Gene
KWMTBOMO16158
Pre Gene Modal
BGIBMGA000211
Annotation
PREDICTED:_retina_and_anterior_neural_fold_homeobox_protein_2-like_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Mitochondrial Reliability : 1.43 Nuclear Reliability : 1.815
Sequence
CDS
ATGCCGGTGCGCCGCAGCCGCACCACGTTCACGACGTACCAGCTGCACGAGCTGGAGCGCGCCTTCGACAAGACGCAGTACCCGGACGTGTTCACGCGCGAGGAGCTGGCCATGAGGCTGGAGCTCAGCGAGGCCAGGGTGCAGGTGTGGTTCCAGAACCGACGCGCGAAGTGGCGCAAGCGTGAGAAGGCGCTCGGCAGAGAGCACGCGCCCTTCCTGCACCACGACCACGTGGTGGGAGAGTGGGGCGGCCCAGGAGAGTGGTGGTCGCTGGGACTTGGCGCCGGGTTCGTTCACCCCGTGTGGAGAGACGCCGAGCCTGCCTTCAGAGCTTTACTGCACAGGTACGTGCTGGCGCTCCCTCCTCCTGCGCTGCTCCCCGCGGAACCGGAGCCGGCGCCCTCTCCCCCCACCGCGCCGCGCTCCCCCGGCCCCGTCCCCGCGCTCGCCCTCGCCCTCACCCCCGCGGACACGCTGCGGCTGCGAGCTCACGACGCAATCCTGCAGGAGAGGGCCTTGCAACACAACAACAAGGTCCACACGTAA
Protein
MPVRRSRTTFTTYQLHELERAFDKTQYPDVFTREELAMRLELSEARVQVWFQNRRAKWRKREKALGREHAPFLHHDHVVGEWGGPGEWWSLGLGAGFVHPVWRDAEPAFRALLHRYVLALPPPALLPAEPEPAPSPPTAPRSPGPVPALALALTPADTLRLRAHDAILQERALQHNNKVHT
Summary
Uniprot
Pubmed
Proteomes
Pfam
PF00046 Homeodomain
SUPFAM
SSF46689
SSF46689
ProteinModelPortal
PDB
3A01
E-value=9.16039e-17,
Score=208
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
181
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00642
Exp number, first 60 AAs:
0
Total prob of N-in:
0.28449
outside
1 - 181
Population Genetic Test Statistics
Pi
232.463683
Theta
160.853216
Tajima's D
1.077105
CLR
0.015991
CSRT
0.684515774211289
Interpretation
Uncertain
