Gene

KWMTBOMO16133

Pre Gene Modal

BGIBMGA014493

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841899?_partial_[Bombyx_mori]

Location

Bomo_Chr27(+):10018886-10024554      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 2.016

CDS

ATGATGCAGATCAGAATACTAGTAGTGGTACGCCACAAGAGCGTGAATGCAGCATACGTAGCCGGAGGTGAGACTTCCGCGGTCGCGGCCCACCCAGTCCGCGAGAACCGGGCAGATCGCCTCGACGGTACGGAGGCCGGCCGACGGGTCCGCCAAACGACGAGACCTCGCCTCCAGCACGGACTGCCGATATTGGAGCCCCCGCGCTCCGGATGCACTTGCGCTAGGGCGCGCCGCCTCGTAGGAGACTGTGAGGCTCGAGCTGCTACTTGCCTCACAAAAATACAGCCTGCAAAACCTGAACAACCTCCTCATCCGTGGGCGCCCGGCTCTCGCCTGCAAGTCGGCTGTTACGTGTGCGGTGATGCGAGCCATGTAGCTTCTGGGTGTTCCATGCGCTACAAGAAGAAAAACGACACTGCTCCAGGTGCTGTGGCAGGTTCAACCAGAGACGTCAACGATACATATCGACCGGAGCAGTACGGCTTCAGAGAGGGCCGCTCGACTATCGACGCGATTCTGCGCGTGAGGGCCCTCTCCGACGAAGCCGTATCCCGGGGCGGGGTGGCGATGGCGTTATCCTTAGATGTAAGGAACGCCTTCAACACCCTGCCCTGGTCGGTGATCGCGGGGGCGCTGGAGTATCACGGCGTCCCCGCATACCTCCGCCGACTGATCGGCTCCTACCTCGAGGGCAGGTCGATCCAGTGCATCGGACACGGTGGGGCGATGTACCGCTTCCCCGTCGAGCGCGGTGTTCCGCAGGGGTCCGTCCTGGGCCCCCTGCTGTGGAACATCGGCTACGACTGGGTCCTGCGGGGCGTCATTCGGGGACCCCTCCCCGGGCTCAGCGTAATTTGTTACGCTGACGACACGTTGGTCGTGGCTCCGGGGAGGGACTACCGGGAGTCTGCCCGTCTGGCGTGCGCAGGCGTGGCACACGTCGTCACTAGGATCCGACGGTTGGGGCTCGAGGTGGCGCTCGACAAAACCCAGGCCCTGCTCTTTCACGGGCCGGGACGAGCGCCGCCTGTGGGTGCCCACCTCGTGATCGGAGGCGTCCGCGTCGGGGTCGGGGTGACCGGTCTTCGGTACCTCGGCCTCGAACTGGACGGTCGGTGGAACTTCCGCGCTCACTTTGAGAAGTTGGGCCCTCGGCTGATGGCAACGGCCGGCTCTTTGAGCCGGCTCCTTCCAAACGTCGGGGGTCCCGATCAGGTGGCGCGCCGCCTCTACATGGGGGTGGTGCGGTCGATAGCACTATACGGCGCTCCCGTATGGTGCCACGCCCTGACCCGCGAGAACGTCGCCGCGCTGCGACGTCCACAGCGCGCGATCGCGGTCAGGGCGATCCGAGGATACCGCACCGTCTCCTTCGAGGCGGCGTGCTTGCTCGCCGGGGCGCCACCCTGGGACCTGGAGGCGGAGGCGCTCGCTGCCGATTACCGGTGGCGTAGCGACCTCCGCTCTAGGGGGGAAGGGCGCCCCGGCGAAGGAGTAGTTCGAGCGCGGAGGCTCCAATCTCGGCGGTCCGTGCTGGAGGCGTGGTCTCGCCGCTTGGCGGACCCGTCGGCCGGCCTCCGTACCGTCGAGGCGGTCCGTCCGGTCCTCGCGGACTGGGTGGGCCGCGACCGCGGATGCCTCACCTTCCGGCTGACGCAAATGTTGACCGGCCATGGTTGTTTTGGCCGGTACTTGCACAAGATAGCCGGAAGGGAACCGACGGCGCAGTGCCATCACTGCGCGGACCGCGACGAGGATGACACAGCGGAACACACGCTGGCGCGTTGCTCTGGATTCGACGAGCAACGCGCCGCCCTCGTCGCGGTCATAGGTGAGGACCTCTCGCTGCCGCGCGTCGTGGCTACGATGCTCGGCAGCGACGCGTCCTGGAAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCAGAAGGAGGCGGCGGAGCGAGAGAGGGAGAGCTCTTCCCTTTCCGCACCGATCCGTCGCCGTCGAGCCGGGGGCCGGAGGCGGGAATACGCCCGTACGTCCCGGCCCCTGTAG

Protein

MMQIRILVVVRHKSVNAAYVAGGETSAVAAHPVRENRADRLDGTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLVGDCEARAATCLTKIQPAKPEQPPHPWAPGSRLQVGCYVCGDASHVASGCSMRYKKKNDTAPGAVAGSTRDVNDTYRPEQYGFREGRSTIDAILRVRALSDEAVSRGGVAMALSLDVRNAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEGRSIQCIGHGGAMYRFPVERGVPQGSVLGPLLWNIGYDWVLRGVIRGPLPGLSVICYADDTLVVAPGRDYRESARLACAGVAHVVTRIRRLGLEVALDKTQALLFHGPGRAPPVGAHLVIGGVRVGVGVTGLRYLGLELDGRWNFRAHFEKLGPRLMATAGSLSRLLPNVGGPDQVARRLYMGVVRSIALYGAPVWCHALTRENVAALRRPQRAIAVRAIRGYRTVSFEAACLLAGAPPWDLEAEALAADYRWRSDLRSRGEGRPGEGVVRARRLQSRRSVLEAWSRRLADPSAGLRTVEAVRPVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLHKIAGREPTAQCHHCADRDEDDTAEHTLARCSGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDFCESTISQKEAAERERESSSLSAPIRRRRAGGRRREYARTSRPL

Uniprot

Q868Q4   Q8MY27   Q8MY31   Q8MY33   Q8MY35   A0A0J7N1D9   + More
A0A3S2N998   A0A2W1C3J5   O01419   A0A194R5D3   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KQK3   A0A0J7KIW1   A0A0J7KJH4   A0A0J7KLT9   A0A0J7NMN5   A0A0J7KIM6   A0A0J7KPZ3   A0A0J7K3R6   A0A0J7K3F1   A0A0J7KPR0   A0A0J7KMU1   A0A0J7KLH8   A0A0J7KRB8   A0A0J7NAV8   A0A0J7KYD2   A0A0J7K3R2   A0A0J7N7S8   A0A0J7KWU5   A0A0J7KW81   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KMG5   A0A0J7KF40   A0A0J7MY17   A0A0J7NFZ0   A0A2S2PBP5   A0A2S2PEZ7   J9LJ80   X1WJY4   J9KJG8   A0A0J7NEG9   J9KV04   A0A142LX45   A0A2H8TR36   J9LFA1   Q9N9Z1   J9KPP8   D6WC19   W8ANK7   W8ADE4   F7IYV2   A0A139W9A6   F7IYU8   X1WMW4   A0A2M3Z1C1   A0A139W940   F7IYV6   A0A3Q0JIB3  

Pubmed

12644555    28756777    9092665    26354079    25527032    18362917    + More
19820115    24495485   

EMBL

AB090825    BAC57926.1    AB078935    BAC06462.1    AB078931    BAC06456.1    + More
AB078930    BAC06454.1    AB078929    BAC06452.1    LBMM01012027    KMQ86470.1    RSAL01000481    RVE41577.1    KZ149896    PZC78733.1    D85594    BAA19776.1    KQ460685    KPJ12887.1    LBMM01019839    KMQ83438.1    LBMM01019838    KMQ83439.1    LBMM01006954    KMQ90166.1    LBMM01006671    KMQ90407.1    LBMM01004272    KMQ92618.1    LBMM01006725    KMQ90373.1    LBMM01006657    KMQ90417.1    LBMM01005733    KMQ91252.1    LBMM01003245    KMQ93755.1    LBMM01007036    KMQ90099.1    LBMM01004505    KMQ92346.1    LBMM01015018    KMQ84954.1    LBMM01015025    KMQ84953.1    LBMM01004634    KMQ92224.1    LBMM01005216    KMQ91703.1    LBMM01005948    KMQ91066.1    LBMM01003988    KMQ92922.1    LBMM01007425    KMQ89740.1    LBMM01002052    KMQ95336.1    LBMM01014956    KMQ84982.1    LBMM01008682    KMQ88705.1    LBMM01002480    KMQ94776.1    KMQ94772.1    LBMM01012412    KMQ86235.1    LBMM01008278    KMQ89009.1    LBMM01005465    KMQ91492.1    LBMM01008422    KMQ88894.1    LBMM01014122    KMQ85315.1    LBMM01005474    KMQ91485.1    GGMR01014195    MBY26814.1    GGMR01015159    MBY27778.1    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    ABLF02011238    ABLF02041886    LBMM01006110    KMQ90925.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    KU543683    AMS38371.1    GFXV01003903    MBW15708.1    ABLF02041323    ABLF02041325    AJ278684    CAB99192.1    ABLF02009991    ABLF02009992    ABLF02054952    KQ971309    EEZ99146.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    AB593323    BAK38643.1    KQ972544    KXZ75870.1    AB593321    BAK38639.1    ABLF02059310    GGFM01001554    MBW22305.1    KQ972691    KXZ75806.1    AB593326    BAK38647.1   

Proteomes

UP000036403    UP000283053    UP000053240    UP000007819    UP000007266    UP000079169    + More

PRIDE

Q868Q4    O01419    Q9N9Z1   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF07776   zf-AD
PF00096   zf-C2H2
PF01553   Acyltransferase
PF03372   Exo_endo_phos
PF00098   zf-CCHC

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR012934   Znf_AD       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR002123   Plipid/glycerol_acylTrfase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57667   SSF57667       
SSF57756   SSF57756       

Gene 3D

3.60.10.10    

ProteinModelPortal

Q868Q4   Q8MY27   Q8MY31   Q8MY33   Q8MY35   A0A0J7N1D9   + More
A0A3S2N998   A0A2W1C3J5   O01419   A0A194R5D3   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KIY5   A0A0J7KJG6   A0A0J7KQK3   A0A0J7KIW1   A0A0J7KJH4   A0A0J7KLT9   A0A0J7NMN5   A0A0J7KIM6   A0A0J7KPZ3   A0A0J7K3R6   A0A0J7K3F1   A0A0J7KPR0   A0A0J7KMU1   A0A0J7KLH8   A0A0J7KRB8   A0A0J7NAV8   A0A0J7KYD2   A0A0J7K3R2   A0A0J7N7S8   A0A0J7KWU5   A0A0J7KW81   A0A0J7N0R3   A0A0J7KFH2   A0A0J7KMG5   A0A0J7KF40   A0A0J7MY17   A0A0J7NFZ0   A0A2S2PBP5   A0A2S2PEZ7   J9LJ80   X1WJY4   J9KJG8   A0A0J7NEG9   J9KV04   A0A142LX45   A0A2H8TR36   J9LFA1   Q9N9Z1   J9KPP8   D6WC19   W8ANK7   W8ADE4   F7IYV2   A0A139W9A6   F7IYU8   X1WMW4   A0A2M3Z1C1   A0A139W940   F7IYV6   A0A3Q0JIB3  

KEGG

105841899    no KO assigned | (RefSeq) uncharacterized LOC105841899

GO

GO:0003964   GO:0016746   GO:0016021   GO:0008270   GO:0003676   GO:0004519  

Length:

680

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18504

Exp number, first 60 AAs:

0.01419

Total prob of N-in:

0.00216

outside

1  -  680

 

 

Pi

186.936383

Theta

58.534877

Tajima's D

1.869283

CLR

0.286795

CSRT

0.860956952152392

Interpretation

Uncertain