SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16127
Pre Gene Modal
BGIBMGA004516
Annotation
PREDICTED:_uncharacterized_protein_LOC106138040_isoform_X1_[Amyelois_transitella]
Transcription factor
Location in the cell
Nuclear   Reliability : 4.623
 

Sequence

CDS
ATGGTTAATTATTGCTGTGTATCGGGTTGCGGAAGAAACAGTAGAAATTATAAACTTTTAAATTATTATTGTTTACCAAAAGAAGAGGAGAGACAAAAGGAATGGTTGAAACTAGCAAATAGACTAGATCTACTGGAAAAGAAACCCGATGTCCGCCTGAGATATAGGGTGTGTTCCAGACATTTCGCTCAGTCCAGTATAAAGAACAAACACTTGCACGCTGATGCTGTACCAAGTCTACATTTACCAGGGGAAGATGGAGAAACCGGAAGCAGTGAAGAAGAGCTACACCATGAAAACATAGTATGCAATGGATGTAAGAAACCAGTATATGGTTTCCGTTATAAGTGTCTCACATGCCCCGATTACGATTTATGTTCCACTTGTGAGGTCCTGGAGGAGCATCCCAATCATTATATGATCAGGATACCAAAGCCTCTCAAATTTAAAACGATTCAAGACAGAATACAGAACTTACAGAATGTATTCAGACAAGAGTCCCTGAACGATCCTGACAGCAGCGATGATGAGCCCATAACCAAGTATGTCAAGAAATATGATAGTGGTGTGGACTTGTCGGATGATGTGAAGAATGATATAAGGAATGAAGTGTCAATGATGCTGAATCGTCAGCAAGAGCAAAAGAAGGTGAAAAAGAGCAGAATCGGTAAAAAGCGAGGGAGTGAAGCTGAGAGGCCTATGAAAAAGCAGAAGGTAGAAGTTGCAGCATCTGGTATTAGAGATGAAATACCAGAGGTAGTGTTTGCGGACGTGAATGAAGCTAATAACAGTGCTATGGAAATTAAACATGAAGTTCCAGTTTTTTATGTTCCTAACGCTGAAGATACAGCACAACCCACAATACAAATGAAATTGAGTGACGACCTCTCCATGCTCGTGATAGATATGAATAACCAGAAAACTTTGTACAGTTTATAG
Protein
MVNYCCVSGCGRNSRNYKLLNYYCLPKEEERQKEWLKLANRLDLLEKKPDVRLRYRVCSRHFAQSSIKNKHLHADAVPSLHLPGEDGETGSSEEELHHENIVCNGCKKPVYGFRYKCLTCPDYDLCSTCEVLEEHPNHYMIRIPKPLKFKTIQDRIQNLQNVFRQESLNDPDSSDDEPITKYVKKYDSGVDLSDDVKNDIRNEVSMMLNRQQEQKKVKKSRIGKKRGSEAERPMKKQKVEVAASGIRDEIPEVVFADVNEANNSAMEIKHEVPVFYVPNAEDTAQPTIQMKLSDDLSMLVIDMNNQKTLYSL

Summary

Pfam
PF05485   THAP        + More
PF00569   ZZ
Interpro
IPR038441   THAP_Znf_sf        + More
IPR000433   Znf_ZZ       
IPR006612   THAP_Znf       
Gene 3D
PDB
5YPG     E-value=9.54967e-11,     Score=159

Ontologies

Topology

Length:
312
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.05428
outside
1  -  312
 
 

Population Genetic Test Statistics

Pi
179.428165
Theta
161.722154
Tajima's D
0.438894
CLR
0.411129
CSRT
0.499075046247688
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号