SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16130  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004534
Annotation
PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X7_[Bombyx_mori]
Full name
Calcium-transporting ATPase      
Location in the cell
Cytoplasmic   Reliability : 2.101
 

Sequence

CDS
ATGATTCACTGTCTTAGCGGTTCGAAGGCTGACCTGCAGCATCGGCGGGAAGTGTTCGGTTCAAACTTGATCCCGCCGAAGCCACCCAAGACTTTCCTGACGCTAGTATGGGAGGCTCTGCAGGATGTCACCCTTATTATCCTAGAAGTTGCTGCTGTTGTTTCATTAGGATTGAGTTTTTACAAGCCCGCAGATGACCCCAATGATGCGGCACATTTGGACGAAGAGGAGGGCCACTACCAGTGGATCGAGGGTCTGGCCATCTTAATATCGGTTATAGTCGTCGTCATAGTAACAGCGTTTAATGATTACACGAAAGAAAGGCAATTCAGAGGTCTGCAGTCTCGGATAGAAGGCGAGCACAAGTTCGCCGTGATCCGCGGCACGGAGGTCAAACAGGTGCCCATCAGCGAGATCGTCGTCGGCGACATATGTCAGATCAAGTACGGAGATCTGCTTCCGGCTGACGGTATCCTGCTGCAGAGCAACGATCTTAAGATTGACGAGTCATCCCTGACGGGAGAATCGGACCATGTCAAGAAGGGTGAAACATTTGATCCCATGGTGCTATCCGGTACACACGTTATGGAAGGTTCCGGCAAGATGTTAGTGACAGCCGTGGGGGTGAACTCCCAGGCCGGCATCATCTTCACGCTGCTCGGTGCCGCTGTCGACAAGCAGGAGAAGGAAATTAAACAGAAGAAGAAAGGTGAGGAGGAGGGAGTGGGGGGCGTGGGCGCCAACCACGCGCCGCCCGACGACAACCACGCGCCGCCCGCCGCCGACAAGCCGCCGCCAGAGCCGCAACACAAGAAGGAGAAGTCCGTGCTGCAGGCCAAACTTACCAAGCTCGCTATACAGATCGGTTACGCCGGCTCGACGATCGCCGTGCTCACGGTCATAATCCTGGTCATACAGTTCTGCGTCCGGACGTTCGCCATAGAGGGCAAGCCGTGGAAGGCGACCTACATTAACAACCTGGTGAAGCACCTCATCATCGGTGTGACGGTGCTGGTCGTCGCCGTGCCCGAGGGGCTGCCGCTCGCTGTCACACTCTCGCTTGCTTATTCCGTAAAGAAAATGATGAAAGACAACAATCTGGTGCGCCACCTGGACGCCTGCGAGACCATGGGCAACGCCACCGCCATCTGCTCGGACAAGACCGGCACGCTGACCACCAACCGCATGACGGTCGTGCAGTCGTACATCTGCGAGAAGCTGTGCAAGGTGACGCCCAACTACCGCGACATCCCGCCGCCCGTCGCCGACCTCATCGTGCAGGGCGTGGCGCTCAACTCCGCCTTCACCTCCAGGATCATGCCATCACAAGATCCAACGATGCCATCCATGCAAGTCGGTAACAAAACTGAATGCGCCCTCCTCGGATTCGTCCTGGCTCTAGGGCAGAGCTACGAAGCCGTCAGAGAAAGTCATCCCGAAGAGTCGTTCACCAGGGTGTACACCTTCAACTCGGTGCGGAAGAGCATGTCCACCGTCATACCGCACAACGGCGGCTACAGGCTCTACACTAAGGGAGCTTCGGAGATCGTGCTTAAAAAGTGCGCCTTCATCTACGGGCACGAGGGCCGCCTGGAGAAGTTCACGCGCGACATGCAGGAGCGGCTCGTGCGCCAGGTCATCGAGCCCATGGCCTGCGACGGGCTGCGGACCATCTCCGTGGCCTACCGGGACTTCGTGCCCGGGAAGGCGGACATCAACCAGGTGCACGTGGACCAGGAGCCGCACTGGGACGACGAGGACAACATCGTGAACAACCTGACCTGCCTCTGCGTTGTAGGGATCGAGGACCCCGTGAGGCCCGAGGTTCCAGAGGCCATCCGCAAGTGTCAGAAGGCCGGCATCACGGTGCGCATGGTGACGGGAGACAACGTGAACACCGCGCGCTCCATCGCCATGAAGTGCGGCATCCTCAGGCCCACGGACGACTTCCTGGTGCTCGAGGGGAAGGAGTTCAACCAACGCATACGGGACGCCAACGGAGAGGTGCAGCAGCAGCTGGTGGACAAGGTGTGGCCCAGCCTGCGCGTGCTGGCGCGCTCGTCGCCCACGGACAAGTACACGCTCGTCAAAGGCATGATCGAGTCCAAGGCATTCGACACGCGCGAGGTGGTGGCCGTCACCGGGGACGGGACCAACGACGGACCCGCGCTCAAGAAGGCCGACGTCGGATTCGCCATGGTGCGCCGCCACTACACGCACGCACACACGCACACACACACGCGCTGA
Protein
MIHCLSGSKADLQHRREVFGSNLIPPKPPKTFLTLVWEALQDVTLIILEVAAVVSLGLSFYKPADDPNDAAHLDEEEGHYQWIEGLAILISVIVVVIVTAFNDYTKERQFRGLQSRIEGEHKFAVIRGTEVKQVPISEIVVGDICQIKYGDLLPADGILLQSNDLKIDESSLTGESDHVKKGETFDPMVLSGTHVMEGSGKMLVTAVGVNSQAGIIFTLLGAAVDKQEKEIKQKKKGEEEGVGGVGANHAPPDDNHAPPAADKPPPEPQHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILVIQFCVRTFAIEGKPWKATYINNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVTPNYRDIPPPVADLIVQGVALNSAFTSRIMPSQDPTMPSMQVGNKTECALLGFVLALGQSYEAVRESHPEESFTRVYTFNSVRKSMSTVIPHNGGYRLYTKGASEIVLKKCAFIYGHEGRLEKFTRDMQERLVRQVIEPMACDGLRTISVAYRDFVPGKADINQVHVDQEPHWDDEDNIVNNLTCLCVVGIEDPVRPEVPEAIRKCQKAGITVRMVTGDNVNTARSIAMKCGILRPTDDFLVLEGKEFNQRIRDANGEVQQQLVDKVWPSLRVLARSSPTDKYTLVKGMIESKAFDTREVVAVTGDGTNDGPALKKADVGFAMVRRHYTHAHTHTHTR

Summary

Description
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
Catalytic Activity
ATP + Ca(2+)(in) + H2O = ADP + Ca(2+)(out) + H(+) + phosphate
Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
EC Number
7.2.2.10
Pfam
PF12424   ATP_Ca_trans_C        + More
PF00690   Cation_ATPase_N
PF00689   Cation_ATPase_C
Interpro
IPR008250   ATPase_P-typ_transduc_dom_A_sf        + More
IPR006068   ATPase_P-typ_cation-transptr_C       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR001757   P_typ_ATPase       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR030320   ATP2B1       
IPR022141   ATP_Ca_trans_C       
IPR036412   HAD-like_sf       
IPR023214   HAD_sf       
IPR006408   P-type_ATPase_IIB       
IPR018303   ATPase_P-typ_P_site       
IPR004014   ATPase_P-typ_cation-transptr_N       
IPR034304   ATP2B4       
IPR030325   ATP2B3       
SUPFAM
SSF81665   SSF81665        + More
SSF81660   SSF81660       
SSF56784   SSF56784       
SSF81653   SSF81653       
Gene 3D
PDB
6A69     E-value=9.11273e-162,     Score=1466

Ontologies

Topology

Subcellular location
Membrane  
Length:
748
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
103.89829
Exp number, first 60 AAs:
16.03522
Total prob of N-in:
0.74528
POSSIBLE N-term signal
sequence
inside
1  -  42
TMhelix
43  -  60
outside
61  -  79
TMhelix
80  -  102
inside
103  -  201
TMhelix
202  -  224
outside
225  -  286
TMhelix
287  -  309
inside
310  -  329
TMhelix
330  -  352
outside
353  -  748
 
 

Population Genetic Test Statistics

Pi
234.508353
Theta
181.266469
Tajima's D
0.743714
CLR
0.351605
CSRT
0.590620468976551
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 QVPISEIVVGDICQIK 95.24 1e-07
28467696 KGEITIDGSEGR 95.24 1e-07
28556443 INALGGPQELCK 100.00 3e-06
28556443 MVTGDNVNTAR 100.00 3e-06
26822097 AGQIIWIR 100.00 3e-05
28467696 IMPGIVAIR 100.00 3e-05
26822097 YGDIIPADGIIIQSNDIK 100.00 0.001
26280517 QVNPNWAVNIIAEIPPK 100.00 0.001
27102218 DIPPPVADIIVQGVAINSAFTSR 100.00 0.001
28467696 QVPIIAR 100.00 0.001
28556443 LYTSPTDGLSGSK 100.00 0.001
28556443 LQTQVIGGELQER 100.00 0.016
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