SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16154
Pre Gene Modal
BGIBMGA004519
Annotation
Carbohydrate_sulfotransferase_3_[Papilio_xuthus]
Location in the cell
Mitochondrial   Reliability : 2.402
 

Sequence

CDS
ATGGAAGCCGGCGGTCGTCCCCTGAGGAATATCATCATATCCTCTTGGAGATCAGGCACCACATTCCTCGGCGAGGTGCTCAATGCGATGCCTGGGAATTACTATCATTTTCAGCCTTTACTAAAATATGGACATGTACAACTAAAGGAGTCTGCGCAAGTAAAAGCAGCCTTAAGCTCCATGAAAAGTTTGCTCAAGTGTGACTTTCGAGGGATGGATGACTACTTCGATTACGGAAGCGGCCATGATTTTCAATTCAGTCACAATACCAGATTATGGGACTATTGCGAACACAATAAGGAACTGTGTTCTGACCCTGACTTCATGACCAGGTATTGTAGATTGTTTCCATTTCAAAGCATGAAAATTGTCCGTCTTCGGTTGCAGTTTGTTCAAGAAATATTGTCCGATACTGAGCTTAATGTAAAAGTAGTGTTCCTAACGCGCGATCCTCGCGGAGTGATGGCATCAAGACTGCAGCGGGGTTTCTGTCGCGCTGCTCCGGATTGTTCTAATCCCGAGATTCTTTGTGAAGGCATGATGCGTGATTATGAGGCTGCAGGTCGTTTTCTCAAACTTTATCCTGATAAGCTTTTTGTGCTGCGCTTTGAAGAGTTTGCACTAAACCCGAACAGTACAACGCAAAAATTGCAGAAATTCTTAAGACTAGGACGGACACAAGCGATGGATGAGTATATAGACTCCCACACCAACACAGAAGTGAGTGGAGTCACCTCTACTTTCAGAGTATCCCGTGAAGTGCCTTATCGCTGGAAGAATACTTTGACATTTCAATATGCTGACCAAATACAGACGGCGTGTAAAGAGGCCATGAAGTTATGGGGCTATCGTGCTGCTCACAACGCCACCCACATGGCCAGCGAAGACTTTAAGCCCCTAGAGCAGTACGCGATAATGCAGTAA
Protein
MEAGGRPLRNIIISSWRSGTTFLGEVLNAMPGNYYHFQPLLKYGHVQLKESAQVKAALSSMKSLLKCDFRGMDDYFDYGSGHDFQFSHNTRLWDYCEHNKELCSDPDFMTRYCRLFPFQSMKIVRLRLQFVQEILSDTELNVKVVFLTRDPRGVMASRLQRGFCRAAPDCSNPEILCEGMMRDYEAAGRFLKLYPDKLFVLRFEEFALNPNSTTQKLQKFLRLGRTQAMDEYIDSHTNTEVSGVTSTFRVSREVPYRWKNTLTFQYADQIQTACKEAMKLWGYRAAHNATHMASEDFKPLEQYAIMQ

Summary

EMBL
BABH01035433    KQ459596    KPI95547.1    KZ150252    PZC71813.1    NWSH01001165    + More
PCG72299.1    JTDY01006122    KOB66269.1    AGBW02010386    OWR48599.1    RSAL01000249    RVE43508.1    BABH01002828    GDQN01007329    JAT83725.1    ODYU01008345    SOQ51850.1    NWSH01001302    PCG71793.1    KQ461195    KPJ06735.1    KZ150220    PZC72110.1    KQ981037    KYN10153.1    KK107109    EZA59087.1    KQ981208    KYN44742.1    KQ982351    KYQ57277.1    KQ434781    KZC04460.1    QOIP01000008    RLU19480.1    KQ435798    KOX73445.1    GL445346    EFN89717.1    LBMM01009033    KMQ88446.1    KQ976738    KYM75862.1    ADTU01021189    KQ414618    KOC67872.1    KQ977372    KYN03270.1    GL888208    EGI64923.1    GFDL01004106    JAV30939.1    GFDF01000388    JAV13696.1    GL436803    EFN71447.1    NNAY01003711    OXU18970.1    KK852463    KDR23407.1    KT000411    ANI86009.1    GFDF01000347    JAV13737.1    GEDC01006830    JAS30468.1    KQ768301    OAD53180.1    NEVH01002552    PNF42123.1    KK854611    PTY17342.1    GBBI01000854    JAC17858.1    GBGD01002022    JAC86867.1    CP012523    ALC40205.1    AAZX01008730    AAZX01013956    CH933807    EDW11697.1    GFTR01005883    JAW10543.1    GL765974    EFZ15802.1    ACPB03008218    LJIG01022773    KRT78793.1    KQ971379    EEZ97506.1    GANO01003598    JAB56273.1    GDKW01000995    JAI55600.1    ATLV01023441    ATLV01023442    KE525343    KFB49191.1    GECU01030951    GECU01011815    JAS76755.1    JAS95891.1    CH940654    EDW57887.1    CH916372    EDV99064.1    AAAB01008980    EAA13965.4    CH964214    EDW80374.1    GBXI01015028    JAC99263.1    GGFJ01006989    MBW56130.1    GGFJ01006886    MBW56027.1    GGFL01003155    MBW67333.1    GGFL01003157    MBW67335.1    GDRN01092452    JAI60106.1    IACF01008011    LAB73594.1    APCN01001736    APCN01001737    GAMC01015499    JAB91056.1    GGFL01003156    MBW67334.1    GGFJ01005564    MBW54705.1    GDHF01000558    JAI51756.1    GAKP01011303    JAC47649.1    OUUW01000006    SPP82351.1    GBRD01017735    GBRD01017734    JAG48092.1    GBHO01044786    GBHO01044781    GBHO01040122    GBHO01016022    JAF98817.1    JAF98822.1    JAG03482.1    JAG27582.1    GBHO01044787    GBHO01027405    GBHO01027400    GBHO01011544    GBHO01004808    JAF98816.1    JAG16199.1    JAG16204.1    JAG32060.1    JAG38796.1    JRES01000933    KNC27105.1    GDHC01020608    JAP98020.1    CH379058    EAL34361.2    GBHO01044784    GBHO01044778    GBHO01040135    GBHO01027415    GBHO01027398    GBHO01017744    GBHO01011554    GBHO01004806    GBHO01004790    GBHO01004626    GDHC01010460    JAF98819.1    JAF98825.1    JAG03469.1    JAG16189.1    JAG16206.1    JAG25860.1    JAG32050.1    JAG38798.1    JAG38814.1    JAG38978.1    JAQ08169.1    AE014134    AY058647    AAF52398.2    AAL13876.1    CM000157    EDW87883.1    CM000361    CM002910    EDX03971.1    KMY88539.1    CH902620    EDV32185.2    GBHO01044785    GBHO01044777    GBHO01017003    GBHO01016015    GBHO01004627    JAF98818.1    JAF98826.1    JAG26601.1    JAG27589.1    JAG38977.1    CH954177    EDV59088.1    KA648844    AFP63473.1    GEBQ01004182    JAT35795.1    GAHY01002424    JAA75086.1    AXCN02000692    QCYY01002671    ROT68406.1    LJIJ01000428    ODM97584.1   
Pfam
PF00685   Sulfotransfer_1
Interpro
IPR027417   P-loop_NTPase        + More
IPR000863   Sulfotransferase_dom       
SUPFAM
SSF52540   SSF52540       

Ontologies

Topology

Length:
307
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.12355
Exp number, first 60 AAs:
0.12355
Total prob of N-in:
0.02605
outside
1  -  307
 
 

Population Genetic Test Statistics

Pi
29.471069
Theta
51.663402
Tajima's D
-1.205775
CLR
0.66437
CSRT
0.105944702764862
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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