Gene

KWMTBOMO16139

Pre Gene Modal

BGIBMGA004525

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]

Location

Bomo_Chr27(-):10207973-10213290      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.943

CDS

ATGTGTCGTTGCGAGCTAAGAGCCACACCGTTTGTGAAACAGTGTTTTGCGGTCTCAAGTGTGGTTCTGAACATGATATCGTATGGCCTTACAATCGGATACAACGCCTCGCTGTTTTCCGAACTCAGAAGGACTCGAGAGATACCTCTAGACATACATTCAGAGTCTTGGTTGGCATCTCTGATCGGATTAATGCTTTTCGTTGGCTCTGCAGTCGGGTCACTGGCTATGGAAACCATCGGTCGAAAATACACCGTCCTCTTGAGTTCAGTATTGATGATTTGCGGGTGGATATCGTTCAGCTTGGCTTCATCTTTTCCTGTCTTGTTGATGGGTAAAATTCTTCAAGGAACATCCGTCGGAATCGGTACCAATATGGGAAGTATTTTATTGGGAGAATACAGCAGTCCTAGATACAGGGGATCTTTTATAGCAACTATACCTACTGCTTTGTTATTGGGAACCTTAATAGCACATATTTTTGCAATGTTTTATAGCTGGCATGATATATCGAAAATCCTACTGTTTTTCTCCATACCCGGATTAATTGCAGCTGTATTTTCGCCAGAATCACCGAGCTTTCTGGTAACTAAGGGACGTTACGATGAATGCAGGAAGGTTTTCCGCTGGTTGAGAGGAACAGACGAGGATGACGAACTCGAAACAATGATCAAAACTGACATGATAGCCAAAGCAACTAAAAAGATCAATAAATATCACTTAACGAAGATAATCAAGAACAAAGTGACATACTTGTTGACAGCTTTTAACAAGAGAGAATTTCGTATTCCCGTAATTATCACGATGCACTTGACGGCTATAAATCAGTTCTGCGGATCTCTGATAAACGACATGTATGCTCTAGACGTCCACACCGCGTTTTTAATTGTTACTTTTATTGTTCTACCGGAGACTAAAGACAAAACTCTTCAAGAAGTCGAAGATGAGTTAAGAGGATGCACTACTGTCTATGTAGATCGTGAAGAAGCGTTTGAATTAAAGTCAGGAATTAATAATTTAGAAAGTTGTTAA

Protein

MCRCELRATPFVKQCFAVSSVVLNMISYGLTIGYNASLFSELRRTREIPLDIHSESWLASLIGLMLFVGSAVGSLAMETIGRKYTVLLSSVLMICGWISFSLASSFPVLLMGKILQGTSVGIGTNMGSILLGEYSSPRYRGSFIATIPTALLLGTLIAHIFAMFYSWHDISKILLFFSIPGLIAAVFSPESPSFLVTKGRYDECRKVFRWLRGTDEDDELETMIKTDMIAKATKKINKYHLTKIIKNKVTYLLTAFNKREFRIPVIITMHLTAINQFCGSLINDMYALDVHTAFLIVTFIVLPETKDKTLQEVEDELRGCTTVYVDREEAFELKSGINNLESC

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4R7   E0X905   D0PWZ5   H9J4T7   H9J4U8   H9J4S0   + More
A0A2H1WVP2   A0A212F161   A0A0N1IPS2   A0A023PNK9   A0A2A4JTG8   A0A194QJ23   H9J4X7   A0A2A4JUU3   A0A2W1BG84   A0A2A4KAY2   A0A194QKX0   A0A194QHU0   A0A3S2P2D1   A0A2A4JT91   A0A2W1BD78   A0A212FJ74   A0A2H1W936   A0A3S2LUZ6   A0A194QPY2   A0A2H1WFL6   A0A0N0PDT5   A0A0N1IHN6   A0A2H1WAU6   H9J4S1   A0A194QJI7   H9J4X0   H9J4X1   A0A3S2NWF9   A0A2A4JNG3   H9J4R6   A0A212FCC0   A0A194QJ40   A0A0N1IG19   H9J525   A0A2A4JSU4   A0A212F9B1   A0A2A4J748   A0A194QJ30   A0A2H1WB04   A0A0N1I9K7   A0A2W1BFI0   A0A194QJ80   A0A2A4KA42   A0A2W1BCE3   A0A3S2LEF2   A0A0L7KZR3   A0A2W1B9E8   A0A2H1WK46   H9J017   A0A2H1V0I3   A0A0N1IDG3   E0X906   A0A2H1WKZ9   A0A212F9C9   H9J4X2   H9J539   A0A182RRX2   A0A194QJJ6   W5JEJ5   A0A182VI49   A0A182WKH8   A0A2A4KB29   A0A336MDU0   A0A182LJ94   A0A182XN09   A0A0N1IPZ0   A0A2W1BF54   A0A182Y162   A0A182FDK9   A0A212ENJ2   A0A182NHP5   A0A084VC86   A0A1L8DF47   A0A182KD28   A0A1L8DFA5   A0A182IUY7   A0A182MLS9   A0A2H1X0D6   A0A194R9K8   A0A182PHI4   A0A1S4GQI2   A0A0N0PE41   A0A139WGJ0   Q7Q6Y6   B0W5I2  

Pubmed

19121390    22118469    26354079    24730650    28756777    26227816    + More
20920257    23761445    20966253    25244985    24438588    12364791    18362917    19820115   

EMBL

BABH01035544    GQ871755    ADM86146.1    FJ373021    ACQ66002.1    BABH01035469    + More
BABH01035543    BABH01035538    BABH01035539    ODYU01011356    SOQ57052.1    AGBW02010956    OWR47467.1    KQ460077    KPJ17881.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    NWSH01000704    PCG74682.1    KQ458671    KPJ05558.1    BABH01025717    NWSH01000578    PCG75536.1    KZ150249    PZC71836.1    NWSH01000008    PCG80953.1    KPJ05555.1    KQ458981    KPJ04505.1    RSAL01000045    RVE50592.1    PCG74683.1    PZC71835.1    AGBW02008317    OWR53759.1    ODYU01007122    SOQ49615.1    RSAL01000181    RVE44925.1    KPJ05561.1    ODYU01008354    SOQ51875.1    KPJ17885.1    KPJ17887.1    SOQ49614.1    BABH01035527    BABH01035528    BABH01035529    KPJ05554.1    BABH01025733    BABH01025731    RVE50589.1    NWSH01001042    PCG72950.1    BABH01035548    AGBW02009205    OWR51384.1    KPJ05573.1    KPJ17891.1    BABH01038881    PCG74684.1    AGBW02009614    OWR50324.1    NWSH01002771    PCG67556.1    KPJ05563.1    ODYU01007347    SOQ50032.1    KPJ17880.1    KZ150133    PZC73021.1    KPJ05572.1    PCG80949.1    PZC70686.1    RVE44926.1    JTDY01004123    KOB68566.1    PZC71838.1    ODYU01009098    SOQ53272.1    BABH01018801    ODYU01000118    SOQ34347.1    KQ459158    KPJ03590.1    GQ871756    ADM86147.1    ODYU01009373    SOQ53753.1    OWR50323.1    BABH01025724    BABH01038877    BABH01038878    BABH01038879    BABH01038880    KPJ05559.1    ADMH02001735    ETN61249.1    PCG80950.1    UFQT01001016    SSX28504.1    KQ460126    KPJ17589.1    PZC71837.1    AGBW02013662    OWR43027.1    ATLV01010625    KE524589    KFB35580.1    GFDF01009026    JAV05058.1    GFDF01009027    JAV05057.1    AXCM01002831    ODYU01012470    SOQ58795.1    KQ460761    KPJ12541.1    AAAB01008960    KPJ17886.1    KQ971345    KYB27009.1    EAA11457.4    DS231843    EDS35465.1   

Proteomes

UP000005204    UP000007151    UP000053240    UP000218220    UP000053268    UP000283053    + More
UP000037510    UP000075900    UP000000673    UP000075903    UP000075920    UP000075882    UP000076407    UP000076408    UP000069272    UP000075884    UP000030765    UP000075881    UP000075880    UP000075883    UP000075885    UP000007266    UP000007062    UP000002320   

PRIDE

H9J4R7    E0X905    D0PWZ5    H9J4T7    H9J4U8    H9J4S0    + More
H9J4X7    H9J4S1    H9J4X0    H9J4X1    H9J4R6    H9J525    H9J017    E0X906    H9J4X2    H9J539   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4R7   E0X905   D0PWZ5   H9J4T7   H9J4U8   H9J4S0   + More
A0A2H1WVP2   A0A212F161   A0A0N1IPS2   A0A023PNK9   A0A2A4JTG8   A0A194QJ23   H9J4X7   A0A2A4JUU3   A0A2W1BG84   A0A2A4KAY2   A0A194QKX0   A0A194QHU0   A0A3S2P2D1   A0A2A4JT91   A0A2W1BD78   A0A212FJ74   A0A2H1W936   A0A3S2LUZ6   A0A194QPY2   A0A2H1WFL6   A0A0N0PDT5   A0A0N1IHN6   A0A2H1WAU6   H9J4S1   A0A194QJI7   H9J4X0   H9J4X1   A0A3S2NWF9   A0A2A4JNG3   H9J4R6   A0A212FCC0   A0A194QJ40   A0A0N1IG19   H9J525   A0A2A4JSU4   A0A212F9B1   A0A2A4J748   A0A194QJ30   A0A2H1WB04   A0A0N1I9K7   A0A2W1BFI0   A0A194QJ80   A0A2A4KA42   A0A2W1BCE3   A0A3S2LEF2   A0A0L7KZR3   A0A2W1B9E8   A0A2H1WK46   H9J017   A0A2H1V0I3   A0A0N1IDG3   E0X906   A0A2H1WKZ9   A0A212F9C9   H9J4X2   H9J539   A0A182RRX2   A0A194QJJ6   W5JEJ5   A0A182VI49   A0A182WKH8   A0A2A4KB29   A0A336MDU0   A0A182LJ94   A0A182XN09   A0A0N1IPZ0   A0A2W1BF54   A0A182Y162   A0A182FDK9   A0A212ENJ2   A0A182NHP5   A0A084VC86   A0A1L8DF47   A0A182KD28   A0A1L8DFA5   A0A182IUY7   A0A182MLS9   A0A2H1X0D6   A0A194R9K8   A0A182PHI4   A0A1S4GQI2   A0A0N0PE41   A0A139WGJ0   Q7Q6Y6   B0W5I2  

PDB

4LDS     E-value=5.86653e-11,     Score=162

KEGG

101744174    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0055085   GO:0005215   GO:0005351   GO:0005887   GO:0046872   GO:0016311   GO:0016791   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259  

Length:

343

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

130.40656

Exp number, first 60 AAs:

26.21932

Total prob of N-in:

0.98371

POSSIBLE N-term signal

sequence

inside

1  -  19

TMhelix

20  -  42

outside

43  -  56

TMhelix

57  -  76

inside

77  -  87

TMhelix

88  -  110

outside

111  -  113

TMhelix

114  -  136

inside

137  -  140

TMhelix

141  -  163

outside

164  -  172

TMhelix

173  -  195

inside

196  -  343

 

 

Pi

214.325601

Theta

18.790383

Tajima's D

0.798915

CLR

0.161137

CSRT

0.610169491525424

Interpretation

Uncertain