Gene

KWMTBOMO16146

Pre Gene Modal

BGIBMGA004524

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]

Location

Bomo_Chr27(-):10286794-10289780      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.887

CDS

ATGATGGGAATAACGCTTTTCGTGGGATCTGTCATCGGTTCACTAGTTATGGAGACCATCGGTCGAAGGTCAGCGGTTCTCATGAGTTCGATATTCATGATCTGTGGATGGACATCATTCAGTTTCGCTTCGTCTTTTCCTGTTTTGTTCATAGCGAAATTATTTCAAGGAATATCAGCCGGAATCGGTACTAATGTCGGAAGCATTTTAATTGCAGAATACAGTAGTCCCAAATACAGGGGCTCTTTCATAGCGACGATACCAACTGGTTTATTGTTGGGCATATTTATTTCACATACCTTTGGAATGTTTTACGGCTGGCACCAATTATGTATAATACTACTATTTTTCTCCTTACCCGGATTAATTGCAATCGTTTTCTCGCCAGAATCACCGAGTTTTCTGGTAACTAAGGGACGTTACGATGAATGCAGGAAGGTTTTTCGCTGGCTGAGAGGAACAGATGAGGATGATGAACTCGAAACTATGATTAAAACTAATATGATACTTAAAGAAACCAAGAAGGTTGAATGTGGCAATGTGTCGAAATTAATTCAGAATAAACTGGCATATGGTGTCACTGCATTCAAAAAGAAAGAATTTCGCATTCCAGTTCTTATTATGATGCACTTAAGCGCTATAATGCAATTTAGCGGCTCCTTGGTCTGCGATATGTATGCCTTAGACGTCCATACAGCATTGTATGGTACCGATGTGTACATGTTCAAAGTAATGACGTCTCTGGATGTGCTGAGACTTGTGGCCACCGTGTCGGCCGTCTACATCACCAGCAGGGTGAGGAGGCGCTCCATGCTGTTAGTGTTCGTGTCGCTGAACATAGTGACAGATCTGTGCATAGCTGGACACGTCTACGCCAGACAACACGGTCTTCTTCCGTTCGATCATTGGGCGATTAGTTTATTTCTCCACCACTTCCTTTATTTCATTATCGGGACTGGGTCCATGCCATTGGCGATAATAATTGGTGGCGAAATATTCCCTTTAGCAGACAGGGGTTTCTGTTCGGTAATTACCAGAATATTTTGCTCAGTTTACATGTTTGTGAATATCAAATCCGCTCCATATCTATTCTCATGGGTGGGTGTTGACGGGGCCTTCTCTTTGTATGCCTTGATACATTCTTATAGTTTGATTGTTACTTTAATTTTGTTACCGGAAACGAAAGATAAAACTCTACAACGAATCGAAGATGAGTTTAGGGGACATACTATTGCTAATCACGAAGAAGCCTTTGAGATGAAGGATTATGACGTGAGGGATGATGGTGATTAA

Protein

MMGITLFVGSVIGSLVMETIGRRSAVLMSSIFMICGWTSFSFASSFPVLFIAKLFQGISAGIGTNVGSILIAEYSSPKYRGSFIATIPTGLLLGIFISHTFGMFYGWHQLCIILLFFSLPGLIAIVFSPESPSFLVTKGRYDECRKVFRWLRGTDEDDELETMIKTNMILKETKKVECGNVSKLIQNKLAYGVTAFKKKEFRIPVLIMMHLSAIMQFSGSLVCDMYALDVHTALYGTDVYMFKVMTSLDVLRLVATVSAVYITSRVRRRSMLLVFVSLNIVTDLCIAGHVYARQHGLLPFDHWAISLFLHHFLYFIIGTGSMPLAIIIGGEIFPLADRGFCSVITRIFCSVYMFVNIKSAPYLFSWVGVDGAFSLYALIHSYSLIVTLILLPETKDKTLQRIEDEFRGHTIANHEEAFEMKDYDVRDDGD

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4T7   E0X905   D0PWZ5   H9J4U8   H9J4R7   H9J4S0   + More
H9J4T5   A0A212FJ74   A0A212F161   A0A0L7L8D8   A0A194QPY2   A0A0N1IHN6   A0A437ATT4   A0A3S2P2D1   A0A2H1WVP2   A0A194QJ23   A0A2W1BG84   A0A194QHU0   H9J4R6   A0A0N1IPS2   A0A2A4KAY2   H9J4X0   A0A2H1V0I3   A0A2W1BD78   A0A2A4JUU3   A0A023PNK9   H9J4X7   A0A2A4JTG8   A0A2A4JU29   H9J4S1   A0A2H1WFL6   A0A194QJI7   A0A2A4KA42   A0A0N1I9K7   A0A0L7L8F3   A0A2H1W936   A0A2W1B9E8   A0A2A4JT91   A0A194QKX0   A0A437BR67   A0A437BK01   A0A3S2NWF9   A0A212FCC0   A0A0L7LQ31   A0A3S2LUZ6   H9J4X1   A0A194QJ47   A0A2A4JNG3   H9J525   A0A2H1WAU6   A0A2H1W9B8   A0A2A4JSU4   A0A0L7LRT2   A0A0N1IIX6   A0A2H1X0D6   A0A2A4J748   A0A437BJF6   A0A212F9B1   A0A2H1WB04   A0A2W1BFI0   A0A194QJ30   A0A0N1IG19   H9J4W9   A0A194QJ40   A0A212F9C9   A0A0N0PE20   A0A0L7KZR3   H9J4X6   A0A2W1BBH7   A0A3S2LEF2   A0A194QJ80   A0A182U3G7   A0A182HWW7   H9J539   A0A182Y162   Q7Q6Y6   A0A182VI49   A0A2A4J655   A0A182LJ94   A0A1S4GQI2   A0A182XN09   A0A182RRX2   A0A182PHI4   A0A182MLS9   A0A212ENJ2   A0A182WKH8   B0W5I2   A0A182NHP5   A0A2H1WAF2   A0A182FDK9   W5JEJ5   A0A182KD28   Q17LS5   A0A084VC86   A0A182GCQ0   H9J4X4   A0A182GTB3   A0A194QJJ6  

Pubmed

19121390    22118469    26227816    26354079    28756777    24730650    + More
25244985    12364791    20966253    20920257    23761445    17510324    24438588    26483478   

EMBL

BABH01035469    GQ871755    ADM86146.1    FJ373021    ACQ66002.1    BABH01035543    + More
BABH01035544    BABH01035538    BABH01035539    BABH01035466    BABH01035467    AGBW02008317    OWR53759.1    AGBW02010956    OWR47467.1    JTDY01002352    KOB71610.1    KQ458671    KPJ05561.1    KQ460077    KPJ17887.1    RSAL01000460    RVE41642.1    RSAL01000045    RVE50592.1    ODYU01011356    SOQ57052.1    KPJ05558.1    KZ150249    PZC71836.1    KQ458981    KPJ04505.1    BABH01035548    KPJ17881.1    NWSH01000008    PCG80953.1    BABH01025733    ODYU01000118    SOQ34347.1    PZC71835.1    NWSH01000578    PCG75536.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    BABH01025717    NWSH01000704    PCG74682.1    PCG75537.1    BABH01035527    BABH01035528    BABH01035529    ODYU01008354    SOQ51875.1    KPJ05554.1    PCG80949.1    KPJ17880.1    KOB71609.1    ODYU01007122    SOQ49615.1    PZC71838.1    PCG74683.1    KPJ05555.1    RSAL01000017    RVE52904.1    RVE50588.1    RVE50589.1    AGBW02009205    OWR51384.1    JTDY01000342    KOB77618.1    RSAL01000181    RVE44925.1    BABH01025731    KPJ05583.1    NWSH01001042    PCG72950.1    BABH01038881    SOQ49614.1    SOQ49613.1    PCG74684.1    JTDY01000230    KOB78170.1    KPJ17884.1    ODYU01012470    SOQ58795.1    NWSH01002771    PCG67556.1    RVE50594.1    AGBW02009614    OWR50324.1    ODYU01007347    SOQ50032.1    KZ150133    PZC73021.1    KPJ05563.1    KPJ17891.1    KPJ05573.1    OWR50323.1    KQ460126    KPJ17588.1    JTDY01004123    KOB68566.1    BABH01025720    PZC70687.1    RVE44926.1    KPJ05572.1    APCN01001553    BABH01038877    BABH01038878    BABH01038879    BABH01038880    AAAB01008960    EAA11457.4    PCG67555.1    AXCM01002831    AGBW02013662    OWR43027.1    DS231843    EDS35465.1    SOQ50033.1    ADMH02001735    ETN61249.1    CH477213    EAT47626.1    ATLV01010625    KE524589    KFB35580.1    JXUM01009472    KQ560284    KXJ83288.1    BABH01025723    JXUM01086634    KQ563580    KXJ73638.1    KPJ05559.1   

Proteomes

UP000005204    UP000007151    UP000037510    UP000053268    UP000053240    UP000283053    + More
UP000218220    UP000075902    UP000075840    UP000076408    UP000007062    UP000075903    UP000075882    UP000076407    UP000075900    UP000075885    UP000075883    UP000075920    UP000002320    UP000075884    UP000069272    UP000000673    UP000075881    UP000008820    UP000030765    UP000069940    UP000249989   

PRIDE

H9J4T7    E0X905    D0PWZ5    H9J4U8    H9J4R7    H9J4S0    + More
H9J4T5    H9J4R6    H9J4X0    H9J4X7    H9J4S1    H9J4X1    H9J525    H9J4W9    H9J4X6    H9J539    H9J4X4   

Pfam

PF00083   Sugar_tr

Interpro

IPR005829   Sugar_transporter_CS        + More
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR003663   Sugar/inositol_transpt       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4T7   E0X905   D0PWZ5   H9J4U8   H9J4R7   H9J4S0   + More
H9J4T5   A0A212FJ74   A0A212F161   A0A0L7L8D8   A0A194QPY2   A0A0N1IHN6   A0A437ATT4   A0A3S2P2D1   A0A2H1WVP2   A0A194QJ23   A0A2W1BG84   A0A194QHU0   H9J4R6   A0A0N1IPS2   A0A2A4KAY2   H9J4X0   A0A2H1V0I3   A0A2W1BD78   A0A2A4JUU3   A0A023PNK9   H9J4X7   A0A2A4JTG8   A0A2A4JU29   H9J4S1   A0A2H1WFL6   A0A194QJI7   A0A2A4KA42   A0A0N1I9K7   A0A0L7L8F3   A0A2H1W936   A0A2W1B9E8   A0A2A4JT91   A0A194QKX0   A0A437BR67   A0A437BK01   A0A3S2NWF9   A0A212FCC0   A0A0L7LQ31   A0A3S2LUZ6   H9J4X1   A0A194QJ47   A0A2A4JNG3   H9J525   A0A2H1WAU6   A0A2H1W9B8   A0A2A4JSU4   A0A0L7LRT2   A0A0N1IIX6   A0A2H1X0D6   A0A2A4J748   A0A437BJF6   A0A212F9B1   A0A2H1WB04   A0A2W1BFI0   A0A194QJ30   A0A0N1IG19   H9J4W9   A0A194QJ40   A0A212F9C9   A0A0N0PE20   A0A0L7KZR3   H9J4X6   A0A2W1BBH7   A0A3S2LEF2   A0A194QJ80   A0A182U3G7   A0A182HWW7   H9J539   A0A182Y162   Q7Q6Y6   A0A182VI49   A0A2A4J655   A0A182LJ94   A0A1S4GQI2   A0A182XN09   A0A182RRX2   A0A182PHI4   A0A182MLS9   A0A212ENJ2   A0A182WKH8   B0W5I2   A0A182NHP5   A0A2H1WAF2   A0A182FDK9   W5JEJ5   A0A182KD28   Q17LS5   A0A084VC86   A0A182GCQ0   H9J4X4   A0A182GTB3   A0A194QJJ6  

PDB

4LDS     E-value=2.70535e-17,     Score=217

KEGG

101746100    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-2 homolog

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0016311   GO:0016791   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

430

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

208.59835

Exp number, first 60 AAs:

33.19244

Total prob of N-in:

0.63344

POSSIBLE N-term signal

sequence

inside

1  -  23

TMhelix

24  -  46

outside

47  -  49

TMhelix

50  -  72

inside

73  -  78

TMhelix

79  -  101

outside

102  -  105

TMhelix

106  -  128

inside

129  -  205

TMhelix

206  -  228

outside

229  -  240

TMhelix

241  -  263

inside

264  -  269

TMhelix

270  -  292

outside

293  -  311

TMhelix

312  -  334

inside

335  -  346

TMhelix

347  -  369

outside

370  -  372

TMhelix

373  -  392

inside

393  -  430

 

 

Pi

300.050737

Theta

215.747039

Tajima's D

1.21972

CLR

0.006448

CSRT

0.72096395180241

Interpretation

Uncertain