Pre Gene Modal
BGIBMGA004534
Annotation
Plasma_membrane_calcium-transporting_ATPase_3_[Papilio_xuthus]
Location in the cell
PlasmaMembrane Reliability : 3.077
Sequence
CDS
ATGCTGTGGGTGAACCTGATCATGGACACGCTGGCGTCCCTGGCGCTGGCCACGGAGATGCCGACCCCGGACTTGCTGCAGCGGAAGCCGTACGGACGGACCAAGCCCCTCATCTCGCGCACCATGATGAAGAACATCCTCGGACAGGCCATCTATCAGCTCTTCATCATATTCATGCTGTTGTTTGTCGGCGACAAGATGCTGAACATCCCGTCGGGCCGGTACCAGCCGCTGGGCTCGGAGCCGACGCAGCACTTCACCATCATCTTCAACACGTTCGTGATGATGACCCTCTTCAACGAGATCAACGCCAGGAAGATCCACGGCCAGCGGAACGTGTTCGAGGGACTCTTCACCAACCCCATCTTCTATTCCATTTGGGTCGGGACTGCGCTGTCGCAGGTGGTCATCATCCAGTTCGGCGGCATGGCGTTCAGCACGGCGGGACTCACGATAGATCAGTGGCTGTGGTGCTTGTTCTTCGGAGCGGGGACCTTGGTTTGGGGCCAGCTCGTCACCACGCTACCCACTAGGAAAATACCCAAGACCCTCTCGTGGGGTCGCGGGCAGGCCGGCCAGGAGTGCGCCCCCGCGCCGGACTACGACAACGAGCTCGACAAGAAGCCGCGCGCCGGACAGATCCTCTGGATCCGCGGACTCACGCGCCTACAGACGCAGCTGCGAGTGGTGCGCGCCTTCAAGTCGACGCTGGAGGACCTGGAGGAGCGCCTGTCGTCTCATTCGGCGGCGGCAGGGCTCCGCTCGCGGCTCAGGGCCGCGCCGCAGGACTTCGCAGCATGGGACAGTGATGTGTGCACGATCGCCATGGCTGCCACACCCCCGGCACAGACACCTGTGCCCGGTGACGTCACCAGCCGCCATCTTGTCCGCGCCGCCTCGACAAAATGGCGGCTTCGCTTAGTTTTATTTGCTATTGGATGCCCTCATATCCCGACCCAGCTAGCGAATGCCCTTGGATCGAACTTAAATAAGTCACAATCTAATGAAACTGCTTTTACAATCGACCTCGGGTTCCGGCCGGAGCCGCGCCGGACCCGAGCCGGATCGGTGCCGGAGCCGCGCCGGATCCGTGCCGGAGCAGTTTCGTTTGCATTGTCGCAGCGCAGTGCGGTGATAGGTGGCGAGTTACAAGAACGGTTGATACCGGTCCCCTACAGCAAGACATCCACAGATCAAGCTATCCGCGTGGTGAACGCGTTCCGGCAGGGGCTGGACTCGCGCGGCTCGCTGGCGGACGCGGCGCTGGCGGAGGCGCTCCGGAAGCAGACGGCGCTCTCGAAGCGGTACTCGCAGTCTTCGGGGGCAGAGGCCGAGCACGCGCTGGCGCCGCACGACCTGGACGTGGAGCGCCTGTCCAGCCACAGCCACACCGAGACCGCGGTGTAA
Protein
MLWVNLIMDTLASLALATEMPTPDLLQRKPYGRTKPLISRTMMKNILGQAIYQLFIIFMLLFVGDKMLNIPSGRYQPLGSEPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVFEGLFTNPIFYSIWVGTALSQVVIIQFGGMAFSTAGLTIDQWLWCLFFGAGTLVWGQLVTTLPTRKIPKTLSWGRGQAGQECAPAPDYDNELDKKPRAGQILWIRGLTRLQTQLRVVRAFKSTLEDLEERLSSHSAAAGLRSRLRAAPQDFAAWDSDVCTIAMAATPPAQTPVPGDVTSRHLVRAASTKWRLRLVLFAIGCPHIPTQLANALGSNLNKSQSNETAFTIDLGFRPEPRRTRAGSVPEPRRIRAGAVSFALSQRSAVIGGELQERLIPVPYSKTSTDQAIRVVNAFRQGLDSRGSLADAALAEALRKQTALSKRYSQSSGAEAEHALAPHDLDVERLSSHSHTETAV
Summary
Uniprot
ProteinModelPortal
PDB
6A69
E-value=7.61968e-80,
Score=757
Ontologies
GO
Topology
Length:
468
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
82.1866
Exp number, first 60 AAs:
15.79709
Total prob of N-in:
0.96899
POSSIBLE N-term signal
sequence
inside
1 - 44
TMhelix
45 - 64
outside
65 - 83
TMhelix
84 - 103
inside
104 - 115
TMhelix
116 - 138
outside
139 - 152
TMhelix
153 - 175
inside
176 - 468
Population Genetic Test Statistics
Pi
285.758149
Theta
222.238923
Tajima's D
0.897879
CLR
0.126621
CSRT
0.636518174091295
Interpretation
Uncertain
