Gene

KWMTBOMO16120

Pre Gene Modal

BGIBMGA004511

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Papilio_polytes]

Location

Bomo_Chr27(+):9614856-9629583      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.936

CDS

ATGGTTTTGGAAAAATGGATAACCCCTTTCAAGAGACAATGTTTCGTGGTCGCTGGCGTGTCTCTGAACATGTCGCAGCTTGGAATGGTGTTTGGATACGCTGCCATTCTCGTGCCACAGCTGCGAAAGTCGGACTCGCTCATACCAATCGATGAAGCCTCCGAATCTTGGGTCGCTGCATTGCCTGGATTCGCTTTGGTGTTGGGAAACCTTGTGGTGCCACCGGTGATGGCTAAATTCGGAAGACGAATAGCCAATATCATCAGCATAGTGATCGTCTTAACTGGATGGATATCCATTACGTTATCTACAGGCCTCACGCTGCTCCTCATAGGAAGGTTCCTGCAAGGACTGTCCGTGGGCATGGGTTCGTGTCTCATTCCGATAATGATAGGCGAATACACAAGCTCAACGAGGAGGGGTCAATTCTCAATGTGCATGTCGGTTATAATGGGCTTAGGTACGTTAGCAGTCCACACTGTCGGATCCTATTACTCGTGGAAAATCACGGCCCTCGTGTGTTCAACAATAACGTTCTTCGATTTAATAATCGTCATATTATCACCGGAATCGCCGAGCTGGCTCGCGGCACAGGGAAGATACGACGAATGCAGAAGAGTGTTTAGATTACTAAGAACAATCGACGAAGAGGAGGAACTAGATAAAATGCTGGCGAAGAGTAAAGAGCTCGAAGATGCGAAGATCATCCGTACCGGTTTCATGGTTAAGGTCAAAGGAGGTTTTAGTTACATAAACAAAACAATAACTAGGAAGGAGTTTTACAAGCCAATCTTTATTATGGTTCATTTGTTTGCTATGGGCCAATGGGCTGGGATCAACGTCTTAGCGCCATTCACAGTTAACGTTATTGAAATCATCGTCGGTAAGGACGTGAACATTCCGCTAATTACCGTCGCTATCGACATACAAAGAATAATATCGTCTCTATTCGCAGTTTACATCATAAAACGTATAAAGAGGAGAACTATGCTGTTTTCCACGTTAGGTTTGAACGCTGCTGTGATCTTCGTTACGGCCGCATACGTCTACTTCAAATCCCGCGGTCAATTGCCCTTCGACCATCCAATGATCGGGATAACTCTGATACTAATTCACATGCTCTCGGTAGCGACGGGCTCTCTGCCTTTACCCTATACGATAGCGGGCGAAATCTTCCCTCTGGAATACAGGAGTCTGTCGAGCGGGATAAGCGCTGTATTCTGTTCGATAAACATTTTTGTTTCCATCAAAACCTTACCGTATTTATTTAAAACGATTGGAATGCACGGAGCTTATTGCCTGTACGGCGTAATACTGGTCTATTGCTTGACCATAGCCTGGTTCTTCCTGCCAGAGACGAAGGATAGGACGCTGCAAGACATTGAGAACGAGTTCAGGGGGAAAGTGACGTATCCTGAGGATTTGAAGTCGGCGGAACCGTTGACGGTCTGGAAGAGTAATGAGGAGAAAGCTTAG

Protein

MVLEKWITPFKRQCFVVAGVSLNMSQLGMVFGYAAILVPQLRKSDSLIPIDEASESWVAALPGFALVLGNLVVPPVMAKFGRRIANIISIVIVLTGWISITLSTGLTLLLIGRFLQGLSVGMGSCLIPIMIGEYTSSTRRGQFSMCMSVIMGLGTLAVHTVGSYYSWKITALVCSTITFFDLIIVILSPESPSWLAAQGRYDECRRVFRLLRTIDEEEELDKMLAKSKELEDAKIIRTGFMVKVKGGFSYINKTITRKEFYKPIFIMVHLFAMGQWAGINVLAPFTVNVIEIIVGKDVNIPLITVAIDIQRIISSLFAVYIIKRIKRRTMLFSTLGLNAAVIFVTAAYVYFKSRGQLPFDHPMIGITLILIHMLSVATGSLPLPYTIAGEIFPLEYRSLSSGISAVFCSINIFVSIKTLPYLFKTIGMHGAYCLYGVILVYCLTIAWFFLPETKDRTLQDIENEFRGKVTYPEDLKSAEPLTVWKSNEEKA

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4S1   A0A2H1WVP2   A0A2W1BG84   A0A212F161   A0A2A4KAY2   A0A3S2P2D1   + More
H9J4R6   A0A0N1IHN6   A0A212FJ74   A0A194QPY2   A0A194QJ23   H9J4X1   H9J4X0   A0A0L7L8D8   A0A3S2NWF9   A0A2A4KA42   A0A2W1B9E8   A0A2H1V0I3   A0A023PNK9   H9J4X7   A0A2H1WB04   A0A2A4JTG8   A0A212F9B1   A0A0L7LQ31   A0A2H1WFL6   A0A2A4JUU3   A0A2W1BD78   A0A2A4J748   A0A2W1BFI0   A0A2H1W936   A0A3S2LUZ6   A0A0N1IPS2   A0A194QJ40   A0A2A4JT91   A0A0L7KZR3   H9J525   H9J4W9   A0A194QHU0   A0A194QJI7   A0A0N1I9K7   A0A2H1WAU6   A0A2A4JSU4   A0A2A4JU29   A0A194QKX0   A0A212FCC0   A0A0L7L8F3   H9J4T7   A0A0N1IIX6   H9J4S0   H9J4U8   E0X905   H9J4R7   A0A2H1W9B8   A0A194QJ80   A0A2A4JNG3   A0A194QJ47   D0PWZ5   A0A0N1IG19   A0A212F9C9   A0A194QJ30   H9J4X6   A0A3S2LEF2   A0A194QJJ6   H9J539   A0A0N0PE20   A0A2A4J655   A0A0L7LRT2   A0A212ENJ2   A0A2H1X0D6   A0A182WKH8   A0A194R9K8   A0A182MLS9   A0A336MJD0   A0A336M7L2   A0A0L7L7N1   A0A182NHP5   A0A182PHI4   A0A2H1WK46   A0A194QEH9   A0A194QJ63   A0A2H1WFM1   U4UB37   A0A182XN09   A0A182Y162   A0A182LJ94   A0A182KD28   A0A084VC86   H9J4X2   E0X906   A0A182VI49   A0A2H1WX63   B0W5I1   A0A182RRX2   A0A2A4KB29   A0A0N1IPZ8   A0A2W1BDG5   A0A2A4JU31   Q17LS5   H9J017  

Pubmed

19121390    28756777    22118469    26354079    26227816    24730650    + More
23537049    25244985    20966253    24438588    17510324   

EMBL

BABH01035527    BABH01035528    BABH01035529    ODYU01011356    SOQ57052.1    KZ150249    + More
PZC71836.1    AGBW02010956    OWR47467.1    NWSH01000008    PCG80953.1    RSAL01000045    RVE50592.1    BABH01035548    KQ460077    KPJ17887.1    AGBW02008317    OWR53759.1    KQ458671    KPJ05561.1    KPJ05558.1    BABH01025731    BABH01025733    JTDY01002352    KOB71610.1    RVE50589.1    PCG80949.1    PZC71838.1    ODYU01000118    SOQ34347.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    BABH01025717    ODYU01007347    SOQ50032.1    NWSH01000704    PCG74682.1    AGBW02009614    OWR50324.1    JTDY01000342    KOB77618.1    ODYU01008354    SOQ51875.1    NWSH01000578    PCG75536.1    PZC71835.1    NWSH01002771    PCG67556.1    KZ150133    PZC73021.1    ODYU01007122    SOQ49615.1    RSAL01000181    RVE44925.1    KPJ17881.1    KPJ05573.1    PCG74683.1    JTDY01004123    KOB68566.1    BABH01038881    KQ458981    KPJ04505.1    KPJ05554.1    KPJ17880.1    SOQ49614.1    PCG74684.1    PCG75537.1    KPJ05555.1    AGBW02009205    OWR51384.1    KOB71609.1    BABH01035469    KPJ17884.1    BABH01035538    BABH01035539    BABH01035543    GQ871755    ADM86146.1    BABH01035544    SOQ49613.1    KPJ05572.1    NWSH01001042    PCG72950.1    KPJ05583.1    FJ373021    ACQ66002.1    KPJ17891.1    OWR50323.1    KPJ05563.1    BABH01025720    RVE44926.1    KPJ05559.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    KQ460126    KPJ17588.1    PCG67555.1    JTDY01000230    KOB78170.1    AGBW02013662    OWR43027.1    ODYU01012470    SOQ58795.1    KQ460761    KPJ12541.1    AXCM01002831    UFQT01001316    SSX30005.1    UFQT01000224    SSX22028.1    JTDY01002470    KOB71349.1    ODYU01009098    SOQ53272.1    KQ459299    KPJ01871.1    KPJ05557.1    SOQ51878.1    KB632225    ERL90272.1    ATLV01010625    KE524589    KFB35580.1    BABH01025724    GQ871756    ADM86147.1    ODYU01011726    SOQ57638.1    DS231843    EDS35464.1    PCG80950.1    KPJ17883.1    PZC71834.1    PCG75535.1    CH477213    EAT47626.1    BABH01018801   

Proteomes

UP000005204    UP000007151    UP000218220    UP000283053    UP000053240    UP000053268    + More
UP000037510    UP000075920    UP000075883    UP000075884    UP000075885    UP000030742    UP000076407    UP000076408    UP000075882    UP000075881    UP000030765    UP000075903    UP000002320    UP000075900    UP000008820   

PRIDE

H9J4S1    H9J4R6    H9J4X1    H9J4X0    H9J4X7    H9J525    + More
H9J4W9    H9J4T7    H9J4S0    H9J4U8    E0X905    H9J4R7    D0PWZ5    H9J4X6    H9J539    H9J4X2    E0X906    H9J017   

Pfam

PF00083   Sugar_tr

Interpro

IPR036259   MFS_trans_sf        + More
IPR003663   Sugar/inositol_transpt       
IPR005828   MFS_sugar_transport-like       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4S1   A0A2H1WVP2   A0A2W1BG84   A0A212F161   A0A2A4KAY2   A0A3S2P2D1   + More
H9J4R6   A0A0N1IHN6   A0A212FJ74   A0A194QPY2   A0A194QJ23   H9J4X1   H9J4X0   A0A0L7L8D8   A0A3S2NWF9   A0A2A4KA42   A0A2W1B9E8   A0A2H1V0I3   A0A023PNK9   H9J4X7   A0A2H1WB04   A0A2A4JTG8   A0A212F9B1   A0A0L7LQ31   A0A2H1WFL6   A0A2A4JUU3   A0A2W1BD78   A0A2A4J748   A0A2W1BFI0   A0A2H1W936   A0A3S2LUZ6   A0A0N1IPS2   A0A194QJ40   A0A2A4JT91   A0A0L7KZR3   H9J525   H9J4W9   A0A194QHU0   A0A194QJI7   A0A0N1I9K7   A0A2H1WAU6   A0A2A4JSU4   A0A2A4JU29   A0A194QKX0   A0A212FCC0   A0A0L7L8F3   H9J4T7   A0A0N1IIX6   H9J4S0   H9J4U8   E0X905   H9J4R7   A0A2H1W9B8   A0A194QJ80   A0A2A4JNG3   A0A194QJ47   D0PWZ5   A0A0N1IG19   A0A212F9C9   A0A194QJ30   H9J4X6   A0A3S2LEF2   A0A194QJJ6   H9J539   A0A0N0PE20   A0A2A4J655   A0A0L7LRT2   A0A212ENJ2   A0A2H1X0D6   A0A182WKH8   A0A194R9K8   A0A182MLS9   A0A336MJD0   A0A336M7L2   A0A0L7L7N1   A0A182NHP5   A0A182PHI4   A0A2H1WK46   A0A194QEH9   A0A194QJ63   A0A2H1WFM1   U4UB37   A0A182XN09   A0A182Y162   A0A182LJ94   A0A182KD28   A0A084VC86   H9J4X2   E0X906   A0A182VI49   A0A2H1WX63   B0W5I1   A0A182RRX2   A0A2A4KB29   A0A0N1IPZ8   A0A2W1BDG5   A0A2A4JU31   Q17LS5   H9J017  

PDB

4LDS     E-value=6.53838e-18,     Score=223

KEGG

101744838    no KO assigned | (RefSeq) facilitated trehalose transporter Tret1-like

GO

GO:0022857   GO:0016021   GO:0008643   GO:0016020   GO:0022891   GO:0001678   GO:0005536   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

491

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

260.56606

Exp number, first 60 AAs:

26.95623

Total prob of N-in:

0.92312

POSSIBLE N-term signal

sequence

inside

1  -  15

TMhelix

16  -  38

outside

39  -  57

TMhelix

58  -  80

inside

81  -  86

TMhelix

87  -  109

outside

110  -  113

TMhelix

114  -  136

inside

137  -  142

TMhelix

143  -  165

outside

166  -  168

TMhelix

169  -  188

inside

189  -  262

TMhelix

263  -  285

outside

286  -  299

TMhelix

300  -  322

inside

323  -  328

TMhelix

329  -  351

outside

352  -  365

TMhelix

366  -  388

inside

389  -  400

TMhelix

401  -  423

outside

424  -  427

TMhelix

428  -  450

inside

451  -  491

 

 

Pi

259.056229

Theta

152.534331

Tajima's D

2.446954

CLR

0.291188

CSRT

0.939203039848008

Interpretation

Uncertain