSGGTTMYPGIADR 100.00 5e-09
28556443 LTEAPLNPK 95.45 6e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPK 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPK 100.00 9e-09
28556443 VAPEEHPVLLTEAPLNPK 100.00 9e-09
26822097 DIYANTVMSGGTTMYPGIADR 95.45 1e-08
26280517 KDEINEAWQR 95.45 1e-08
28467696 KDIYANTVISGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 95.45 1e-08
28556443 KDLYANTVLSGGTTMYPGIADR 95.45 1e-08
28556443 IWHHTFYNELR 95.45 1e-08
28556443 HQGVMVGMGQK 95.45 1e-08
28556443 TTGIVLDSGDGVSHTVPIYEGY 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 TTGIVLDSGDGVSH 100.00 1e-08
28556443 SYELPDGQVITIGNER 100.00 1e-08
21761556 AGFAGDDAPR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLYANTVMSGGTTMYPGIADR 100.00 2e-08
28556443 DLTDYLMK 100.00 2e-08
28556443 DLTDYLMK 100.00 2e-08
28556443 GILTLKYPIEHGIITNWDDMEK 100.00 5e-08
26822097 TAGAYFK 95.24 5e-08
26280517 DIVHSGIDYTMER 95.24 5e-08
28467696 DIYANTVISGGTTMYPGTADR 95.24 5e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DLYANTVLSGGTTMYPGIADR 95.24 6e-08
28556443 DFEQEMATAASSSSLEK 95.24 6e-08
28556443 CPEALFQPSFLGMEANGIHETTYNSIMK 95.24 6e-08
21761556 GYSFTTTAER 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VALDFEQEMATAASSSSLEK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VAPEEHPVLLTEAPLNPK 100.00 2e-06
28556443 VALDFEQEMATAAASTSLEK 100.00 2e-06
28556443 TVPIYEGYALPHAILR 100.00 2e-06
28556443 AGFAGDDAPR 100.00 5e-06
28556443 VALDFEQEMATAAASTSLEK 100.00 7e-06
28556443 TVPIYEGYALPHAILR 100.00 7e-06
28556443 TTGIVLDSGDGVSH 100.00 7e-06
26822097 EITAIAPSTIK 100.00 9e-06
26280517 YGVSSEYFEANDEAAIK 100.00 9e-06
25044914 YPGGSVFPDIMR 100.00 9e-06
24093152 YPGPIDDSITNTDNIVIYTDPTIDTHVSR 100.00 9e-06
27102218 DSHQIDIPPFGR 100.00 9e-06
28467696 YPFSICAGEVGAGAYVAR 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 YPIEHGIITNWDDMEK 100.00 9e-06
28556443 VGDEAQSK 100.00 9e-06
28556443 VAPEEHPVLLTEAPLNPKANR 100.00 9e-06
28556443 MQKEITALAPSTIK 100.00 2e-05
28556443 NTVLSGGTTMYPGIADR 100.00 3e-05
28556443 NTVMSGGTTMYPGIADR 100.00 3e-05
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