Gene

KWMTBOMO16126  Validated by peptides from experiments

Annotation

heat_shock_protein_hsp20.1_[Bombyx_mori]

Location

Bomo_Chr27(-):9746861-9747555      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.011

CDS

ATGTCTCTGCTGCCATTCATCCTGGGATACCAACCGAACCGCCTTCGCGATCAGGACTTCGGACTGGCGCTTACTCCGGACGATCTCCTGACGGCCGTCATCACGCCAACGATGTCCAGAGATTACTACCGGCCGTGGAAGCAGATGGCGATGGCCAATAGAGACGTCGGTTCCACCATCACCTCGAATAAGGACAAATTCCAGGTCAACTTAGACGTTCAACACTTTTCGCCCGAAGAAATCTCAGTGAAGACAGCCGACGGCTACGTCATCGTCGAAGGTAAGCACGAGGAGAGGCAGGACGAGCACGGCTACATCTCTCGTCAGTTCACGCGGCGTTACGCTCTGCCAGAAAACTGTAACCCCGACACTGTCGAATCTCGGCTGTCCTCTGACGGCGTGCTGACCGTGATCGCTCCCAGGACTCCGGCTGCCACGAAGAACGAGCGAGCTGTTCCCATCACTCAAACCGGCCCGGTCCGGAAGGAGATTAAGGAGCCCACTGCGGAAGTTGAGAGCAACGAAACAAAACAATGA

Protein

MSLLPFILGYQPNRLRDQDFGLALTPDDLLTAVITPTMSRDYYRPWKQMAMANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTAEVESNETKQ

Similarity

Belongs to the small heat shock protein (HSP20) family.

Uniprot

Q5R1P6   B9VTS0   A0A212F0A4   A0A385PHG6   A0A212ERQ7   A0A2A4JK93   + More
A0A3S2L9M7   A0A220W0C8   A0A222NUL2   Q1AMF5   A0A2H1W170   A0A212FIM4   F1C928   A0A0K0XQY0   A0A0A7BZ27   A0A2D1CRP7   A0A0A7BZF0   A0A0N1PFQ5   A0A194Q5N9   E2F397   A0A343EU23   A0A2A4J9J4   A0A0C5PKY8   Q9GN07   A0A2H4LHL7   A0A0P0CJ81   A0A222NUK8   A0A161GJ22   Q1HAT5   A0A0A7BZM3   A0A2H1W2W7   A0A2A4J3F8   Q0KKB1   R9S0D1   A0A2H4LI82   O18634   I4DMV4   E2F3A1   R9RZX9   Q9GSB6   A0A0K0XQX1   A0A3S2PJT0   Q5R1P7   A0A2W1BHM1   A0A2A4J9F7   A0A2H1X0S0   A0A0N0PBJ9   A0A194QB65   A0A1E1W5U5   A0A212EIS8   A0A212FJB9   A0A0A7RCE5   S4NMP5   A0A0A7RCH5   A0A2D1CRQ9   E2F399   A0A0N1INR0   A0A2H1W1Y8   A0A0L7K2K7   R4HL93   B2ZHW3   A0A2W1BH28   A0A2H1WKW0   M1FKQ7   Q5MGN8   A0A0A7BZ70   A0A0L7L9D3   A0A2A4K9P8   Q5MGL1   B9VTS8   A0A0A7RE39   A0A212EIS5   Q2LCS7   S4P4G2   F1C930   H9J540   A0A222NUK4   A0A0K0XR51   A0A0L7L8L1   A0A075BR54   A0A222NUL6   A0A0N0PBK3   A0A2H1WH29   A0A2A4JUN7   D9J2L8   H9J516   A0A345W859   E2F398   A0A212FBC6   A0A2A4JLW2   A0A2W1BPZ5   A0A194PVM7   H9J4S5   Q5R1P4   A0A2A4JVR5   Q0KKB2   A0A0K0XR10   Q1AMF7   Q1AMF6   A0A2H4G808  

Pubmed

17031055    22118469    28687981    28755305    26196395    24947609    + More
26354079    21510953    25527122    28756777    17630658    9654738    22651552    19121390    25514417    23622113    26227816    18804477    23763950    16023793   

EMBL

AB195971    BAD74196.1    FJ602780    ACM24346.1    AGBW02011158    OWR47131.1    + More
MG816464    AYA93248.1    AGBW02012988    OWR44131.1    NWSH01001148    PCG72391.1    RSAL01000078    RVE48718.1    KY701309    ASK86231.1    KX958479    ASQ43195.1    DQ063591    AAZ14792.1    ODYU01005718    SOQ46845.1    AGBW02008361    OWR53574.1    HQ219475    ADX96000.1    KP843906    AKS40085.1    KJ461920    AHW45922.1    KX977585    ATN45244.1    KJ461916    AHW45918.1    KQ460891    KPJ10838.1    KQ459460    KPJ00669.1    HM046613    ADK55520.1    MF067296    ASM61894.1    NWSH01002265    PCG68755.1    KM881570    AJQ22645.1    AF315317    AF315319    FJ602772    AAG30944.1    AAG30946.1    ACM24338.1    KX845562    KZ150055    ATB54993.1    PZC74337.1    KR137569    ALI87024.1    KX958476    ASQ43192.1    KU096844    AMY63177.1    JX491641    KC710020    AB244517    AGC23337.1    AGM90553.1    BAE94664.1    KJ461917    AHW45919.1    SOQ46844.1    NWSH01003339    PCG66520.1    PCG66521.1    AB251898    BAF03558.1    KC710018    KC710022    AGM90551.1    AGM90555.1    KX845559    ATB54990.1    PZC74333.1    U94328    AAC36146.1    AK402622    BAM19244.1    HM046617    ADK55524.1    KC710019    KC710024    RSAL01000012    AGM90552.1    AGM90557.1    RVE53491.1    BABH01025846    AF315318    AAG30945.2    KP843896    AKS40075.1    RVE53492.1    AB195970    BAD74195.1    PZC74338.1    PCG68757.1    ODYU01012514    SOQ58867.1    KPJ10841.1    KPJ00666.1    GDQN01008714    JAT82340.1    AGBW02014566    OWR41397.1    AGBW02008280    OWR53838.1    KM217080    AJA32868.1    GAIX01014246    JAA78314.1    KM217079    AJA32867.1    KX977584    ATN45243.1    HM046615    ADK55522.1    KPJ10837.1    SOQ46842.1    JTDY01014370    KOB52036.1    HQ647012    AET10424.1    EU668902    ACD01216.1    KZ150133    PZC73025.1    ODYU01009326    SOQ53668.1    JQ708200    AFQ02692.1    AY829748    AAV91362.1    KJ461913    AHW45915.1    JTDY01002160    KOB71979.1    NWSH01000008    PCG80951.1    AY829747    AY829775    AAV91361.1    AAV91389.1    FJ602788    ACM24354.1    KM217077    KM217078    AJA32865.1    OWR41396.1    DQ336356    ABC68342.2    GAIX01009047    JAA83513.1    HQ219477    ADX96002.1    BABH01042227    KX958471    ASQ43187.1    KP843904    AKS40083.1    JTDY01002346    KOB71621.1    KC689795    KX845561    KZ150027    AGQ42773.1    ATB54992.1    PZC74791.1    KX958480    ASQ43196.1    KQ460970    KPJ10176.1    ODYU01008627    SOQ52368.1    NWSH01000548    PCG75721.1    HM359007    ADI48314.1    MH042022    AXJ21597.1    HM046614    ADK55521.1    AGBW02009356    OWR51030.1    PCG72390.1    PZC74790.1    KQ459597    KPI95180.1    BABH01035507    AB195973    BAD74198.1    PCG75724.1    AB251897    BAF03557.1    KP843907    AKS40086.1    DQ063589    AAZ14790.1    DQ063590    AAZ14791.1    KU522479    APX61065.1   

Proteomes

UP000007151    UP000218220    UP000283053    UP000053240    UP000053268    UP000005204    + More
UP000037510   

PRIDE

Q5R1P6    B9VTS0    Q9GN07    Q9GSB6    Q5R1P7    B9VTS8    + More
H9J540    H9J516    H9J4S5    Q5R1P4   

Pfam

PF00011   HSP20

Interpro

IPR008978   HSP20-like_chaperone        + More
IPR001436   Alpha-crystallin/HSP       
IPR002068   A-crystallin/Hsp20_dom       
IPR036116   FN3_sf       
IPR003961   FN3_dom       

SUPFAM

SSF49764   SSF49764        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.790    

CDD

cd00063  FN3

ProteinModelPortal

Q5R1P6   B9VTS0   A0A212F0A4   A0A385PHG6   A0A212ERQ7   A0A2A4JK93   + More
A0A3S2L9M7   A0A220W0C8   A0A222NUL2   Q1AMF5   A0A2H1W170   A0A212FIM4   F1C928   A0A0K0XQY0   A0A0A7BZ27   A0A2D1CRP7   A0A0A7BZF0   A0A0N1PFQ5   A0A194Q5N9   E2F397   A0A343EU23   A0A2A4J9J4   A0A0C5PKY8   Q9GN07   A0A2H4LHL7   A0A0P0CJ81   A0A222NUK8   A0A161GJ22   Q1HAT5   A0A0A7BZM3   A0A2H1W2W7   A0A2A4J3F8   Q0KKB1   R9S0D1   A0A2H4LI82   O18634   I4DMV4   E2F3A1   R9RZX9   Q9GSB6   A0A0K0XQX1   A0A3S2PJT0   Q5R1P7   A0A2W1BHM1   A0A2A4J9F7   A0A2H1X0S0   A0A0N0PBJ9   A0A194QB65   A0A1E1W5U5   A0A212EIS8   A0A212FJB9   A0A0A7RCE5   S4NMP5   A0A0A7RCH5   A0A2D1CRQ9   E2F399   A0A0N1INR0   A0A2H1W1Y8   A0A0L7K2K7   R4HL93   B2ZHW3   A0A2W1BH28   A0A2H1WKW0   M1FKQ7   Q5MGN8   A0A0A7BZ70   A0A0L7L9D3   A0A2A4K9P8   Q5MGL1   B9VTS8   A0A0A7RE39   A0A212EIS5   Q2LCS7   S4P4G2   F1C930   H9J540   A0A222NUK4   A0A0K0XR51   A0A0L7L8L1   A0A075BR54   A0A222NUL6   A0A0N0PBK3   A0A2H1WH29   A0A2A4JUN7   D9J2L8   H9J516   A0A345W859   E2F398   A0A212FBC6   A0A2A4JLW2   A0A2W1BPZ5   A0A194PVM7   H9J4S5   Q5R1P4   A0A2A4JVR5   Q0KKB2   A0A0K0XR10   Q1AMF7   Q1AMF6   A0A2H4G808  

PDB

3J07     E-value=3.70095e-27,     Score=297

KEGG

692487    K09542 crystallin, alpha B | (RefSeq) Hsp20.1; heat shock protein hsp20.1

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0005840   GO:0016021  

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01287

Exp number, first 60 AAs:

0.01287

Total prob of N-in:

0.00690

outside

1  -  178

 

 

Pi

190.312533

Theta

158.052509

Tajima's D

0.641798

CLR

162.243302

CSRT

0.55807209639518

Interpretation

Uncertain